CN188452

Overview
NameCN188452
Unique NameCN188452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length480
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1128..1607. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 3.457e-49
Identity = 103/160 (64.38%), Postives = 117/160 (73.12%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILA DES  T GKRL+SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VDVL E G++PGIKVDKG + L G+N E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q+NGL PI+EP
Sbjct:   66 GILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAITQDNGLDPILEP 224          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 3.457e-49
Identity = 100/161 (62.11%), Postives = 119/161 (73.91%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILAADES G++ KRLS I VEN E NRR  R++LF     ++  + GVI F ETLYQK   G PF+  + + G++ GIKVDKG V LAGT+GETTTQGLDGL++RC +Y + GA FAKWR VLKI    PS LAI ENAN LARYA ICQ+NG+VPIVEP
Sbjct:   29 GILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFIRTILDKGIVVGIKVDKGVVPLAGTDGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKISERTPSALAILENANVLARYASICQQNGIVPIVEP 189          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 4.515e-49
Identity = 99/162 (61.11%), Postives = 124/162 (76.54%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGP--NEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILAADEST TI KR  +I +EN   NR + R+LLF T G  +++SG ILFEETL+QK  AG P V++L + G++PGIKVDKG V +  T+ E +TQGLDGLA+RC++YY+AGARFAKWRAVL I P   +P+ L+I E + GLARYA ICQ+N LVPIVEP
Sbjct:   24 GILAADESTQTIKKRFDNIKIENTVQNRASYRDLLFGTKGLGKFISGAILFEETLFQKNEAGVPLVNLLHDEGIIPGIKVDKGLVSIPCTDDEKSTQGLDGLAERCKEYYKAGARFAKWRAVLVIDPAKGKPTDLSIQEVSWGLARYASICQQNKLVPIVEP 185          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 5.897e-49
Identity = 102/160 (63.75%), Postives = 116/160 (72.50%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILA DES  T GKRL+SI +EN E NR+A R LL   P   +Y+SG ILFEETLYQ T  G+  VDVL E  ++PGIKVDKG V LAG+N E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q+NGLVPIVEP
Sbjct:   26 GILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAISQDNGLVPIVEP 184          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 5.897e-49
Identity = 102/160 (63.75%), Postives = 116/160 (72.50%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GI+A DES  T GKRL+SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VDVL E  ++PGIKVDKG V L G+  E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q++GLVPIVEP
Sbjct:   69 GIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAISQDSGLVPIVEP 227          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 7.702e-49
Identity = 100/160 (62.50%), Postives = 118/160 (73.75%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILA DES  T GKRL+SI ++N E NR+A R+LL  TPG   Y+SG ILFEETLYQ T  GK FVD L++  ++PGIKVDKG   LAG+N E+  QGLDGLA R  +YY+ GARFAKWR V+ + P  PS LA+ E A GLARYA I Q+NGLVPIVEP
Sbjct:   61 GILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSV-PCGPSALAVKEAAWGLARYAAISQDNGLVPIVEP 219          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.716e-48
Identity = 93/160 (58.13%), Postives = 114/160 (71.25%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GI+A DEST TI KR +S+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ QKT  G PF + +   G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY  GARFAKWRAV+ IG + PS   I  N++ LARYA +CQE GLVP+VEP
Sbjct:   19 GIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDGVPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANSHALARYAALCQEQGLVPMVEP 178          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 2.241e-48
Identity = 94/160 (58.75%), Postives = 112/160 (70.00%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GI+A DEST TI KR S + +EN E NRRA RELL  TP    Y+SG ILF+ET+ QKT  G PF   + + G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY  GARFAKWRAV+ IG + PS   I  NA+ LARYA +CQE GLVP+VEP
Sbjct:   19 GIIAIDESTSTIAKRFSGVGIENTEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDGVPFAKYMADHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANAHALARYAALCQEQGLVPMVEP 178          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 189.504 bits (480), Expect = 6.520e-48
Identity = 101/161 (62.73%), Postives = 115/161 (71.43%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 480
            GILAADES  T+GKRL  I VEN E NRRA R+LLF T P   + +SGVILF ETLYQK   G PF ++LK+ G++ GIKVDKG V L G+  E TTQGLD LA RC +Y + G  FAKWR VLKIG N PS  +I ENAN LARYA ICQ   +VPIVEP
Sbjct:   29 GILAADESGPTMGKRLQDIGVENTEDNRRAYRQLLFSTDPKLAENISGVILFHETLYQKADDGTPFAEILKKKGIILGIKVDKGVVPLFGSEDEVTTQGLDDLAARCAQYKKDGCDFAKWRCVLKIGKNTPSYQSILENANVLARYASICQSQRIVPIVEP 189          
BLAST of CN188452 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 8.515e-48
Identity = 100/162 (61.73%), Postives = 120/162 (74.07%), Query Frame = 1
Query:    1 GILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGL-ARYAIICQENGLVPIVEP 480
            GILAADESTG++ KRL+SI +EN E NRR  R+LLF     L +Y+SGVI+F ET YQKT  GKPF  +L+E G++PGIKVDKG V +AGT GE TTQGLD L  RC +Y + GA+FAKWR V KI    PS  A+ E A+ L +RYA ICQ+NGLVPIVEP
Sbjct:   29 GILAADESTGSMDKRLNSIGLENTEENRRKYRQLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEP 190          
The following BLAST results are available for this feature:
BLAST of CN188452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALFC_SPIOL3.457e-4964.38Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALDOC_PANTR3.457e-4962.11Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALF2_PLABA4.515e-4961.11Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALFC1_PEA5.897e-4963.75Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC1_ARATH5.897e-4963.75Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC3_ARATH7.702e-4962.50Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALF1_XANAC1.716e-4858.13Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP2.241e-4858.75Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_DROME6.520e-4862.73Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALF1_CAEEL8.515e-4861.73Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006A23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006A23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188452 ID=CN188452; Name=CN188452; organism=Citrus sinensis; type=EST; length=480bp
GGTATCCTTGCTGCTGATGAGTCAACAGGAACCATTGGCAAGCGTCTATC
CAGCATCAATGTTGAGAATGTTGAGGCAAACAGGCGTGCTCTCCGCGAGC
TCCTTTTCTGCACTCCCGGTGCCCTTCAGTACCTCAGTGGTGTCATCCTC
TTCGAGGAGACCCTCTACCAGAAGACTGCTGCTGGCAAGCCCTTTGTTGA
TGTCTTGAAGGAGGGTGGAGTCCTCCCTGGAATTAAGGTTGACAAGGGTA
CTGTTGAGCTTGCTGGTACCAATGGTGAGACCACCACCCAGGGTCTTGAT
GGCCTCGCCCAGCGCTGCCAGAAATACTATGAAGCTGGTGCTCGTTTTGC
CAAATGGCGTGCTGTTCTTAAGATTGGCCCTAATGAGCCTTCGCAGCTGG
CCATCAATGAGAATGCCAATGGCCTGGCCCGATATGCTATCATCTGCCAG
GAGAATGGCCTTGTTCCCATTGTTGAACCT
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