CN188414

Overview
NameCN188414
Unique NameCN188414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.376e-36
Identity = 83/177 (46.89%), Postives = 109/177 (61.58%), Query Frame = 2
Query:   62 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIY-NGDCSNDPYYIDHAVLIVGYGSENG 580
            P + DWRK GIV+PVK QG CGSCW+FSTTGA+E   A   G  ISLSEQ+LVDC     ++GC+GG    AFE++  NGG+DTE  YPYTG +G C  ++    V  I        ++  L  A A+ +P+SV        F+ Y SG+Y + +C + P  ++HAVL VGYG ENG
Sbjct:  140 PETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNGICKFSQANIGVKVISSVNITLGAEYELKYAVALVRPVSVAF-EVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVENG 315          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 1.797e-36
Identity = 83/176 (47.16%), Postives = 108/176 (61.36%), Query Frame = 2
Query:   56 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD--TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSE 574
            E P+S+DWR++G +TPVKDQG CGSCW+FS TGA+EG     TG LISL+EQ LVDC     + GC+GG+MD  F +V  NGG+D+E+ YPY G   TC    + +   +  G+ D+   +  L  A A   PISV    S   FQ Y  GIY  +   DP  +DHA+L+VGY  E
Sbjct:   56 EIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEGKVKTCRYNPKYS-AANDTGFVDIPSQEKDLAKAVATVGPISVAAGASHVSFQFYKKGIY-FEPRCDPEGLDHAMLLVGYSYE 229          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.347e-36
Identity = 79/179 (44.13%), Postives = 113/179 (63.13%), Query Frame = 2
Query:   62 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSY---GCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV--QQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENG 580
            P S+DWR++G VT VK QG+CGSCW+FS  GA+E    L TG L+SLS Q LVDC T  Y   GC+GG+M  AF+++I+N GID+E+ YPY  +DG C     + +  +   Y ++       L  AV  + P+SVG+  S S F LY +G+ Y+  C+ +   ++H VL+VGYG+ +G
Sbjct:  116 PDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQY-DVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQN---VNHGVLVVGYGNLDG 290          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.227e-36
Identity = 81/184 (44.02%), Postives = 113/184 (61.41%), Query Frame = 2
Query:   62 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD---------TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ-PISVGMVGSASDFQLYTSGIYNGDCSNDPYY-----IDHAVLIVGYG 568
            P   DWR++G VTPVKDQGSCGSCW+FSTTGA+EG + L TG L+SLSEQ+LVDCD         +   GC+GG M+ AFE+++ +GG+  E DY YTG DG+C   K +  V S+  +  V   +  +    V+  P++V +  +A+  Q Y SG+      + PY      +DH VL+VG+G
Sbjct:  133 PEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDKSKV-VASVSNFSVVTLDEDQIAANLVKNGPLAVAI--NAAWMQTYMSGV------SCPYVCAKSRLDHGVLLVGFG 307          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.917e-36
Identity = 77/174 (44.25%), Postives = 107/174 (61.49%), Query Frame = 2
Query:   65 SSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSE 574
            + +DWR +G VTPVKDQG CGSCW+FS   A+EG + L TGDL+SLSEQ LVDC ++  + GC+GG+   A++++I N GIDTES YPY  +D  C          ++  Y +    D + L  AVQ   P+SV +    S F  Y  G+Y  + + D +Y +HAV  VGYG++
Sbjct:  108 ADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNCRYDAGNIG-ATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYY-EPNCDSWYANHAVTAVGYGTD 279          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.917e-36
Identity = 69/172 (40.12%), Postives = 103/172 (59.88%), Query Frame = 2
Query:   62 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSEN 577
            P S+DWR  G V  VK+Q  CGSCWSF+    +EGI  + TG L+SLSEQE++DC   SYGC GG+++ A++++I+N G+ TE +YPY    GTCN          I GY  V  +D   +  AV       ++ ++ +FQ Y  G+++G C      ++HA+ I+GYG ++
Sbjct:  124 PQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDC-AVSYGCKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTCNANSFPNSAY-ITGYSYVRRNDERSMMYAVSNQPIAALIDASENFQYYNGGVFSGPCGTS---LNHAITIIGYGQDS 290          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.165e-35
Identity = 77/179 (43.02%), Postives = 111/179 (62.01%), Query Frame = 2
Query:   62 PSSLDWRKRG-IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT--TSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV--QQPISVGMVGSASDFQLYTSGIYNG-DCSNDPYYIDHAVLIVGYGSENG 580
            PSS+DWRK+G +V+PVK+QG+C SCW+FSTTGA+E   A+ +G ++SL+EQ+LVDC     ++GC GG    AFE+++ N GI  E  YPY G D +C    ++  V  +    ++  +D A +  AV    P+S        DF +Y SG+Y+   C   P  ++HAVL VGYG +NG
Sbjct:  115 PSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSCRFNPQKA-VAFVKNVVNITLNDEAAMVEAVALYNPVSFAF-EVTEDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNG 291          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.986e-35
Identity = 77/179 (43.02%), Postives = 111/179 (62.01%), Query Frame = 2
Query:   62 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSY---GCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE--PSDSALLCAAVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENG 580
            P S+DWR++G VT VK QGSCG+CW+FS  GA+E    L TG L+SLS Q LVDC T  Y   GC+GG+M  AF+++I+N GID+E+ YPY  ++G C    ++ +  +   Y ++     D+     A + P+SV +  S   F LY SG+ Y   C+ +   ++H VL+VGYG+ NG
Sbjct:  116 PDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRYDSKK-RAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQN---VNHGVLVVGYGNLNG 290          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.986e-35
Identity = 83/196 (42.35%), Postives = 112/196 (57.14%), Query Frame = 2
Query:    8 AIGNAKSNLHNTVQSCEA--PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYK-DVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSEN 577
            A  N  + L  + +  EA  P + DWR+ GIV+PVK+QG CGSCW+FSTTGA+E       G  ISLSEQ+LVDC  T  ++GC GG    AFE++  NGG+DTE  YPYTG DG C  + +   V   D     +   D       + +P+SV       +F+ Y  G++  + C N P  ++HAVL VGYG E+
Sbjct:  122 AAQNCSATLKGSHKITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGGCKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAF-EVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVED 316          
BLAST of CN188414 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 1.986e-35
Identity = 81/185 (43.78%), Postives = 113/185 (61.08%), Query Frame = 2
Query:   62 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD---------TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ-PISVGMVGSASDFQLYTSGIYNGDCSNDPYY----IDHAVLIVGYGS 571
            P   DWR RG VTPVK+QGSCGSCWSFSTTGA+EG + L TG L+SLSEQ+LVDCD         +   GC+GG M+ AFE+ +  GG+  E DYPYTG D G+C + + +  V S+  +  V  ++  +    ++  P++V +  +A+  Q Y  G+      + PY     ++H VL+VGYGS
Sbjct:  133 PEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKI-VASVSNFSVVSINEDQIAANLIKNGPLAVAI--NAAYMQTYIGGV------SCPYICSRRLNHGVLLVGYGS 308          
The following BLAST results are available for this feature:
BLAST of CN188414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CYSP3_SOLLC1.376e-3646.89Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATL6_HUMAN1.797e-3647.16Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATS_BOVIN2.347e-3644.13Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CYSP_PEA5.227e-3644.02Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CRUST_PANBO8.917e-3644.25Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
BROM1_ANACO8.917e-3640.12Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CATH_MOUSE1.165e-3543.02Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATS_CANFA1.986e-3543.02Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
ALEUL_ARATH1.986e-3542.35Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
A494_ARATH1.986e-3543.78Probable cysteine proteinase A494 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006A01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188414 ID=CN188414; Name=CN188414; organism=Citrus sinensis; type=EST; length=581bp
ATTTAAAGCGATTGGTAATGCAAAGAGTAACTTGCACAACACGGTACAAT
CATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGGAATCGTTACT
CCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGTTCTCTACGAC
TGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGACCTCATTAGCC
TTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTATGGATGTGAT
GGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACAACGGTGGAAT
CGACACAGAATCTGATTATCCTTACACCGGTGTCGATGGTACCTGCAATA
TCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTATAAAGATGTA
GAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAACAACCGATTAG
CGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATATACAAGTGGAA
TTTACAATGGTGACTGTTCCAACGACCCATATTACATTGATCATGCGGTT
TTGATAGTTGGTTATGGCTCTGAAAATGGTG
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