CN188450
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188450 vs. ExPASy Swiss-Prot
Match: ARFRP_MOUSE (ADP-ribosylation factor-related protein 1 OS=Mus musculus GN=Arfrp1 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.194e-22 Identity = 60/179 (33.52%), Postives = 100/179 (55.87%), Query Frame = -3 Query: 282 FAKKEMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEI-------TDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 764 F K E IL++GLD AGKTT L YK + L +I TT+ G N+ TV+ WD+GGQ++++ LW Y+ G+I+V+DS D +R+ E+++ ++++ + L +LV ANKQD+ ++ +I T K+G +R Q+ A +G+G+ EG++W+ Sbjct: 13 FQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV---GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVSSEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCKIG-----RRDCLTQACSALTGKGVREGIEWM 183
BLAST of CN188450 vs. ExPASy Swiss-Prot
Match: ARFRP_HUMAN (ADP-ribosylation factor-related protein 1 OS=Homo sapiens GN=ARFRP1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.194e-22 Identity = 60/179 (33.52%), Postives = 98/179 (54.75%), Query Frame = -3 Query: 282 FAKKEMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEI-------TDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 764 F K E IL++GLD AGKTT L YK + L +I TT+ G N+ TV+ WD+GGQ++++ LW Y+ G+I+V+DS D +R+ E++ +++ + L +LV ANKQD+ ++ +I T K+G +R Q+ A +G+G+ EG++W+ Sbjct: 13 FQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV---GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIG-----RRDCLTQACSALTGKGVREGIEWM 183
BLAST of CN188450 vs. ExPASy Swiss-Prot
Match: SAR1_CHAGB (Small COPII coat GTPase SAR1 OS=Chaetomium globosum GN=SAR1 PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 8.089e-22 Identity = 58/171 (33.92%), Postives = 92/171 (53.80%), Query Frame = -3 Query: 276 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLG-----------LHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 755 K ++L +GLD AGKTT+L+ LK + PT+ E + N+ FT +D+GG + R LW+ YF G++F+VD+ D +R EA+ EL +L+ +EL +V NK D P+A++ E+ +LG L +R ++ S G G +G+ WLS+ Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSIGNVRFTTFDLGGHQQARRLWKDYFPEVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVVLGNKIDHPDAVSEDELRHQLGMYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--DGIRWLSH 187
BLAST of CN188450 vs. ExPASy Swiss-Prot
Match: ARD1_CAEEL (Putative GTP-binding protein ard-1 homolog OS=Caenorhabditis elegans GN=arc-1 PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 8.089e-22 Identity = 48/116 (41.38%), Postives = 77/116 (66.38%), Query Frame = -3 Query: 414 EMRILMVGLDAAGKTTILYKLKLGEIVTTI---PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQD 752 E R++++GLD AGKT+I+ +LK ++ T + PTIGFN+ET+ YKN WDVGG K+R LW+HY+ N Q + +V+D +R EA EL+R++++ + ++V N++D Sbjct: 369 ESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYKNYRLNFWDVGGLPKLRHLWKHYYSNAQAIFYVIDGYAVERFSEAIKELNRVMSDPLVGTCPVIVAVNRKD 484
BLAST of CN188450 vs. ExPASy Swiss-Prot
Match: SAR1_NEUCR (Small COPII coat GTPase sar-1 OS=Neurospora crassa GN=sar-1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 57/173 (32.95%), Postives = 91/173 (52.60%), Query Frame = -3 Query: 270 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLG-----------LHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 755 K ++L +GLD AGKTT+L+ LK + PT+ E + N+ FT +D+GG + R LW+ YF G++F+VD+ D +R+ EA+ E+ +L+ +EL +V NK D P A++ E+ +LG L +R ++ S G G E + WLS + Sbjct: 19 KHGKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSVGNVKFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHERLPEAKAEIDALLSMEELAKVPFVVLGNKIDHPEAVSEDELRQRLGLWQTTGKGRVPLEGIRPIEVFMCSVVMRQGYG--EAIRWLSQYV 189
BLAST of CN188450 vs. ExPASy Swiss-Prot
Match: SAR1_NEOFI (Small COPII coat GTPase sar1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sar1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 59/173 (34.10%), Postives = 91/173 (52.60%), Query Frame = -3 Query: 270 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 755 K ++L +GLD AGKTT+L+ LK + T PT E + N FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL +L +EL L+ NK D P+A++ E+ +LGL+ +R ++ S G G EG+ WLS + Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189
BLAST of CN188450 vs. ExPASy Swiss-Prot
Match: SAR1_ASPFU (Small COPII coat GTPase sar1 OS=Aspergillus fumigatus GN=sar1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 59/173 (34.10%), Postives = 91/173 (52.60%), Query Frame = -3 Query: 270 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 755 K ++L +GLD AGKTT+L+ LK + T PT E + N FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL +L +EL L+ NK D P+A++ E+ +LGL+ +R ++ S G G EG+ WLS + Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189
BLAST of CN188450 vs. ExPASy Swiss-Prot
Match: SAR1_ASPCL (Small COPII coat GTPase sar1 OS=Aspergillus clavatus GN=sar1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 59/173 (34.10%), Postives = 91/173 (52.60%), Query Frame = -3 Query: 270 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 755 K ++L +GLD AGKTT+L+ LK + T PT E + N FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL +L +EL L+ NK D P+A++ E+ +LGL+ +R ++ S G G EG+ WLS + Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189
BLAST of CN188450 vs. ExPASy Swiss-Prot
Match: SAR1_CRYNE (Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans GN=SAR1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.354e-21 Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = -3 Query: 270 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 755 K ++L +GLD AGKTT+L+ LK + T PT+ E + N+ FT +D+GG + R LWR YF G++F+VDS D +R E++ EL +L+ + L L+ NK D A++ ++ +LGL+ +R ++ S G G EG WLS I Sbjct: 19 KSAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGNVKFTTYDLGGHIQARRLWRDYFPEVDGIVFLVDSADAERFAESKAELDSLLSIESLAQVPFLILGNKIDAYGAVSEEQLRHELGLYQTTGKGKIPLRDIRPIEVFMCSVVMRQGYG--EGFRWLSQYI 189
BLAST of CN188450 vs. ExPASy Swiss-Prot
Match: ARL3_YEAST (ADP-ribosylation factor-like protein 3 OS=Saccharomyces cerevisiae GN=ARL3 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.354e-21 Identity = 60/170 (35.29%), Postives = 96/170 (56.47%), Query Frame = -3 Query: 282 KKEMRILMVGLDAAGKTTIL------YKLKLGEIVTTIPTIGFNVET--VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAM---NAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 758 K++ IL++GLD AGKTT L Y L + PT+G NV T V+ K I WDVGGQ+ +R +W Y+ G+IF+VDS+DR+R+ E L ++ ++E+ +L+ ANKQD + M + E+ +K+ H + R + A +GEG+ + ++W+ Sbjct: 15 KEQYSILILGLDNAGKTTFLETLKKEYSLAFKALEKIQPTVGQNVATIPVDSKQI-LKFWDVGGQESLRSMWSEYYSLCHGIIFIVDSSDRERLDECSTTLQSVVMDEEIEGVPILMLANKQDRQDRMEVQDIKEVFNKIAEH-ISARDSRVLPISALTGEGVKDAIEWM 182 The following BLAST results are available for this feature:
BLAST of CN188450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188450 ID=CN188450; Name=CN188450; organism=Citrus sinensis; type=EST; length=820bpback to top |