CN188452

Overview
NameCN188452
Unique NameCN188452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length480
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1128..1607. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 5.507e-55
Identity = 106/161 (65.84%), Postives = 127/161 (78.88%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILAADES GT+GKRL+ I +EN + +RR  R+LLF T P   +++ G+I F ET+YQKT  G PFV ++K+ G+L GIKVDKG V LAGTNGE TTQGLDGLA+RC +Y + GA FAKWR VLKI PN PS+L+I ENAN LARYA ICQ+NGLVPIVEP
Sbjct:   29 GILAADESVGTMGKRLTQIGLENTDEHRRFYRQLLFTTDPSIKEHIGGIIFFHETMYQKTDGGVPFVKLVKDNGILVGIKVDKGVVPLAGTNGEGTTQGLDGLAERCAQYKKDGADFAKWRCVLKISPNTPSRLSIVENANVLARYATICQQNGLVPIVEP 189          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 209.92 bits (533), Expect = 4.662e-54
Identity = 107/161 (66.46%), Postives = 125/161 (77.64%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILAADES GT+G RL  INVEN E NRRA RE+LF +  ++ + + GVILF ETLYQK ++GKPF  ++KE G++ GIK+D GT  LAGTNGETT QGLD LA+RC +Y + GA F KWRAVLKI    PSQLAI ENAN LARYA ICQ+NGLVPIVEP
Sbjct:   29 GILAADESVGTMGNRLQRINVENTEENRRAFREILFSSDASISKSIGGVILFHETLYQKDSSGKPFPAIIKEKGMVVGIKLDAGTAPLAGTNGETTIQGLDKLAERCAQYKKDGADFGKWRAVLKISSTTPSQLAIQENANTLARYASICQQNGLVPIVEP 189          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 7.442e-52
Identity = 103/161 (63.98%), Postives = 123/161 (76.40%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILAADESTG++ KRL+ I VEN E NRR  R+LLF     + + + GVI F ETLYQK   G PF  ++K+ G++ GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR+VLKI    PS+LAI ENAN LARYA ICQ+NG+VPIVEP
Sbjct:   29 GILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFTADERMDKCIGGVIFFHETLYQKADDGTPFAKMIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISETSPSELAIMENANVLARYASICQQNGIVPIVEP 189          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 9.720e-52
Identity = 106/161 (65.84%), Postives = 120/161 (74.53%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEP
Sbjct:   29 GILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSSLAIMENANVLARYASICQQNGIVPIVEP 189          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 1.269e-51
Identity = 106/161 (65.84%), Postives = 120/161 (74.53%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEP
Sbjct:   29 GILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEP 189          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 201.83 bits (512), Expect = 1.269e-51
Identity = 106/161 (65.84%), Postives = 120/161 (74.53%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEP
Sbjct:   29 GILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEP 189          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 1.269e-51
Identity = 106/161 (65.84%), Postives = 120/161 (74.53%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEP
Sbjct:   29 GILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEP 189          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 1.269e-51
Identity = 106/161 (65.84%), Postives = 120/161 (74.53%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEP
Sbjct:   29 GILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEP 189          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 2.828e-51
Identity = 105/161 (65.22%), Postives = 119/161 (73.91%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILAADES GT+G RL  I VEN E NRR  RELLF    ++ Q + GVILF ETLYQK   GK F D+LKE G++ GIK+D+G   LAGTN ETT QGLDGL++RC +Y + GA F KWRAVLKI    PS LAI ENAN LARYA ICQ+NGLVPIVEP
Sbjct:   29 GILAADESVGTMGNRLQRIKVENTEENRRQFRELLFTVDSSVSQSIGGVILFHETLYQKDGQGKLFRDILKEKGIVVGIKLDQGVAPLAGTNKETTVQGLDGLSERCAQYKKDGADFGKWRAVLKIDNQCPSHLAIQENANTLARYASICQQNGLVPIVEP 189          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 4.824e-51
Identity = 105/160 (65.62%), Postives = 119/160 (74.38%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILA DES  T GKRL+SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VD+L E  ++PGIKVDKG V LAG+N E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS+LA+ E A GLARYA I Q+NGLVPIVEP
Sbjct:   58 GILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSI-PNGPSELAVKEAAWGLARYAAISQDNGLVPIVEP 216          
The following BLAST results are available for this feature:
BLAST of CN188452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF1_LAMJA5.507e-5565.84Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOB_CHICK4.662e-5466.46Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALDOC_CARAU7.442e-5263.98Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDOA_RAT9.720e-5265.84Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALDOA_RABIT1.269e-5165.84Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALDOA_PONAB1.269e-5165.84Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOA_MOUSE1.269e-5165.84Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOA_HUMAN1.269e-5165.84Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALDOB_BOVIN2.828e-5165.22Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALFC_ORYSJ4.824e-5165.63Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006A23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006A23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188452 ID=CN188452; Name=CN188452; organism=Citrus sinensis; type=EST; length=480bp
GGTATCCTTGCTGCTGATGAGTCAACAGGAACCATTGGCAAGCGTCTATC
CAGCATCAATGTTGAGAATGTTGAGGCAAACAGGCGTGCTCTCCGCGAGC
TCCTTTTCTGCACTCCCGGTGCCCTTCAGTACCTCAGTGGTGTCATCCTC
TTCGAGGAGACCCTCTACCAGAAGACTGCTGCTGGCAAGCCCTTTGTTGA
TGTCTTGAAGGAGGGTGGAGTCCTCCCTGGAATTAAGGTTGACAAGGGTA
CTGTTGAGCTTGCTGGTACCAATGGTGAGACCACCACCCAGGGTCTTGAT
GGCCTCGCCCAGCGCTGCCAGAAATACTATGAAGCTGGTGCTCGTTTTGC
CAAATGGCGTGCTGTTCTTAAGATTGGCCCTAATGAGCCTTCGCAGCTGG
CCATCAATGAGAATGCCAATGGCCTGGCCCGATATGCTATCATCTGCCAG
GAGAATGGCCTTGTTCCCATTGTTGAACCT
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