CN188415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_SCHPO (Protein transport protein sec13 OS=Schizosaccharomyces pombe GN=sec13 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.571e-26 Identity = 68/151 (45.03%), Postives = 90/151 (59.60%), Query Frame = -2 Query: 289 AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGE-QWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQ 729 AH G +V W+P G++VG +KLA+ GCDN VK+W G+ L H DW R VAWAP++GL K+ +ASASQD V IWT KEG+ W+ L + K P W VSWSL+GN+LAV+ +N V L+KE+ +WQ Sbjct: 143 AHEPGCNAVCWSPPSLSGSVVGQSPAAGPKKLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWT--KEGDGPWQKTPLTEEKFPDIAWRVSWSLSGNILAVSCGDNKVYLFKES-QNKWQ 290
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_PHANO (Protein transport protein SEC13 OS=Phaeosphaeria nodorum GN=SEC13 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.963e-25 Identity = 70/159 (44.03%), Postives = 91/159 (57.23%), Query Frame = -2 Query: 271 IDQAHPVGVTSVSWAPAMAPGALVGL--GLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738 I QA GV SVSWAPA+APG +V ++ + G D VK+W L H+DWVR VAW+P + L KS IASASQD TV IWT + + W+ VL + W VSWSL+GN+LAV+ +N V+LWKE + G W+ V +E Sbjct: 146 IFQACGSGVNSVSWAPAVAPGQVVSASGNQAGAARRFVTGGSDCQVKLWDFSAETGSWQSTQILTGHTDWVRDVAWSPTV-LSKSYIASASQDKTVRIWT-SSDLRDWKSTVL-NVDAVAWRVSWSLSGNVLAVSTGDNRVSLWKERLSGGWECVKTIE 301
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_CANAL (Protein transport protein SEC13 OS=Candida albicans GN=SEC13 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.963e-25 Identity = 65/161 (40.37%), Postives = 96/161 (59.63%), Query Frame = -2 Query: 271 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKM--YNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738 I AH +G S +WAP L +++ SCG DN K+WK N + + L+ H+DWVR VAW+P+ L +S IA+ASQD TV+IWT ++G +W+ ++L + K P W SWSL+GN+LAV+ +N V+LWKE + G+W+ V+ Sbjct: 143 IFDAHAIGANSATWAPVSTSSK--DSAALKQQRRIVSCGSDNLAKIWKYDAANNTYVEEA--KLEGHTDWVRDVAWSPS-NLIRSYIATASQDRTVLIWTQDRDG-KWQKQLLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEVD 297
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_KLULA (Protein transport protein SEC13 OS=Kluyveromyces lactis GN=SEC13 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.053e-25 Identity = 63/162 (38.89%), Postives = 92/162 (56.79%), Query Frame = -2 Query: 274 IDQAHPVGVTSVSWAPA----MAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 738 I AH +G + WAPA + G V++ + G DN VK+WK + L+ HSDWVR VAW+P + L +S +AS SQD T +IWT + + W+ +LK+ K P +W SWSL+GN+LA++ +N VTLWKE ++G+W+ V Sbjct: 140 IIDAHSIGANTACWAPATLQQQSNQGTSGSASPQQVRRFVTGGADNLVKIWKYNSDAATYLLEHTLEGHSDWVRDVAWSPTV-LSRSYLASVSQDRTCIIWTQDSKEDTWKKTLLKEDKFPDVLWRASWSLSGNILALSCGDNTVTLWKENLEGKWEPAGQV 300
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_ASHGO (Protein transport protein SEC13 OS=Ashbya gossypii GN=SEC13 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.470e-24 Identity = 61/159 (38.36%), Postives = 92/159 (57.86%), Query Frame = -2 Query: 271 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738 I AH +GV + WAPA ++++A+ G DN VK+WK L H+DWVR VAW+P++ LP++ +A+ SQD T +IWT W +LK+ K P +W SWSL+GN+LA++ +N VTLWKE ++G+W+ + +E Sbjct: 140 IIDAHAIGVNAACWAPATIED---DGQQSQHLRRIATGGADNLVKIWKYNPEANTYLLEDTLAAHADWVRDVAWSPSV-LPRAYLATVSQDRTCIIWTQENNQGPWTKTLLKEDKFPDVLWRASWSLSGNILALSGGDNKVTLWKENLEGKWESAAEIE 294
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_PICST (Protein transport protein SEC13 OS=Pichia stipitis GN=SEC13 PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.275e-24 Identity = 64/159 (40.25%), Postives = 95/159 (59.75%), Query Frame = -2 Query: 274 AHPVGVTSVSWAPAMAPGA--LVGLGLLDPVQKLASCGCDNTVKVWKM--YNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 729 AH +G S SWAP + + L ++ +CG DN K+WK N + + L+ H+DWVR VAW+P++ L ++ IA+ASQD TV+IWT K G +W+ ++L + K P W SWSL+GN+LAV+ +N V+LWKE + G+W+ V Sbjct: 146 AHAIGANSASWAPLSSTPSPNQKDAASLKQQRRFVTCGSDNLAKIWKYDAANNTYVEEA--RLEGHTDWVRDVAWSPSM-LVRTYIATASQDRTVLIWTQDKAG-KWQKQLLTEDKFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEV 300
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_DEBHA (Protein transport protein SEC13 OS=Debaryomyces hansenii GN=SEC13 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.278e-24 Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = -2 Query: 271 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKD--FKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738 I AH +GV S SWAP ++ G + +++ +CG DN K+WK + L+ H+DWVR V W+P++ L +S IA+ASQD TV+IW+ G+ W+ ++L + F W SWSL+GN+LAV+ +N V+LWKE + G+W+ VE Sbjct: 143 IFDAHAIGVNSASWAP-LSNNNTKGKDT-NSIRRFVTCGSDNLAKIWKFDSSKNAYIEEAVLEGHTDWVRDVCWSPSI-LIRSYIATASQDRTVLIWSQDNNGK-WQKQLLTEEMFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEVE 297
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SC131_CANGA (Protein transport protein SEC13-1 OS=Candida glabrata GN=SEC131 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.587e-24 Identity = 63/158 (39.87%), Postives = 87/158 (55.06%), Query Frame = -2 Query: 274 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVL--KDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 738 I AH +GV + SWAPA G V++ + G DN VK+W+ L+ HSDWVR VAW+P++ L +S IAS SQD T IWT W L ++F +W SWSL+GN+LA++ +N VTLWKE ++G+W+ V Sbjct: 140 IFDAHAIGVNAASWAPATVEGGNNPGEAPKEVRRFVTGGADNLVKIWRYNPETQSYLVEDTLEGHSDWVRDVAWSPSV-LLRSYIASVSQDRTCNIWTQEDNTGPWVKTQLTPEEFPDVLWRASWSLSGNILAISGGDNKVTLWKENLNGKWESAGEV 296
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_PICGU (Protein transport protein SEC13 OS=Pichia guilliermondii GN=SEC13 PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.347e-22 Identity = 62/159 (38.99%), Postives = 89/159 (55.97%), Query Frame = -2 Query: 271 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKD--FKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738 I +AH +GV S SWAP + PV++ + G DN KVW + L+ H+DWVR V W+P+ L +S IA+ASQD TV+IW EG+ W+ + L + F W SWS +GN+LAV+ +N V+LWKE + G+W+ V+ Sbjct: 142 IFEAHKIGVNSASWAP---------VDTKSPVRRFVTGGSDNLAKVWSLDASKSTYVEEAKLEGHTDWVRDVCWSPS-ALVRSYIATASQDRTVLIWHQDGEGK-WQKQKLTEELFPDVCWRCSWSFSGNILAVSGGDNKVSLWKENLQGKWESAGEVD 289
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_CRYNE (Protein transport protein SEC13 OS=Cryptococcus neoformans GN=SEC13 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22 Identity = 63/167 (37.72%), Postives = 85/167 (50.90%), Query Frame = -2 Query: 280 AHPVGVTSVSWAPAMAPGALVGLGL-------LDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVL---------KDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVS 729 AH G ++SWAP++ + G+ L P ++ + G DN +++W K ++ H DWVR VAWAPN+GLP IASASQD TV+I + W L F VW VSWSL GN+LAV+ + V+LWKE V W+ VS Sbjct: 170 AHGTGANAISWAPSVL-STVSGVSRSQQPSNSLAPQKRFVTAGSDNLIRIWGFDEEQKKWTEEETIKGHEDWVRDVAWAPNIGLPGMYIASASQDRTVLIHSRPSPSSSWTSAPLLPSLPQSQDPHFPDAVWRVSWSLAGNVLAVSCGDGKVSLWKEGVGKGWECVS 335 The following BLAST results are available for this feature:
BLAST of CN188415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188415 ID=CN188415; Name=CN188415; organism=Citrus sinensis; type=EST; length=739bpback to top |