CN188471
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188471 vs. ExPASy Swiss-Prot
Match: RLA0_CAEEL (60S acidic ribosomal protein P0 OS=Caenorhabditis elegans GN=rpa-0 PE=1 SV=3) HSP 1 Score: 177.948 bits (450), Expect = 4.713e-44 Identity = 90/190 (47.37%), Postives = 127/190 (66.84%), Query Frame = -3 Query: 157 NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 726 NTG+ P +TSFFQ L IPTKI +GT+EI+ V LI++GDKVG+SE+ALL LG+ PFSYGLVV+ VY++G++Y+PEVLD++ ++L ++F SGV V +++LA++YPTLA+ H N +N++ VA T+ SF +A+ +K ++ADPSKF ESD DMGF LFD Sbjct: 127 NTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKF----AAAAPAAAAAPAAAAPAAKKEEPKEESDDDMGFGLFD 312
BLAST of CN188471 vs. ExPASy Swiss-Prot
Match: RLA0_SCHPO (60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe GN=rpp0 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.516e-42 Identity = 89/190 (46.84%), Postives = 121/190 (63.68%), Query Frame = -3 Query: 157 NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 726 NTG++P +TSFFQ L IPTKI +GT+EI + V L+ K KVG SEA LL L I PF+YG+ V ++Y+ G+V+SPE+LD+SE+DL+ S S++TA++L +YPT+ + H +NAYKN+VAV+LATEY+F ++ K +LADPS F ESD DMGF LFD Sbjct: 125 NTGMEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVGPSEATLLNMLNISPFTYGMDVLTIYDQGNVFSPEILDVSEEDLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATEYTFEGTEQTKAFLADPSAF--VVAAAPAAAAGGEAEAPAAEAAAEEEEESDEDMGFGLFD 312
BLAST of CN188471 vs. ExPASy Swiss-Prot
Match: RLA0_EIMTE (60S acidic ribosomal protein P0 OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.959e-38 Identity = 82/189 (43.39%), Postives = 116/189 (61.38%), Query Frame = -3 Query: 157 TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 723 TG+DP T FFQ L I TKI KG +EI V+LIR+G++V +S A LL KL ++PF+YGL V+ VY+NGSVYS VLD++++ ++E FA+G + V A++ A+ P+ AAAPH + A++N A+ L T + FPQ ++KE + +P+ F E DGDMGFSLFD Sbjct: 127 TGMDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYGLKVEHVYDNGSVYSASVLDITDEQILEAFAAGAANVAAVSRAVGLPSAAAAPHSILEAFRNCAALCLDTPFCFPQMQRLKEMVENPAAF-AAAAAPAAAAPAAAPAAAAKAPEPEEEEEEDGDMGFSLFD 314
BLAST of CN188471 vs. ExPASy Swiss-Prot
Match: RLA0_YEAST (60S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae GN=RPP0 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.610e-38 Identity = 78/190 (41.05%), Postives = 118/190 (62.11%), Query Frame = -3 Query: 157 NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 726 NTG++P +TSFFQ L +PTKI +GT+EI++ V+++ G+KVG SEA+LL L I PF++GL V VY+NG V+ +LD+++++LV F S VS + +++LAI YPTL + H IN YK+++AVA+A Y +P+ + + + + +P K+ ESD DMGF LFD Sbjct: 125 NTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYHYPEIEDLVDRIENPEKY--AAAAPAATSAASGDAAPAEEAAAEEEEESDDDMGFGLFD 312
BLAST of CN188471 vs. ExPASy Swiss-Prot
Match: RLA0_NEUCR (60S acidic ribosomal protein P0 OS=Neurospora crassa GN=crpp0 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.243e-36 Identity = 67/149 (44.97%), Postives = 110/149 (73.83%), Query Frame = -3 Query: 280 NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF 726 NTG++P +TSFFQ L +PTKI +GT+EI T ++L+ G KVG SEA LL L I PF+YG+ + VY+ G+ + +VLD+SE+ L++ F++ ++ + +L+LA+++PTL + H +NAYK V+AVA+ TE S+P+ +++K+ +A+P + Sbjct: 125 NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTFPSDVLDISEEQLLKAFSTAITTIASLSLALNFPTLPSVIHSVVNAYKKVLAVAIETEISWPEIEELKDRIANPEAY 273
BLAST of CN188471 vs. ExPASy Swiss-Prot
Match: RLA0_PODAN (60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.624e-36 Identity = 67/149 (44.97%), Postives = 109/149 (73.15%), Query Frame = -3 Query: 280 NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF 726 NTG++P +TSFFQ L +PTKI +GT+EI T ++L+ G KVG SEA LL L I PF+YG+ + VY+ G+ + VLD+SE+ L++ F+S ++ + A++LA+++PTL + H +N+YK V+AVA+ TE S+P+ +++K+ +A+P + Sbjct: 125 NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTFPSSVLDISEEQLLKAFSSAITTIAAVSLALNFPTLPSVIHSLVNSYKKVLAVAIETEISWPEIEELKDRIANPEAY 273
BLAST of CN188471 vs. ExPASy Swiss-Prot
Match: RLA0_DICDI (60S acidic ribosomal protein P0 OS=Dictyostelium discoideum GN=rplp0 PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.985e-34 Identity = 68/143 (47.55%), Postives = 101/143 (70.63%), Query Frame = -3 Query: 295 TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLA 723 TG++P+QTSF Q L I TKIN+G ++I+ V +I+ G KVG+SEA LL KL I+PF+YGL + +Y+ G+ YSP + SE+DL+ KF G+ + A++L I YPT+A+ PH +NA+KN++A++ T Y+F A+K K A Sbjct: 127 TGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSPSI---SEEDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFETSYTFDAAEKFKSAAA 266
BLAST of CN188471 vs. ExPASy Swiss-Prot
Match: RLA0_PLAF8 (60S acidic ribosomal protein P0 OS=Plasmodium falciparum (isolate 7G8) GN=RPLP0 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.089e-32 Identity = 75/189 (39.68%), Postives = 114/189 (60.32%), Query Frame = -3 Query: 157 TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 723 TG+DPS TSF + L I TKI KG +EI V LI++G+KV +S A LL K + P SYG+ V++VY++G +Y +VLD++++D++EKF+ GVS V AL+ A T A+ PH+F+ A+KN+VA+ + ++Y+FP +K+++ +P F E DG MGF +FD Sbjct: 129 TGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKWVENPEAFAAVAAPASAAKADEPKKEEAKKVEEEEEEEEDGFMGFGMFD 316
BLAST of CN188471 vs. ExPASy Swiss-Prot
Match: RLA0_TRYCR (60S acidic ribosomal protein P0 OS=Trypanosoma cruzi PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.246e-28 Identity = 66/138 (47.83%), Postives = 94/138 (68.12%), Query Frame = -3 Query: 316 NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKF-ASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQAD 726 NTG++P TSFFQ LNI TKI KGTVEI++ +++ GD+V +S A LL KL I PF Y + VQSV++ G ++ E L ++ DD+VEK+ G+S V AL+L PT A PHM ++A+K ++ ++ATEY F + D Sbjct: 134 NTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSIT-DDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLGASVATEYEFDEFD 270
BLAST of CN188471 vs. ExPASy Swiss-Prot
Match: RLA0_LEIIN (60S acidic ribosomal protein P0 OS=Leishmania infantum GN=LIPO-A PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.394e-26 Identity = 61/135 (45.19%), Postives = 91/135 (67.41%), Query Frame = -3 Query: 322 NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQ 726 +TG++P+QTSFFQ LNI TKI KG VEI+T +++ GDKV +S A LL KL I PF Y + V SV++ G +++ E L ++ED + + G+S V A+AL PT + M ++A+KN++AV++AT Y F + Sbjct: 134 STGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNISPFYYQVNVLSVWDRGVLFTREDLMMTEDMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFEE 268 The following BLAST results are available for this feature:
BLAST of CN188471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188471 ID=CN188471; Name=CN188471; organism=Citrus sinensis; type=EST; length=728bpback to top |