CN188415

Overview
NameCN188415
Unique NameCN188415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_ASPCL (Protein transport protein sec13 OS=Aspergillus clavatus GN=sec13 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.534e-29
Identity = 73/159 (45.91%), Postives = 99/159 (62.26%), Query Frame = -2
Query:  271 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQ-KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738
            I  AH +GV S+SWAPA APG+L+        Q +  + G DN +K+W         +    L+ HSDWVR VAW+P++ L KS IASASQD TV IWT  A    QW  + L +F T +W VSWS +GN+LAV+  +N V+LWKE + G+W++V  +E
Sbjct:  138 IFHAHGMGVNSISWAPAAAPGSLISSNPGPGQQRRFVTGGSDNLLKIWDYNPESKTYNITQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKVKDIE 294          
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_ASPOR (Protein transport protein sec13 OS=Aspergillus oryzae GN=sec13 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.839e-29
Identity = 71/159 (44.65%), Postives = 99/159 (62.26%), Query Frame = -2
Query:  271 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQK-LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738
            I  AH +GV S+SWAPA +PG+L+        Q+   + G DN +K+W   +     +    L+ HSDWVR VAW+P++ L KS IASASQD TV IWT       QW  + L +F T +W VSWS +GN+LAV+  +N V+LWKE + G+W++V  +E
Sbjct:  137 IFHAHGMGVNSISWAPAASPGSLISANPGPGQQRRFVTGGSDNLLKIWDYNSETKSYNLSQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRIWTSDVSNPGQWASQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKVKDIE 293          
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_ASPTN (Protein transport protein sec13 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sec13 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.285e-28
Identity = 72/159 (45.28%), Postives = 99/159 (62.26%), Query Frame = -2
Query:  271 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQ-KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738
            I  AH +GV S+SWAPA APG+L+        Q +  + G DN +K+W         +    L+ HSDWVR VAW+P++ L KS IASASQD TV IWT  A    QW  + L +F + +W VSWS +GN+LAV+  +N V+LWKE + G+W++V  +E
Sbjct:  152 IFHAHGMGVNSISWAPAAAPGSLISANPGPGQQRRFVTGGSDNLLKIWDYNPETKTYNLSQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDSVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKVKDIE 308          
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_ASPNC (Protein transport protein sec13 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec13 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.285e-28
Identity = 73/159 (45.91%), Postives = 99/159 (62.26%), Query Frame = -2
Query:  271 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQ-KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738
            I  AH +GV S+SWAPA APG+L+        Q +  + G DN +K+W         +    L+ HSDWVR VAW+P++ L KS IASASQD TV IWT  A    QW  + L +F T +W VSWS +GN+LAV+  +N V+LWKE + G+W++V  +E
Sbjct:  151 IFHAHGMGVNSISWAPAAAPGSLISSNPGPGQQRRFVTGGSDNLLKIWDYNPETKTYNNTQTLEGHSDWVRDVAWSPSV-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKVKDIE 307          
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_ASPFU (Protein transport protein sec13 OS=Aspergillus fumigatus GN=sec13 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28
Identity = 72/159 (45.28%), Postives = 99/159 (62.26%), Query Frame = -2
Query:  271 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQ-KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738
            I  AH +GV S+SWAPA +PG+L+        Q +  + G DN +K+W         +    L+ HSDWVR VAW+P++ L KS IASASQD TV IWT  A    QW  + L +F T +W VSWS +GN+LAV+  +N V+LWKE + G+W++V  +E
Sbjct:  149 IFHAHGMGVNSISWAPAASPGSLISSNPGPGQQRRFVTGGSDNLLKIWDYNPESKTYNLSQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKVKDIE 305          
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_PICPG (Protein transport protein SEC13 OS=Pichia pastoris (strain GS115) GN=SEC13 PE=3 SV=3)

HSP 1 Score: 125.946 bits (315), Expect = 2.192e-28
Identity = 68/157 (43.31%), Postives = 91/157 (57.96%), Query Frame = -2
Query:  271 QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 732
            Q H +GV + SWAP   P         D  ++  S GCDN VK+W+  +         A Q HSDWVR VAW+P+  L KS IA+ASQD TV+IWT   +  +WE + L   K P   W  SWSL+GN+LA++  +N VTLWKE + G+W+    V+
Sbjct:  142 QGHAIGVNAASWAPISLP---------DNTRRFVSGGCDNLVKIWRYDDAAKTFIEEEAFQGHSDWVRDVAWSPSR-LSKSYIATASQDRTVLIWTKDGKSNKWEKQPLTKEKFPDVCWRASWSLSGNVLAISGGDNKVTLWKENIQGKWESAGEVD 288          
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_CHAGB (Protein transport protein SEC13 OS=Chaetomium globosum GN=SEC13 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.329e-28
Identity = 75/163 (46.01%), Postives = 99/163 (60.74%), Query Frame = -2
Query:  271 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPV---QKLASCGCDNTVKVWKM--YNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEG-EQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738
            I  AH +GV SVSWAPA  PG++V           ++  + G DN +K+W      G +K++  P L  H+DWVR VAW+P + L KS IASAS+D TV IWT      +QW  +VL  F   VW VSWSL+GN+LA +  +N VTLWKE + GEW+ V  +E
Sbjct:  130 IFHAHGLGVNSVSWAPATNPGSIVSSKPSPKSTGNRRFVTGGSDNALKIWAFDAATGAYKLEREP-LTGHTDWVRDVAWSPTV-LQKSYIASASEDRTVRIWTSDPANPQQWNCKVL-GFDAAVWRVSWSLSGNVLAASGGDNKVTLWKENLKGEWECVKSIE 289          
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_LODEL (Protein transport protein SEC13 OS=Lodderomyces elongisporus GN=SEC13 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.856e-27
Identity = 69/161 (42.86%), Postives = 95/161 (59.01%), Query Frame = -2
Query:  271 IDQAHPVGVTSVSWAPAMAPGALVG--LGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738
            I  AH +GV S SWAP  A  +        L   ++  +CG DN VK+WK    +        L+ H+DWVR VAW+P+  L +  IA+ASQD TV+IWT  K+G+ W+ + L + K P   W  SWSL+GN+LAV+  +N VTLWKE + G+W+    VE
Sbjct:  143 IFDAHAIGVNSASWAPFTAASSTSSKDANTLKQHRRFVTCGSDNLVKIWKYDTALETYAEEAKLEGHTDWVRDVAWSPS-NLVRPYIATASQDCTVLIWTQDKDGK-WQSQPLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVTLWKENLQGKWESAGEVE 301          
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_COCIM (Protein transport protein SEC13 OS=Coccidioides immitis GN=SEC13 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.134e-27
Identity = 68/159 (42.77%), Postives = 96/159 (60.38%), Query Frame = -2
Query:  271 IDQAHPVGVTSVSWAPAMAPGALV-GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738
            I  AH +GV SVSWAPA APG+++        +++  + G DN VK+W              L+ H+ WVR V+W+P++ L +S IASASQD TV IWT       +W    L +F   VW VSWSL+GN+LAV+  +N V+LWKE + G+W++V  +E
Sbjct:  147 IFHAHGMGVNSVSWAPAAAPGSVISATPSTGQIRRFVTGGSDNLVKIWDYNPETKTYATSHVLEGHTGWVRDVSWSPSI-LSRSYIASASQDKTVRIWTSDPSNPNEWTSHQL-EFDAVVWRVSWSLSGNILAVSGGDNKVSLWKENLKGQWEKVKDIE 303          
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_YEAST (Protein transport protein SEC13 OS=Saccharomyces cerevisiae GN=SEC13 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.500e-26
Identity = 67/158 (42.41%), Postives = 92/158 (58.23%), Query Frame = -2
Query:  274 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 738
            I  AH +GV S SWAPA         G  +  +K  + G DN VK+WK  +          L+ HSDWVR VAW+P + L +S +AS SQD T +IWT   E   W+  +LK+ K P  +W  SWSL+GN+LA++  +N VTLWKE ++G+W+    V
Sbjct:  140 IIDAHAIGVNSASWAPATIEEDGEHNGTKES-RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV-LLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEV 295          
The following BLAST results are available for this feature:
BLAST of CN188415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
SEC13_ASPCL7.534e-2945.91Protein transport protein sec13 OS=Aspergillus cla... [more]
SEC13_ASPOR9.839e-2944.65Protein transport protein sec13 OS=Aspergillus ory... [more]
SEC13_ASPTN1.285e-2845.28Protein transport protein sec13 OS=Aspergillus ter... [more]
SEC13_ASPNC1.285e-2845.91Protein transport protein sec13 OS=Aspergillus nig... [more]
SEC13_ASPFU1.678e-2845.28Protein transport protein sec13 OS=Aspergillus fum... [more]
SEC13_PICPG2.192e-2843.31Protein transport protein SEC13 OS=Pichia pastoris... [more]
SEC13_CHAGB8.329e-2846.01Protein transport protein SEC13 OS=Chaetomium glob... [more]
SEC13_LODEL1.856e-2742.86Protein transport protein SEC13 OS=Lodderomyces el... [more]
SEC13_COCIM4.134e-2742.77Protein transport protein SEC13 OS=Coccidioides im... [more]
SEC13_YEAST3.500e-2642.41Protein transport protein SEC13 OS=Saccharomyces c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006A02_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188415 ID=CN188415; Name=CN188415; organism=Citrus sinensis; type=EST; length=739bp
CCCTTTTCAGATAAGAGTTCATATGTAATTTAACAGAAATATTGGCAGTC
ACAACCCTTAACGTATGGATGGAGATTAAGACACCATCATTTGTTCCTGA
ATCTGGCAAGAAAGAATAACAACTAACCAAATACAAATTAAGTATTCAAA
CAAAATCAATCCAACCCAAAAAAAAACTAAACCAGGTGTAAGAAAGGCTA
CTTCCAATAAGTCCAAAAGAGAACACAATGATTGTGAAAGGGTAAGTAGG
AAGACACCTTATGTCTGTGGCTCGACTACACTCACTTGTTGCCACTCACC
ATCAACAGCTTCCTTCCACAATGTCACATTATTTGCATCAGCCACAGCCA
ACAAATTTCCAGTCAGTGACCACGAAACACTCCAAACTGGTGTCTTAAAA
TCCTTCAAAACTCGACCCTCCCATTGCTCCCCTTCCTTGGCACAGGTCCA
AATAACAACTGTCCCATCCTGTGATGCACTTGCAATTGTGGATTTTGGAA
GACCCAAGTTGGGTGCCCATGCCACGCTCCGCACCCAATCACTGTGCATC
TGAAGGGCAGGGAAGCAATCCATCTTCCAAATCCCATTATACATCTTCCA
CACCTTTACAGTATTATCACAACCACAAGAAGCCAATTTCTGAACAGGAT
CCAGTAAGCCCAATCCAACTAAAGCACCAGGAGCCATTGCCGGGGCCCAT
GAAACAGATGTTACTCCGACTGGATGGGCCTGGTCTATC
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