CN188414

Overview
NameCN188414
Unique NameCN188414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.087e-41
Identity = 84/170 (49.41%), Postives = 108/170 (63.53%), Query Frame = 2
Query:   62 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDS-ALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYG 568
            P S+DWR++G VTPVK+Q  CGSCW+FST   IEGIN ++TG LISLSEQEL+DC+  S+GCDGGY   + ++V++N G+ TE +YPY    G C    ++   V I GYK V  +D  +L+ A   QP+SV        FQ Y  GIY G C  +    DHAV  VGYG
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYRSHGCDGGYQTPSLQYVVDN-GVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTN---TDHAVTAVGYG 167          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.420e-41
Identity = 84/174 (48.28%), Postives = 105/174 (60.34%), Query Frame = 2
Query:   62 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSA-LLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENG 580
            P ++DWRK+G VTPV+ QGSCGSCW+FS    +EGIN + TG L+ LSEQELVDC+  S+GC GGY  YA E+V  N GI   S YPY    GTC   +    +V   G   V+P++   LL A  +QP+SV +      FQLY  GI+ G C      +DHAV  VGYG   G
Sbjct:  134 PENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTK---VDHAVTAVGYGKSGG 303          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 3.164e-41
Identity = 89/188 (47.34%), Postives = 118/188 (62.77%), Query Frame = 2
Query:   23 KSNLHNTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSE 574
            K  L       + P ++DWR++G VTPVK+QG CGSCW+FS +G +EG   L TG LISLSEQ LVDC  D  + GC+GG MD+AF+++  NGG+D+E  YPY   DG+C   + E  V +  G+ D+   + AL+ A A   PISV M  S    Q Y+SGI Y  +CS+    +DH VL+VGYG E
Sbjct:  102 KGRLFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY-RAEYAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKD--LDHGVLVVGYGYE 286          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.049e-41
Identity = 87/178 (48.88%), Postives = 115/178 (64.61%), Query Frame = 2
Query:   56 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD--TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIY-NGDCSNDPYYIDHAVLIVGYGSEN 577
            EAP S+DWR++G VTPVK+QG CGSCW+FS TGA+EG     TG L+SLSEQ LVDC     + GC+GG MDYAF++V +NGG+D+E  YPY   + +C    E + V +  G+ D+   + AL+ A A   PISV +      F  Y  GIY   DCS++   +DH VL+VGYG E+
Sbjct:  113 EAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYNPEYS-VANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSED--MDHGVLVVGYGFES 287          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 9.206e-41
Identity = 84/176 (47.73%), Postives = 115/176 (65.34%), Query Frame = 2
Query:   62 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENG 580
            P S+D+RK+G VTPVK+QG CGSCW+FS+ GA+EG     TG L++LS Q LVDC T +YGC GGYM  AF++V  NGGID+E  YPY G D +C +     K     GY+++   +   L  AV +  PISV +  S + FQ Y+ G+ Y+ +C  D   ++HAVL+VGYG++ G
Sbjct:  116 PDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKG 288          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.202e-40
Identity = 86/176 (48.86%), Postives = 114/176 (64.77%), Query Frame = 2
Query:   65 SSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENG 580
            + +DWR +G VTPVKDQG CGSCW+FSTTG++EG + L TG LISL+EQ+LVDC       GC+GG+M+ AF+++  N GIDTE+ YPY   DG+C          +  G+ ++       L  AV+   PISV +  + S FQ Y+SG+Y  + S  P Y+DHAVL VGYGSE G
Sbjct:  109 TEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSCRFDSNSV-AATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYY-EPSCSPSYLDHAVLAVGYGSEGG 282          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.202e-40
Identity = 89/188 (47.34%), Postives = 117/188 (62.23%), Query Frame = 2
Query:   23 KSNLHNTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSE 574
            K  L       + P S+DWR++G VTPVK+QG CGSCW+FS +G +EG   L TG LISLSEQ LVDC     + GC+GG MD+AF+++  NGG+D+E  YPY   DG+C   + E  V +  G+ D+   + AL+ A A   PISV M  S    Q Y+SGI Y  +CS+    +DH VL+VGYG E
Sbjct:  102 KGRLFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSK--NLDHGVLLVGYGYE 286          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.570e-40
Identity = 84/175 (48.00%), Postives = 112/175 (64.00%), Query Frame = 2
Query:   62 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL--CAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSE 574
            P S+DWR+ G VT VKDQG CGSCW+FS+TGA+EG +    G L+SLSEQ LVDC T   + GC+GG MD AF ++ +NGGIDTE  YPY G+D +C+  K  T   +  G+ D+   D   +    A   P+SV +  S   FQLY+ G+YN +   D   +DH VL+VGYG++
Sbjct:  123 PKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNK-ATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYN-EPECDEQNLDHGVLVVGYGTD 295          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 2.679e-40
Identity = 84/186 (45.16%), Postives = 111/186 (59.68%), Query Frame = 2
Query:   35 HNTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT--TSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYK-DVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSENG 580
            H    +   P + DWR+ GIV+PVKDQG CGSCW+FSTTG++E      TG  +SLSEQ+LVDC T   ++GC GG    AFE++  NGG+DTE  YPYTGV+G C+   E   V  +D     +   D       + +P+SV      + F++Y SG+Y  D C   P  ++HAVL VGYG ENG
Sbjct:  137 HRMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVRPVSVAF-QVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENG 321          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.679e-40
Identity = 91/178 (51.12%), Postives = 114/178 (64.04%), Query Frame = 2
Query:   56 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIY-NGDCSNDPYYIDHAVLIVGYGSE 574
            E P S+DWR++G VTPVK+QG CGSCW+FS TGA+EG     TG L+SLSEQ LVDC     + GC+GG MD AF +V +NGG+D+E  YPY G D  TCN  K E    +  G+ D+   + AL+ A A   PISV +      FQ Y SGIY + DCS+    +DH VL+VGYG E
Sbjct:  113 EIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNY-KPECSAANDTGFVDLPQREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKD--LDHGVLVVGYGFE 287          
The following BLAST results are available for this feature:
BLAST of CN188414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
MEX1_JACME1.087e-4149.41Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
PAPA3_CARPA1.420e-4148.28Caricain OS=Carica papaya PE=1 SV=2[more]
CATL1_RAT3.164e-4147.34Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CATL1_CERAE7.049e-4148.88Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATK_MOUSE9.206e-4147.73Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CYSP2_HOMAM1.202e-4048.86Digestive cysteine proteinase 2 OS=Homarus america... [more]
CATL1_MOUSE1.202e-4047.34Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATL_SARPE1.570e-4048.00Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
ORYC_ORYSJ2.679e-4045.16Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATL1_CANFA2.679e-4051.12Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006A01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188414 ID=CN188414; Name=CN188414; organism=Citrus sinensis; type=EST; length=581bp
ATTTAAAGCGATTGGTAATGCAAAGAGTAACTTGCACAACACGGTACAAT
CATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGGAATCGTTACT
CCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGTTCTCTACGAC
TGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGACCTCATTAGCC
TTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTATGGATGTGAT
GGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACAACGGTGGAAT
CGACACAGAATCTGATTATCCTTACACCGGTGTCGATGGTACCTGCAATA
TCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTATAAAGATGTA
GAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAACAACCGATTAG
CGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATATACAAGTGGAA
TTTACAATGGTGACTGTTCCAACGACCCATATTACATTGATCATGCGGTT
TTGATAGTTGGTTATGGCTCTGAAAATGGTG
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