CN188467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188467 vs. ExPASy Swiss-Prot
Match: THIO_HUMAN (Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 5.298e-16 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = -1 Query: 169 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEK 426 A KL+VVDF+A+WC PCK++ P L++K VIFL+VDVD+ + VA E V+ MPTF K+G+ + GA K++L+ + + Sbjct: 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
BLAST of CN188467 vs. ExPASy Swiss-Prot
Match: THIO_BOVIN (Thioredoxin OS=Bos taurus GN=TXN PE=3 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 5.298e-16 Identity = 37/86 (43.02%), Postives = 58/86 (67.44%), Query Frame = -1 Query: 169 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEK 426 A +KL+VVDF+A+WC PCK++ P L++K V+FL+VDVD+ + VA E V+ MPTF K+G+ + GA K++L+ + + Sbjct: 18 AGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVAAECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
BLAST of CN188467 vs. ExPASy Swiss-Prot
Match: THIO_MACMU (Thioredoxin OS=Macaca mulatta GN=TXN PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 6.919e-16 Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = -1 Query: 169 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEK 426 A KL+VVDF+A+WC PCK++ P L++K V+FL+VDVD+ + VA E V+ MPTF K+G+ + GA K++L+ + + Sbjct: 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
BLAST of CN188467 vs. ExPASy Swiss-Prot
Match: THIO_CALJA (Thioredoxin OS=Callithrix jacchus GN=TXN PE=3 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 6.919e-16 Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = -1 Query: 169 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEK 426 A KL+VVDF+A+WC PCK++ P L++K V+FL+VDVD+ + VA E V+ MPTF K+G+ + GA K++L+ + + Sbjct: 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
BLAST of CN188467 vs. ExPASy Swiss-Prot
Match: THIO_RABIT (Thioredoxin OS=Oryctolagus cuniculus GN=TXN PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 9.037e-16 Identity = 36/86 (41.86%), Postives = 57/86 (66.28%), Query Frame = -1 Query: 169 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEK 426 A KL+VVDF+A+WC PCK++ P L++K V+F++VDVD+ K +A E V+ MPTF K+G+ + GA K++L+ + + Sbjct: 18 AGDKLVVVDFSATWCGPCKMIKPFFHALSEKFNNVVFIEVDVDDCKDIAAECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
BLAST of CN188467 vs. ExPASy Swiss-Prot
Match: THIO_RAT (Thioredoxin OS=Rattus norvegicus GN=Txn PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.180e-15 Identity = 40/97 (41.24%), Postives = 61/97 (62.89%), Query Frame = -1 Query: 163 EQLQKGIAAK--KLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKHA 447 E Q+ +AA KL+VVDF+A+WC PCK++ P L K V+FL+VDVD+ + VA + V+ MPTF K+G+ + GA K++L+ + + A Sbjct: 9 EAFQEALAAAGDKLVVVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDVDDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEATITEFA 105
BLAST of CN188467 vs. ExPASy Swiss-Prot
Match: THIO_GEOCY (Thioredoxin OS=Geodia cydonium GN=THIO PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.180e-15 Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = -1 Query: 166 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVL-ERIVGAKKDELQLAVEKH 426 A KL+V+DFTASWC PC+ ++P E+AK+ P VIF KVDVDE AE ++AMPTF K GK L + + GA + L+ ++K+ Sbjct: 18 AGDKLVVIDFTASWCGPCQRIAPKYVEMAKEFPDVIFYKVDVDENDETAEAEKIQAMPTFKFYKSGKALSDYVQGANEAGLREKIKKN 105
BLAST of CN188467 vs. ExPASy Swiss-Prot
Match: TRX3_YEAST (Thioredoxin-3, mitochondrial OS=Saccharomyces cerevisiae GN=TRX3 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 37/80 (46.25%), Postives = 56/80 (70.00%), Query Frame = -1 Query: 172 IVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVE 411 +V+DF A+WC PCK+M P L++L + P V F+K DVDE +A+E V AMPTFVL K+G+++ +I+GA L+ ++ Sbjct: 46 LVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQLIGKIIGANPTALEKGIK 125
BLAST of CN188467 vs. ExPASy Swiss-Prot
Match: THIO_ECHGR (Thioredoxin OS=Echinococcus granulosus GN=TRX PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 39/95 (41.05%), Postives = 62/95 (65.26%), Query Frame = -1 Query: 163 EQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKHA 447 + L+ I KL+V DF A+WC PCK ++P L +AK+ VIF+K+DVDE + VAE++ V AMPT ++ K G + +VGA + ++ ++ +A Sbjct: 13 DALEAAIKGDKLLVCDFFATWCGPCKSLAPKLDAMAKENEKVIFVKLDVDECQDVAEKYRVTAMPTLIVFKNGCEIGHVVGANEAGIRELIQANA 107
BLAST of CN188467 vs. ExPASy Swiss-Prot
Match: TRXL4_ARATH (Thioredoxin-like 4 OS=Arabidopsis thaliana GN=At1g11530 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.013e-15 Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = -1 Query: 172 QVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVE 483 +V+ + ESWN + + IV FTA WC P M+ ELA +FL VDVDE+K VA + V+AMPTF+ K+G ++++VGA DE++ V+ Sbjct: 3 RVVKIDSAESWNFYVSQAKNQNCPIVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVDVDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPDEIKKRVD 106 The following BLAST results are available for this feature:
BLAST of CN188467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188467 ID=CN188467; Name=CN188467; organism=Citrus sinensis; type=EST; length=546bpback to top |