CX300694

Overview
NameCX300694
Unique NameCX300694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length464
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300694 vs. ExPASy Swiss-Prot
Match: FADA_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.988e-11
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1
Query:    1 EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 177
            +KIN+NGGA+A+GHPLG +GAR   TL++ M+   +D   G+ +MCIG G G A VFER
Sbjct:  330 DKINLNGGAIALGHPLGCSGARISTTLINLMEH--KDATLGLATMCIGLGQGIATVFER 386          
BLAST of CX300694 vs. ExPASy Swiss-Prot
Match: THLA_CLOAB (Acetyl-CoA acetyltransferase OS=Clostridium acetobutylicum GN=thlA PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.597e-11
Identity = 29/58 (50.00%), Postives = 44/58 (75.86%), Query Frame = 1
Query:    4 KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 177
            K+NVNGGA+A+GHP+G +GAR + TL+H M++  RD + G+ ++CIG G G A + E+
Sbjct:  336 KVNVNGGAIALGHPIGASGARILVTLVHAMQK--RDAKKGLATLCIGGGQGTAILLEK 391          
BLAST of CX300694 vs. ExPASy Swiss-Prot
Match: THIL_PARDE (Acetyl-CoA acetyltransferase OS=Paracoccus denitrificans GN=phaA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.597e-11
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 1
Query:    7 INVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 177
            +NVNGGA+AIGHP+G +G R + TLL EM+R  RD + G+ ++CIG GMG A   ER
Sbjct:  336 VNVNGGAIAIGHPIGASGCRILNTLLFEMQR--RDAKKGLATLCIGGGMGVALCLER 390          
BLAST of CX300694 vs. ExPASy Swiss-Prot
Match: THIC_HUMAN (Acetyl-CoA acetyltransferase, cytosolic OS=Homo sapiens GN=ACAT2 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 2.597e-11
Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 1
Query:    1 EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 177
            EK+N+ GGA+A+GHPLG +G R + TLLH ++R GR    GV ++CIG GMG A   +R
Sbjct:  340 EKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRS--RGVAALCIGGGMGIAMCVQR 396          
BLAST of CX300694 vs. ExPASy Swiss-Prot
Match: PCAF_PSEAE (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aeruginosa GN=pcaF PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.597e-11
Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 1
Query:    1 EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 177
            EK+N NGGA+A+GHPLG +GAR V T LH++++ G   R G+ +MC+G G G A   ER
Sbjct:  344 EKVNPNGGAIALGHPLGMSGARLVLTALHQLEKSGG--RRGLATMCVGVGQGLALAIER 400          
BLAST of CX300694 vs. ExPASy Swiss-Prot
Match: FADA_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.597e-11
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1
Query:    1 EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 177
            +KIN+NGGA+A+GHPLG +GAR   TL++ M+   +D   G+ +MCIG G G A VFER
Sbjct:  330 DKINLNGGAIALGHPLGCSGARISTTLINLME--DKDATLGLATMCIGLGQGIATVFER 386          
BLAST of CX300694 vs. ExPASy Swiss-Prot
Match: FADA_SHEPC (3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.597e-11
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1
Query:    1 EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 177
            +KIN+NGGA+A+GHPLG +GAR   TL++ M+   +D   G+ +MCIG G G A VFER
Sbjct:  330 DKINLNGGAIALGHPLGCSGARISTTLINLME--DKDATLGLATMCIGLGQGIATVFER 386          
BLAST of CX300694 vs. ExPASy Swiss-Prot
Match: FADA_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.597e-11
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1
Query:    1 EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 177
            +KIN+NGGA+A+GHPLG +GAR   TL++ M+   +D   G+ +MCIG G G A VFER
Sbjct:  330 DKINLNGGAIALGHPLGCSGARISTTLINLME--DKDATLGLATMCIGLGQGIATVFER 386          
BLAST of CX300694 vs. ExPASy Swiss-Prot
Match: FADA_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.597e-11
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1
Query:    1 EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 177
            +KIN+NGGA+A+GHPLG +GAR   TL++ M+   +D   G+ +MCIG G G A VFER
Sbjct:  330 DKINLNGGAIALGHPLGCSGARISTTLINLME--DKDATLGLATMCIGLGQGIATVFER 386          
BLAST of CX300694 vs. ExPASy Swiss-Prot
Match: FADA_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.597e-11
Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 1
Query:    1 EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 177
            +K+N+NGGA+A+GHPLG +GAR   TL++ M+   +D   G+ +MCIG G G A VFER
Sbjct:  330 DKVNLNGGAIALGHPLGCSGARISTTLINLMEH--KDATLGLATMCIGLGQGIATVFER 386          
The following BLAST results are available for this feature:
BLAST of CX300694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
FADA_SHESA1.988e-1154.243-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
THLA_CLOAB2.597e-1150.00Acetyl-CoA acetyltransferase OS=Clostridium acetob... [more]
THIL_PARDE2.597e-1156.14Acetyl-CoA acetyltransferase OS=Paracoccus denitri... [more]
THIC_HUMAN2.597e-1152.54Acetyl-CoA acetyltransferase, cytosolic OS=Homo sa... [more]
PCAF_PSEAE2.597e-1152.54Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aerugi... [more]
FADA_SHESW2.597e-1154.243-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_SHEPC2.597e-1154.243-ketoacyl-CoA thiolase OS=Shewanella putrefaciens... [more]
FADA_SHEB82.597e-1154.243-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADA_SHEB52.597e-1154.243-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADA_SHEAM2.597e-1152.543-ketoacyl-CoA thiolase OS=Shewanella amazonensis ... [more]

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Properties
Property NameValue
Genbank descriptionC08001C02SK PhyRootSw1 Citrus sinensis cDNA clone C08001C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300694 ID=CX300694; Name=CX300694; organism=Citrus sinensis; type=EST; length=464bp
GAAAAGATCAATGTGAATGGAGGTGCACTTGCCATTGGGCATCCTCTGGG
CACAACAGGTGCACGCTGTGTTGCAACTCTATTGCATGAGATGAAGAGGC
GAGGCAGAGACTGCCGCTTTGGAGTGATATCAATGTGCATAGGCACAGGA
ATGGGGGCAGCAGCTGTTTTCGAAAGAGGTGACTGTGCCGATGAGCTTTG
CAATGTCAGGAAAGTGGAAAGCAACAATTTCTTATCTAAGGATGTTCTGT
AGATTACCATTTGTCTGCTGCAGCATGTTCTTGTGGAACGATCATATTGT
GTTTGGAATCCGAGTATTTTTAATGAACAGTTATATGTAATAAGATTGCT
TTGTTGTGATCACAAAGCCGACCACAGGTCACACAGCTGTCTGTATCTTC
GGTTTTGATATGATTAATTTAAATATCGTCACACTTTATGAATGCCAAAA
AAAAAAAAAAAAAA
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