CN188416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: CIAO1_DICDI (Probable cytosolic iron-sulfur protein assembly protein OS=Dictyostelium discoideum GN=ciao1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 45/134 (33.58%), Postives = 65/134 (48.51%), Query Frame = 1 Query: 208 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQ--HLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWD 603 GHE TV VA G+ LA AS D+S I S + H+++L+GH V VAW G++LA+CS D + IW+ + ND+ + H + + W P+E L SS + F DG W+ Sbjct: 67 GHEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAW--DSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNE---ELLASSSYDDTIKFWKDIDGDWE 195
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: CIO1A_SALSA (Probable cytosolic iron-sulfur protein assembly protein ciao1-A OS=Salmo salar GN=ciao1a PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 49/155 (31.61%), Postives = 70/155 (45.16%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 ++ GH+ V VA G LA+AS D++ I N + L L+GH V VAWA G+ LA+CS D V IW+ ++++ N H V + W P EL LA S D N+ V+ D W+ + H V + P Sbjct: 56 LQDGHQRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWA--PSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQEL---LASCSYDNNVCVY-KEEDDDWECRATLEGHTSTVWGLTFDP 204
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: CIAO1_BOVIN (Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Bos taurus GN=CIAO1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 45/151 (29.80%), Postives = 69/151 (45.70%), Query Frame = 1 Query: 208 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 GH+ TV VA G LA+AS D++ I + + + TL+GH V VAWA G++LA+CS D V +W+ ++++ N H V + W P + LA S D + ++ D W + H V S+ P Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWA--PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ--ELLASASYDDTVKLYREEED-DWVCCATLEGHESTVWSLAFDP 204 The following BLAST results are available for this feature:
BLAST of CN188416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188416 ID=CN188416; Name=CN188416; organism=Citrus sinensis; type=EST; length=680bpback to top |