CN188485
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: SKP1_YEAST (Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae GN=SKP1 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.275e-27 Identity = 75/194 (38.66%), Postives = 103/194 (53.09%), Query Frame = -3 Query: 171 SKKITLKSSDGEAFEVDEAVALESQTIKHMI---------------------------------EDDCADNGI--PLPNVTSKILSKVIEYCKKHVEASKSDDRAPSGVDDDLK------AWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWA 629 + + L S +GE F VD+ +A S +K+ + +DD D+ I P+PNV S +L KVIE+ + H D P DDD + +WD +F+KVDQ L+++ILAANYLNIK LLD C+ VA+MI+G++PEEIR+TFNI NDFTP EN+WA Sbjct: 3 TSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMHDSNLQNNSDSESDSDSETNHKSKDNNNGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHH-----RDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: ASK6_ARATH (SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.117e-23 Identity = 57/87 (65.52%), Postives = 68/87 (78.16%), Query Frame = -3 Query: 294 IKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRAPSGVDDDLKAWDTDFV-KVDQATLFDLILAANYLNIKSLLDLT 551 IK M EDDCADNGIPLPNVTSKIL VIEYCKKHV SK ++DLK WD +F+ K++Q+ LFD+++AANYLNI+SLLDLT Sbjct: 3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKHVVESK---------EEDLKKWDAEFMKKMEQSILFDVMMAANYLNIQSLLDLT 80
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: ASK21_ARATH (SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.977e-12 Identity = 46/141 (32.62%), Postives = 80/141 (56.74%), Query Frame = -3 Query: 213 ITLKSSDGEAFEVDEAVALESQTI-KHMIEDDCADN---GIPLPN-VTSKILSKVIEYCKKHVEASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 620 I L+++DG +V++ VA+ I + +I+ + I LP V +LS + +YC+ H + P + + K +D F+++D L +L AA+ L +K L+DLT + +A +I+GKTPEEIR+ F++ +D T Sbjct: 18 IWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDYCRFH--------QVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLT 150
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: ASK20_ARATH (SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.674e-11 Identity = 44/141 (31.21%), Postives = 80/141 (56.74%), Query Frame = -3 Query: 213 ITLKSSDGEAFEVDEAVALESQTI-KHMIEDDCA---DNGIPLPN-VTSKILSKVIEYCKKHVEASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 620 I L+++DG +V++ VA+ I + +I+ ++ I LP V + S +++YC+ H + P + + K +D F+++D L +L AA+ L +K L+DLT + +A +I+GK PEEIR+ F++ +D T Sbjct: 18 IWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDYCRFH--------QLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLT 150 The following BLAST results are available for this feature:
BLAST of CN188485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188485 ID=CN188485; Name=CN188485; organism=Citrus sinensis; type=EST; length=697bpback to top |