CN188416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_LODEL (Protein transport protein SEC13 OS=Lodderomyces elongisporus GN=SEC13 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.311e-41 Identity = 84/156 (53.85%), Postives = 102/156 (65.38%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE-GNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 I HED +HD +D+YGKRLAT SSD +IKI + + + L ATL GH GP+WQVAWAHPKFGSILASCSYDG+V+IWKE + W+ H++SVNS++WAPHELG L C SSDG +SV DG D AH +GV S P Sbjct: 4 IGNAHEDLIHDAVLDYYGKRLATCSSDKTIKIYDIEGTENYKLTATLTGHEGPIWQVAWAHPKFGSILASCSYDGKVLIWKEQQDTQQWSIIAEHTIHQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFNDDGTTSHVIFD-AHAIGVNSASWAP 158
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_ASPNC (Protein transport protein sec13 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec13 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 6.777e-41 Identity = 84/168 (50.00%), Postives = 110/168 (65.48%), Query Frame = 1 Query: 184 MPAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN--------DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 M AQ I +GH++ +HD +D+YG+RLAT SSD +IKI + + + TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E +QN WT+ F+ H +SVN ++WAPHE G LAC SSDG++SV D W T +I AH +GV S+ P Sbjct: 1 MAAQVISNSGHDEMIHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNATSPVAGGAWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVL-EFRDNSW-THQIFHAHGMGVNSISWAP 166 HSP 2 Score: 22.7126 bits (47), Expect = 6.777e-41 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 650 SWAPAMAPGA 679 SWAPA APG+ Sbjct: 163 SWAPAAAPGS 172
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_EMENI (Protein transport protein sec13 OS=Emericella nidulans GN=sec13 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 8.830e-41 Identity = 81/160 (50.62%), Postives = 106/160 (66.25%), Query Frame = 1 Query: 205 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND--------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 +GH+D +HD +D+YG+RLAT SSD +IKI + + + TLKGH GPVW V WAHPKFG+ILAS SYDG+V+IW+E +Q+ WT+ F+ H +SVN I+WAPHE G LAC SSDG++SV D W T +I AH +GV S+ P Sbjct: 10 SGHDDMIHDAGLDYYGRRLATCSSDKTIKIFEIEGDTHKLVETLKGHEGPVWCVEWAHPKFGTILASSSYDGKVLIWREQHQSSTAPIGSGAWTKVFDFSLHTASVNMISWAPHETGCLLACASSDGHVSVL-EFRDNSW-THQIFHAHGMGVNSISWAP 167 HSP 2 Score: 21.557 bits (44), Expect = 8.830e-41 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 650 SWAPAMAPGA 679 SWAPA +PG+ Sbjct: 164 SWAPAASPGS 173
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_PICPG (Protein transport protein SEC13 OS=Pichia pastoris (strain GS115) GN=SEC13 PE=3 SV=3) HSP 1 Score: 164.081 bits (414), Expect = 6.244e-40 Identity = 79/154 (51.30%), Postives = 100/154 (64.94%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 I H+D +HD +D+YG+RLAT SSD +IKI + + + TL GH GPVWQVAWAHPKFG ILASCSYDG+V+IWKE N W + + H++SVNS++WAPHE G L C SSDG IS+ DGG + Q H +GV + P Sbjct: 4 IGNAHDDLIHDAVLDYYGRRLATCSSDKTIKIFEIDGENQRLVETLIGHEGPVWQVAWAHPKFGVILASCSYDGKVLIWKEDN-GVWNKVAEHSVHQASVNSVSWAPHEYGPVLLCASSDGKISI-VEFKDGGALEPIVIQGHAIGVNAASWAP 155
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_CANAL (Protein transport protein SEC13 OS=Candida albicans GN=SEC13 PE=1 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.817e-39 Identity = 81/156 (51.92%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ-NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 I H+D +HD +D+YGKRLAT SSD +IKI L + + L TL GH GPVWQV+WAHPKFGSILASCSYDG+ +IWKE + W+ H++SVNS++WAPHELG L C SSDG +SV DG D AH +G S P Sbjct: 4 IGNAHDDLIHDAVLDYYGKRLATCSSDKTIKIFDLDGTDNYKLITTLTGHEGPVWQVSWAHPKFGSILASCSYDGKALIWKEQPETQQWSIIAEHTVHQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFNDDGTTSHVIFD-AHAIGANSATWAP 158
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_DEBHA (Protein transport protein SEC13 OS=Debaryomyces hansenii GN=SEC13 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.373e-39 Identity = 81/156 (51.92%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ-NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 I H+D +HD +D+YGKRLAT SSD +IK+ + + + L TL GH GPVWQVAWAHPKFGSILASCSYDG+ +IWKE + W+ H++SVNS++WAPHELG L C SSDG +SV DG D AH +GV S P Sbjct: 4 IGNAHDDLIHDAVLDYYGKRLATCSSDKTIKLFEVEGTENYKLVETLIGHEGPVWQVAWAHPKFGSILASCSYDGKALIWKEQPETQQWSIIAEHTVHQASVNSVSWAPHELGAILLCTSSDGKVSVVDFNDDGTTSHIIFD-AHAIGVNSASWAP 158
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_NEUCR (Protein transport protein sec-13 OS=Neurospora crassa GN=sec-13 PE=3 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 3.099e-39 Identity = 77/152 (50.66%), Postives = 101/152 (66.45%), Query Frame = 1 Query: 205 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 +GH+D +HD +D+YG+RLAT SSD +IKI + + + + TLKGH G VW VAWAHPK+G+ILAS YDG+V+IW+E W + F HK+SVN ++W+PHE G LAC SSDGN+SV D W+ I AH +GV SV P Sbjct: 11 SGHDDMIHDAVLDYYGRRLATCSSDRTIKIFEIEGESQRLVETLKGHDGAVWSVAWAHPKYGNILASAGYDGKVLIWRE-QAGSWQRIFDFALHKASVNIVSWSPHEAGCLLACASSDGNVSVL-EFKDNSWE-HNIFHAHGLGVNSVSWAP 159
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_PICST (Protein transport protein SEC13 OS=Pichia stipitis GN=SEC13 PE=3 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 5.286e-39 Identity = 80/156 (51.28%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ-NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 I H D +HD +D+YGKRLAT SSD SI I + + S L +TL GH GPVWQV+WAHPKFGSILASCS+DG+ +IWKE + W+ + H++SVNS++WAPHELG L C SSDG +SV DG D AH +G S P Sbjct: 4 IGNAHNDLIHDAVLDYYGKRLATCSSDKSINIFDIDGTESYKLVSTLTGHDGPVWQVSWAHPKFGSILASCSFDGKALIWKEQPETQQWSIIAEHSVHQASVNSVSWAPHELGAVLLCASSDGKVSVVDFNDDGTTSHVVFD-AHAIGANSASWAP 158
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SC131_CANGA (Protein transport protein SEC13-1 OS=Candida glabrata GN=SEC131 PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.178e-38 Identity = 78/155 (50.32%), Postives = 98/155 (63.23%), Query Frame = 1 Query: 196 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 +I H D +HD +D+YGK+LAT SSD +IKI + + + + TL GH GPVW+V WAHPKFG+ILASCSYDG+VIIWKE N W+Q H +SVNS+ WAPHE G L SSDG +SV + G T I AH +GV + P Sbjct: 3 EIANAHNDLIHDAVLDYYGKKLATCSSDKTIKIFEVEGESHKLVDTLVGHEGPVWRVDWAHPKFGTILASCSYDGKVIIWKEENDR-WSQIAVHAVHTASVNSVQWAPHEYGALLLAASSDGKVSV-VEFKENGTATPLIFDAHAIGVNAASWAP 155
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_ASHGO (Protein transport protein SEC13 OS=Ashbya gossypii GN=SEC13 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.623e-38 Identity = 77/154 (50.00%), Postives = 97/154 (62.99%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 I H + +HD +D+YGKRLAT SSD +I+I + + + + +L GH GPVWQV WAHPKFG ILASCSYDG+V+IWKE N W+Q + H +SVNS+ WAPHE G L C SSDG SV +G ID AH +GV + P Sbjct: 4 ITNAHTELIHDAVLDYYGKRLATCSSDKTIQIFEVDGDSHKLVDSLHGHEGPVWQVDWAHPKFGVILASCSYDGKVLIWKEEN-GRWSQIAAYEVHSASVNSVKWAPHEYGPLLLCSSSDGKFSVVEFKENGTTSPIIID-AHAIGVNAACWAP 155 The following BLAST results are available for this feature:
BLAST of CN188416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188416 ID=CN188416; Name=CN188416; organism=Citrus sinensis; type=EST; length=680bpback to top |