CN188416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEH1_YEAST (Nucleoporin SEH1 OS=Saccharomyces cerevisiae GN=SEH1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 193 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSAS--QHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA 582 Q ++GH+D VHDV DFYG+ +AT SSD IK+ L S + + + H + + WA P++G I+AS SYD V +W+E + W + T ND K S+ S+ +AP LGL LAC +DG + ++ A Sbjct: 2 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDA 139
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEH1_SCHPO (Nucleoporin seh1 OS=Schizosaccharomyces pombe GN=seh1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18 Identity = 48/141 (34.04%), Postives = 76/141 (53.90%), Query Frame = 1 Query: 190 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRG--PVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN----DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADG 594 A I+T H+D V+DV DFYG+R+ + S+D +K+ ++ T + G + +VAWAHP FG +LA CS D V I++E +N W + D +S+V I++ P + G LA S+D + ++ A G Sbjct: 6 ATTIQTNHQDLVNDVTYDFYGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMRVAWAHPSFGQVLAVCSLDRGVRIYEEQKKNFESKTWVEVAKLMDARSAVLDISFCPFQHGCKLAAVSADATLRIYEAMEPG 146
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: CIAO1_AEDAE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Aedes aegypti GN=Ciao1 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16 Identity = 54/158 (34.18%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTRIDQAHPVGVTSV-FMGPGN 666 + GH T+ DVA G+ LA+AS D+++ I + + ATL+GH V V+W+ K GS+LA+CS D V +W+ ++++ A N H V + W PHE LA S D I ++ AD W + +H V S+ F G GN Sbjct: 55 LSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWS--KSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHE--DILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGN 208
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: CIAO1_CULQU (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Culex quinquefasciatus GN=Ciao1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 50/156 (32.05%), Postives = 78/156 (50.00%), Query Frame = 1 Query: 184 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTRIDQAHPVGVTSV 648 +P + GH T+ DVA G+ LA+AS D+++ I + + ATL+GH V V+W+ K G++LA+CS D V IW+ ++++ A N H V + W P+E LA S D I ++ AD W + +H V S+ Sbjct: 50 VPKTVLSDGHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWS--KSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNE--DVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSI 201
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: CIAO1_DROWI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila willistoni GN=Ciao1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.450e-14 Identity = 49/151 (32.45%), Postives = 74/151 (49.01%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGVTSV 648 + GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+ K G +LA+CS D V IW+ +++ A N H V + W H LA S D I +F +A D WD T +H V S+ Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--KSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKEILASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSI 200
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: CIAO1_DROPS (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila pseudoobscura pseudoobscura GN=Ciao1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 47/151 (31.13%), Postives = 73/151 (48.34%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAHPVGVTSV 648 + GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+ + G +LA+CS D V IW+ +++ A N H V + W H LA S D I +F + D WD T +H V S+ Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVW--HPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSI 200
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: CIAO1_DROPE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila persimilis GN=Ciao1 PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 47/151 (31.13%), Postives = 73/151 (48.34%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAHPVGVTSV 648 + GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+ + G +LA+CS D V IW+ +++ A N H V + W H LA S D I +F + D WD T +H V S+ Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVW--HPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSI 200
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: CIAO1_DROAN (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila ananassae GN=Ciao1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 49/152 (32.24%), Postives = 73/152 (48.03%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGVTSV 648 + GH+ T+ ++ G+ LA+AS D + I S+ + ATL+GH V V+W+ + G +LA+CS D V IW+ +++ A N H V + W P EL LA S D I +F A D WD +H V S+ Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEL---LASASYDNTIKMFAEDALDSDWDCVATLSSHTSTVWSI 200
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: CIAO1_DROVI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila virilis GN=Ciao1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.110e-12 Identity = 49/151 (32.45%), Postives = 73/151 (48.34%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGVTSV 648 + GH+ T+ +V G+ LA+AS D++ I S + ATL+GH V V+W+ + G +LA+CS D V IW+ +++ A N H V + W H LA S D I +F +A D WD T +H V S+ Sbjct: 54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIW----SKHECTATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVW--HPTKEVLASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSI 196
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: CIO1B_SALSA (Probable cytosolic iron-sulfur protein assembly protein ciao1-B OS=Salmo salar GN=ciao1b PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 51/155 (32.90%), Postives = 72/155 (46.45%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 ++ GH+ TV VA G LA+AS D++ I N + L L+GH V VAWA G++LA+CS D V IW+ +N++ N H V + W P EL LA S D N+ V+ D W+ + H V + P Sbjct: 56 LQDGHQRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWA--PSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQEL---LASCSYDNNVCVY-KEEDDDWECRATLEGHTSTVWGLTFDP 204 The following BLAST results are available for this feature:
BLAST of CN188416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188416 ID=CN188416; Name=CN188416; organism=Citrus sinensis; type=EST; length=680bpback to top |