CK939890

Overview
NameCK939890
Unique NameCK939890
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939890 vs. ExPASy Swiss-Prot
Match: PDIA3_CERAE (Protein disulfide-isomerase A3 OS=Cercopithecus aethiops GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.829e-18
Identity = 52/128 (40.62%), Postives = 75/128 (58.59%), Query Frame = 3
Query:  198 VIELDESNFDSAIS---SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVEN 569
            V+EL + NF+S +S   S   +LV+F+APWCGHCKRLAP+ + AA    +LK  + +AKVD    +   +K  +  +PTLKIF  G     Y GPR A+ +V +LKK   P    L ++ E   F+ +
Sbjct:   27 VLELTDDNFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAA---TRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISD 151          
BLAST of CK939890 vs. ExPASy Swiss-Prot
Match: PDIA3_RAT (Protein disulfide-isomerase A3 OS=Rattus norvegicus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.389e-18
Identity = 52/128 (40.62%), Postives = 75/128 (58.59%), Query Frame = 3
Query:  198 VIELDESNFDSAIS---SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVEN 569
            V+EL + NF+S +S   S   +LV+F+APWCGHCKRLAP+ + AA    +LK  + +AKVD    +   +K  +  +PTLKIF  G     Y GPR A+ +V +LKK   P    L ++ E   F+ +
Sbjct:   27 VLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAA---TRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEDEFKKFISD 151          
BLAST of CK939890 vs. ExPASy Swiss-Prot
Match: PDIA3_BOVIN (Protein disulfide-isomerase A3 OS=Bos taurus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.389e-18
Identity = 52/128 (40.62%), Postives = 76/128 (59.38%), Query Frame = 3
Query:  198 VIELDESNFDSAIS---SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVEN 569
            V+EL + NF+S I+   S   +LV+F+APWCGHCK+LAP+ + AA    +LK  + +AKVD    +   +K  +  +PTLKIF  G  +  Y GPR A+ +V +LKK   P    L S+ E   F+ +
Sbjct:   27 VLELTDDNFESRITDTGSSGLMLVEFFAPWCGHCKKLAPEYEAAA---TRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEESGAYDGPRTADGIVSHLKKQAGPASVPLKSEEEFEKFISD 151          
BLAST of CK939890 vs. ExPASy Swiss-Prot
Match: PDIA2_PONAB (Protein disulfide-isomerase A2 OS=Pongo abelii GN=PDIA2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.389e-18
Identity = 56/160 (35.00%), Postives = 81/160 (50.62%), Query Frame = 3
Query:  168 EETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHG---IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDKSVMSNLAL 638
            EE   K DG ++ L       A+     +LV+FYAPWCGHC+ LAP+  +AA +LA     +++AKVD      LA +  +  +PTLK F  G    P EY GPR+AE +  +L++ V P    L  +A     ++        F     D+ V + LAL
Sbjct:   35 EEEIPKEDG-ILVLSRHTLGLALREHPALLVEFYAPWCGHCQALAPEYSKAAAVLAAESSVVMLAKVDGPAQPELAEEFGVTEYPTLKFFRDGNRTHPEEYTGPREAEGIAEWLRRRVGPSAMRLEDEAAAQALIDGRDLVVIGFFQDLHDEDVATFLAL 193          
BLAST of CK939890 vs. ExPASy Swiss-Prot
Match: PDIA3_CHICK (Protein disulfide-isomerase A3 OS=Gallus gallus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.120e-18
Identity = 56/142 (39.44%), Postives = 82/142 (57.75%), Query Frame = 3
Query:  198 VIELDESNFDSAISSFD-YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDKS 617
            V+EL +++F+S ++     +LV+F+APWCGHCKRLAP+ + AA    +LK  + + KVD    S   +K  +  +PTLKIF  G  +  Y GPR A+ +V +LKK   P    L+S   V+DF +  G      +GF  D S
Sbjct:   27 VVELSDADFESGLAERPGLVLVEFFAPWCGHCKRLAPEYEAAA---TRLKGIVPLVKVDCTANSNTCNKYGVSGYPTLKIFRDGEESGTYDGPRTADGIVSHLKKQAGPASVALSS---VADFEKFIGDKDASVVGFFRDAS 162          

HSP 2 Score: 70.0922 bits (170), Expect = 1.658e-11
Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 3
Query:  189 DGKVIELDESNFDSAISSFDY-ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHG---IPTEYYGPRKAELLVRYLKK 506
            DG V  +   NFD  +++ D  +L++FYAPWCGHCK L P+  E    L+K    IVIAK+DA   + + S  E+  FPT+     G    P +Y G R+    + YLK+
Sbjct:  373 DGPVKVVVAENFDEIVNAEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSK-DPNIVIAKMDATA-NDVPSPYEVRGFPTIYFAPAGKKQSPKKYEGGREVSDFISYLKR 480          
BLAST of CK939890 vs. ExPASy Swiss-Prot
Match: PDI1_DICDI (Protein disulfide-isomerase 1 OS=Dictyostelium discoideum GN=pdi1 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.075e-18
Identity = 46/126 (36.51%), Postives = 67/126 (53.17%), Query Frame = 3
Query:  189 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR--LASKQEIDAFPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSD 557
            +G V+ L   NFD+ +     + V FYAPWCGHCK+LAP  +  A   A +   +VIAKVD D+     L SK ++  +PTLKIF       +Y G R  + L+ Y+      +V +  + + V D
Sbjct:   21 EGNVVVLSPDNFDTVVDGSKTVFVKFYAPWCGHCKKLAPDFEILADTFAPVSNKVVIAKVDCDQADNKALCSKYDVSGYPTLKIFDKSTTAKDYNGARSVDELLTYINNHAKTNVKVKKAPSNVVD 146          

HSP 2 Score: 71.2478 bits (173), Expect = 7.444e-12
Identity = 42/113 (37.17%), Postives = 58/113 (51.33%), Query Frame = 3
Query:  183 KIDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR--LASKQEIDAFPTLKIF--MHGIPTEYYGPRKAELLVRYLKK 506
            K    V++L  SNFDS +      +LV+FYAPWCGHCK+L P  +      A  K+ +VIAK+D D      + SK  +  FPTLK F        +Y   R  +  + Y+ K
Sbjct:  139 KAPSNVVDLSPSNFDSVVLDKSKNVLVEFYAPWCGHCKKLMPDYEILGNTYANEKD-VVIAKIDCDAADNKAICSKYGVTGFPTLKWFGKQSKDGEKYEQGRDLDTFINYINK 250          
BLAST of CK939890 vs. ExPASy Swiss-Prot
Match: PDIA2_HUMAN (Protein disulfide-isomerase A2 OS=Homo sapiens GN=PDIA2 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.186e-17
Identity = 56/160 (35.00%), Postives = 79/160 (49.38%), Query Frame = 3
Query:  168 EETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHG---IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDKSVMSNLAL 638
            EE   K DG ++ L       A+     +LV+FYAPWCGHC+ LAP+  +AA +LA     + +AKVD      LA +  +  +PTLK F +G    P EY GPR AE +  +L++ V P    L  +A     +         F     D+ V + LAL
Sbjct:   35 EEEIPKEDG-ILVLSRHTLGLALREHPALLVEFYAPWCGHCQALAPEYSKAAAVLAAESMVVTLAKVDGPAQRELAEEFGVTEYPTLKFFRNGNRTHPEEYTGPRDAEGIAEWLRRRVGPSAMRLEDEAAAQALIGGRDLVVIGFFQDLQDEDVATFLAL 193          
BLAST of CK939890 vs. ExPASy Swiss-Prot
Match: PDI1_SCHPO (Putative protein disulfide-isomerase C1F5.02 OS=Schizosaccharomyces pombe GN=SPAC1F5.02 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.022e-17
Identity = 48/132 (36.36%), Postives = 79/132 (59.85%), Query Frame = 3
Query:  180 FKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIP-TEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENA 572
            F    +V ++++   +  I++   ++V FYAPWCGHCK LAP+ + AA  L   K+ I + +VD  +   L S+  I  +PTL +F +G   ++Y GPRK + LV+Y++K + P V  ++ D  + +FVE A
Sbjct:   18 FCASAEVPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELE--KDGISLVEVDCTEEGDLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTVKPISKDT-LENFVEKA 146          
BLAST of CK939890 vs. ExPASy Swiss-Prot
Match: PDI_ASPNG (Protein disulfide-isomerase OS=Aspergillus niger GN=pdiA PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.884e-17
Identity = 48/120 (40.00%), Postives = 69/120 (57.50%), Query Frame = 3
Query:  189 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTE--YYGPRKAELLVRYLKKFVAPDVSILNSD 542
            +  VI LD+  F+S ++    +L +F+APWCGHCK LAP+ +EAA  L     P+V  KVD      L   Q ++ +PTLKIF  G+ +   Y G R+ E +V Y+ K   P VS +N +
Sbjct:   24 ESDVISLDQDTFESFMNEHGLVLAEFFAPWCGHCKALAPKYEEAATELKAKNIPLV--KVDCTAEEDLCRSQGVEGYPTLKIF-RGVDSSKPYQGARQTESIVSYMIKQSLPAVSSVNEE 140          

HSP 2 Score: 72.0182 bits (175), Expect = 4.364e-12
Identity = 44/114 (38.60%), Postives = 60/114 (52.63%), Query Frame = 3
Query:  225 DSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILA---KLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGI---PTEYYGPRKAELLVRYLKKFVAPDVSILNSDAE 548
            D  I +   +L++FYAPWCGHCK LAP+ DE A + A    L   + IAK+DA           I  FPTL+++  G    P EY G R  E L  ++K+    +V  LN  +E
Sbjct:  371 DLVIDNDKDVLLEFYAPWCGHCKALAPKYDELAALYADHPDLAAKVTIAKIDATAND---VPDPITGFPTLRLYPAGAKDSPIEYSGSRTVEDLANFVKENGKHNVDALNVASE 481          
BLAST of CK939890 vs. ExPASy Swiss-Prot
Match: PDI_YEAST (Protein disulfide-isomerase OS=Saccharomyces cerevisiae GN=PDI1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.685e-17
Identity = 48/151 (31.79%), Postives = 85/151 (56.29%), Query Frame = 3
Query:  162 SEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMH---GIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFG 605
            +++E     D  V++L   +F+  I S D +L +F+APWCGHCK +AP+  +AA  L  +++ I +A++D  +   L  +  I  FP+LKIF +       +Y GPR AE +V+++ K   P V+++   A++  ++ N     P+ +  G
Sbjct:   22 AQQEAVAPEDSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETL--VEKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVV---ADLPAYLANETFVTPVIVQSG 167          
The following BLAST results are available for this feature:
BLAST of CK939890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PDIA3_CERAE1.829e-1840.63Protein disulfide-isomerase A3 OS=Cercopithecus ae... [more]
PDIA3_RAT2.389e-1840.63Protein disulfide-isomerase A3 OS=Rattus norvegicu... [more]
PDIA3_BOVIN2.389e-1840.63Protein disulfide-isomerase A3 OS=Bos taurus GN=PD... [more]
PDIA2_PONAB2.389e-1835.00Protein disulfide-isomerase A2 OS=Pongo abelii GN=... [more]
PDIA3_CHICK3.120e-1839.44Protein disulfide-isomerase A3 OS=Gallus gallus GN... [more]
PDI1_DICDI4.075e-1836.51Protein disulfide-isomerase 1 OS=Dictyostelium dis... [more]
PDIA2_HUMAN1.186e-1735.00Protein disulfide-isomerase A2 OS=Homo sapiens GN=... [more]
PDI1_SCHPO2.022e-1736.36Putative protein disulfide-isomerase C1F5.02 OS=Sc... [more]
PDI_ASPNG5.884e-1740.00Protein disulfide-isomerase OS=Aspergillus niger G... [more]
PDI_YEAST7.685e-1731.79Protein disulfide-isomerase OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004744_B06 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IVF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939890 ID=CK939890; Name=CK939890; organism=Citrus sinensis; type=EST; length=809bp
GGGGAATCGATTGCATTCCATTTTGCTCAAAGCGAAACTGAAAACAAATC
ACATCGAAATTGAAGATGCGAGGGATGAGTAAAGGTAGAATATGGATCTT
ATTGTGTCTGTTGTTATTGACAGGAAGAGGTATGATGTTATTGACAGGAA
GAGGCTTGTCTTCGGAAGAAGAAACAAAATTCAAAATTGACGGGAAAGTA
ATAGAACTTGACGAATCCAACTTCGATTCTGCAATCTCGTCTTTTGATTA
CATTTTAGTCGATTTTTACGCTCCTTGGTGCGGTCACTGCAAGCGCCTCG
CTCCTCAGCTAGACGAAGCTGCTCCGATACTTGCTAAATTGAAAGAGCCA
ATTGTAATAGCAAAAGTAGACGCTGACAAGTACAGCCGTCTTGCTAGTAA
GCAAGAGATTGATGCATTTCCTACATTGAAGATATTTATGCATGGGATTC
CTACGGAATATTATGGACCTAGAAAAGCAGAATTGCTTGTTCGTTATCTT
AAGAAATTTGTTGCCCCTGATGTCTCCATTCTTAATTCAGATGCGGAAGT
TTCTGACTTTGTTGAAAATGCTGGTACTTTCTTTCCCCTATTTATTGGTT
TTGGGTTGGATAAATCAGTCATGTCAAACTTAGCTTTGAAGTATAAGAAA
AAGGCCTGGTTTGCTGTCGCTAAGGATTTCTCTGAGGACACCATGGTGTT
GTATGATTTTGACAAAGTTCCGGCTTTGGTTGCTCTTCAGCCGAGTTACA
ATGAGCACAACATTTTTTATGNNNNCTTTGATGAGGAGTTTTTGGAGGAG
TTTATAAAA
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