CN188414

Overview
NameCN188414
Unique NameCN188414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 4.579e-32
Identity = 72/176 (40.91%), Postives = 105/176 (59.66%), Query Frame = 2
Query:   56 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL--CAAVQQPISVGMVGSASDFQLYTSGI---YNGDCSNDPYYIDHAVLIVGYG 568
            E P   DWR++  VT VK+QGSCGSCW+FS TG IEG+ A+ TG+L   SEQEL+DCDTT   C+GG MD A++ + + GG++ E++YPY      C+  +  +  V + G+ D+   +   +        PIS+G+  +A+  Q Y  G+   +   CS     +DH VL+VGYG
Sbjct:  393 ELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFNRTLSH-VQVAGFVDLPKGNETAMQEWLLANGPISIGI--NANAMQFYRGGVSHPWKALCSKK--NLDHGVLVVGYG 563          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.020e-31
Identity = 75/186 (40.32%), Postives = 102/186 (54.84%), Query Frame = 2
Query:   26 SNLHNTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSEN 577
            SN+   V++  AP S+DWR   I+ P KDQG CGSCW+F TT  +EG      G L S SEQ+LVDCD +  GC+GG+   + +++  N G+  ESDYPY  V GTC   K+   V ++ G + V       L   + +  P++VGM  S   FQLY  G    D       ++H V  VGYGS +
Sbjct:   84 SNVKAAVKA--APESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCDASDNGCEGGHPSNSLKFIQENNGLGLESDYPYKAVAGTC---KKVKNVATVTGSRRVTDGSETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMMNHCVTAVGYGSNS 262          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.332e-31
Identity = 76/175 (43.43%), Postives = 104/175 (59.43%), Query Frame = 2
Query:   62 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVI--NNGGIDTESDYPYTGVDG---TCNITKEETKV-VSIDGYKDVEPSDSALLC-AAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGY 565
            P ++DWR++G VTPVKDQG+CGSCW+FS  G IEG   L   +L+SLSEQ+LV CD  + GCDGG M  AF+W++   NG + TE  YPY   +G    C+ + EE  V   IDG+  +  S+ A+    A   PI++ +   AS F  Y SG+           ++H VL+VGY
Sbjct:  127 PDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIAL--DASSFMSYKSGVLTACIGKQ---LNHGVLLVGY 296          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.273e-31
Identity = 74/174 (42.53%), Postives = 102/174 (58.62%), Query Frame = 2
Query:   62 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVI--NNGGIDTESDYPYTGVDG---TCNITKEETKVVSIDGYKDVEPSDSALLC-AAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGY 565
            P ++DWR++G VTPVKDQG+CGSCW+FS  G IEG   L   +L+SLSEQ+LV CD  + GCDGG M  AF+W++   NG + TE  YPY   +G    C+ + E      IDG+  +  S+ A+    A   PI++ +   AS F  Y SG+           ++H VL+VGY
Sbjct:  127 PDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIAL--DASSFMSYKSGVLTACIGKQ---LNHGVLLVGY 295          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.968e-31
Identity = 74/175 (42.29%), Postives = 100/175 (57.14%), Query Frame = 2
Query:   62 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSE 574
            P  +DWR  G VTPVK+QG C S W+FS TG++EG     TG L+ LSEQ L+DC     ++ C GG+M  AF++V +NGG+ TE  YPY G    C     E    ++  +  +   + AL+ A  +  PISV +  S   FQ Y SGI Y   C     +++HAVL+VGYG E
Sbjct:  115 PKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDCMGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGPGRKCRY-HAENSAANVRDFVQIPGREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKR--VHLNHAVLVVGYGFE 286          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.968e-31
Identity = 79/181 (43.65%), Postives = 103/181 (56.91%), Query Frame = 2
Query:   44 VQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVI--NNGGIDTESDYPYT---GVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA--AVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGY 565
            V+   AP+++DWR RG VT VKDQG CGSCW+FS  G +E    L    L +LSEQ LV CD T  GC GG M+ AFEW++  NNG + TE  YPY    G+   C  T   T   +I G+ ++ P D A + A  AV  P++V +   AS +  YT G+     S     +DH VL+VGY
Sbjct:  118 VEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCT-TSGHTVGATITGHVEL-PQDEAQIAAWLAVNGPVAVAV--DASSWMTYTGGVMTSCVSEQ---LDHGVLLVGY 291          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.877e-31
Identity = 76/193 (39.38%), Postives = 103/193 (53.37%), Query Frame = 2
Query:   20 AKSNLHNTVQ--SCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINN--GGIDTESDYPYTGVDG---TCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSEN 577
            A+  L  TV   +  AP+++DWR++G VTPVK QG CGSCW+FST G IEG   +    L+SLSEQ LV CDT   GC+GG MD AF W++N+  G + TE+ YPY   +G    C +   E      D     +  D+     A   P+++ +   A  F  Y  GI     S     +DH VL+VGY   +
Sbjct:  111 AQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAV--DAESFMDYNGGILTSCTSKQ---LDHGVLLVGYNDNS 298          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.613e-31
Identity = 74/176 (42.05%), Postives = 96/176 (54.55%), Query Frame = 2
Query:   50 SCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSEN 577
            S + P S DWR R  VT VK Q  CGSCW+FS    IE +  +     + LSEQ+LVDCD  + GC+GG M +AFE +I  GGI  E+ YPYTGVDG C   K  T+ V + G    +      L   + +   V +     D   Y SG+    CS D + ++H VL+VGYG EN
Sbjct:  130 SGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCDKVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVC---KNTTRYVQLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVDLTNYKSGVAK-HCSVD-HGLNHGVLLVGYGQEN 300          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.128e-30
Identity = 66/179 (36.87%), Postives = 107/179 (59.78%), Query Frame = 2
Query:   44 VQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSA-LLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSEN 577
            V     P S+DWR  G VT VK+QG CGSCW+F++   +E I  +  G+L+SLSEQ+++DC   SYGC GG+++ A+ ++I+N G+ + + YPY    GTC  T        I  Y  V+ ++   ++ A   QPI+  +  ++ +FQ Y  G++ G C      ++HA++I+GYG ++
Sbjct:  118 VDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC-AVSYGCKGGWINKAYSFIISNKGVASAAIYPYKAAKGTCK-TNGVPNSAYITRYTYVQRNNERNMMYAVSNQPIAAAL-DASGNFQHYKRGVFTGPCGT---RLNHAIVIIGYGQDS 290          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.513e-30
Identity = 74/187 (39.57%), Postives = 109/187 (58.29%), Query Frame = 2
Query:   41 TVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTG---DLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQP-ISVGMVGSASDFQLYTSGIYNG-DCSNDPYYIDHAVLIVGYGSENG 580
            T  + +AP S+DWR +G VTP++DQ  CGSC++F +  A+EG   +  G   + + LSE+ LV C  D  + GC+GG     ++++I N G+  ESDYPYTG D TC    +      I GY  V  ++ A L AA+ Q  + V +  S++ FQLY SG Y+   C N+ + ++H V  VGYG  +G
Sbjct:   81 TYLNIQAPESVDWRAQGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRDNGNNGCNGGLGSNVYDYIIQN-GVAKESDYPYTGTDSTCKTNVK--AFAKITGYNKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYSDTKCKNNFFALNHEVCAVGYGVVDG 264          
The following BLAST results are available for this feature:
BLAST of CN188414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CPR1_DROME4.579e-3240.91Putative cysteine proteinase CG12163 OS=Drosophila... [more]
ACP1_ENTHI1.020e-3140.32Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CYSP2_LEIPI1.332e-3143.43Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
LMCPB_LEIME2.273e-3142.53Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
TEST2_MOUSE2.968e-3142.29Testin-2 OS=Mus musculus PE=2 SV=1[more]
CYSP_TRYCR2.968e-3143.65Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CYSP_TRYBB3.877e-3139.38Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATV_GVXN6.613e-3142.05Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
ANAN_ANACO1.128e-3036.87Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CPP3_ENTHI2.513e-3039.57Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006A01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188414 ID=CN188414; Name=CN188414; organism=Citrus sinensis; type=EST; length=581bp
ATTTAAAGCGATTGGTAATGCAAAGAGTAACTTGCACAACACGGTACAAT
CATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGGAATCGTTACT
CCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGTTCTCTACGAC
TGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGACCTCATTAGCC
TTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTATGGATGTGAT
GGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACAACGGTGGAAT
CGACACAGAATCTGATTATCCTTACACCGGTGTCGATGGTACCTGCAATA
TCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTATAAAGATGTA
GAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAACAACCGATTAG
CGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATATACAAGTGGAA
TTTACAATGGTGACTGTTCCAACGACCCATATTACATTGATCATGCGGTT
TTGATAGTTGGTTATGGCTCTGAAAATGGTG
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