CN188410

Overview
NameCN188410
Unique NameCN188410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1693..2412. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.867e-38
Identity = 83/146 (56.85%), Postives = 102/146 (69.86%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHH+ LEGTLLKPNMVTPG     K + E IA  TV AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  219 DHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.867e-38
Identity = 83/146 (56.85%), Postives = 102/146 (69.86%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHH+ LEGTLLKPNMVTPG     K + E IA  TV AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  219 DHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.744e-38
Identity = 83/146 (56.85%), Postives = 105/146 (71.92%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAPKVT-PEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHHV LEGTLLKPNMVT G+ AP  T PE +A  T+ AL+RT+P AVP + FLSGGQSEE+A+ +LNA+N+L   KPW+L+FS+GRALQ S LKAW GK+EN++ AQ   + R K N +A+ G YK     G  A ESL V ++ Y
Sbjct:  219 DHHVYLEGTLLKPNMVTVGTAAPASTRPEQVAMATLTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYK-PTGTGAAAGESLFVANHAY 363          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 158.303 bits (399), Expect = 3.744e-38
Identity = 84/146 (57.53%), Postives = 95/146 (65.07%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHHV LEGTLLKPNMVT G   PK  TP+ +A  TV  L RT+PAAVP + FLSGGQSEEEA+ NLNAMNQ    KPW L+FS+GRALQ S L AW GK EN + AQ AF  R + NS A  G Y    +    A +SL    Y Y
Sbjct:  219 DHHVYLEGTLLKPNMVTAGHSCPKKYTPQDVAVATVTTLLRTVPAAVPGICFLSGGQSEEEASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 364          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 6.386e-38
Identity = 82/146 (56.16%), Postives = 101/146 (69.18%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHHV LEGTLLKPNMVTPG   P K +PE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL+V ++ Y
Sbjct:  219 DHHVYLEGTLLKPNMVTPGHACPIKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGD-GGAAAQSLYVANHAY 363          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.341e-38
Identity = 83/146 (56.85%), Postives = 94/146 (64.38%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHHV LEGTLLKPNMVT G    K  TPE +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  ANS+A  G Y      G  + +SL    Y Y
Sbjct:  219 DHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 8.341e-38
Identity = 82/146 (56.16%), Postives = 101/146 (69.18%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHH+ LEGTLLKPNMVTPG     K + E I   TV AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  219 DHHIYLEGTLLKPNMVTPGHACTQKFSHEEIVMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 156.762 bits (395), Expect = 1.089e-37
Identity = 81/146 (55.48%), Postives = 101/146 (69.18%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHHV LEGTLLKPNMVTPG   P K +PE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL++ ++ Y
Sbjct:  219 DHHVYLEGTLLKPNMVTPGHACPIKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGD-GGAAAQSLYIANHAY 363          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 4.139e-37
Identity = 81/146 (55.48%), Postives = 93/146 (63.70%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHHV LEGTLLKPNMVT G    K  TPE +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N+    +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  A +SL    Y Y
Sbjct:  219 DHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAMANCQAAQGQYVHTGSSGAAATQSLFTASYTY 364          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 5.406e-37
Identity = 82/146 (56.16%), Postives = 93/146 (63.70%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHHV LEGTLLKPNMVT G    K  TPE +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  ANS+A  G Y         + +SL    Y Y
Sbjct:  219 DHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQYVHMGSSDSASTQSLFTASYTY 364          
The following BLAST results are available for this feature:
BLAST of CN188410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOA_PANTR2.867e-3856.85Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALDOA_HUMAN2.867e-3856.85Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALF1_LAMJA3.744e-3856.85Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOB_CHICK3.744e-3857.53Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALDOC_RAT6.386e-3856.16Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOB_BOVIN8.341e-3856.85Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALDOA_PONAB8.341e-3856.16Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOC_MOUSE1.089e-3755.48Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOB_MOUSE4.139e-3755.48Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALDOB_SHEEP5.406e-3756.16Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005P22_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188410 ID=CN188410; Name=CN188410; organism=Citrus sinensis; type=EST; length=717bp
AGGAAGCACAAGAAAACATTATCAATTATGTGACAAAATCACAGAAATTT
AGCGCCATTAGGGGAAAAGGAAAAAAAAAAACAAAAACAAAAGCATAAAC
AGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAAGC
TTTTTATTGCTCCACCTAATATGAAAAAGCCCTAAAACTATGAATGAGAA
TGTGCCAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATAAA
GCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACAT
GGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAGTA
CCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTG
GGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCT
GCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCGTC
TTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTCCTCACTCTG
CCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTT
GCAGGGCCCGGACAGTGTGTTCAGCAATCACCTCCGGTGTAACTTTGGGA
GCTTCAGATCCAGGGGTCACCATGTTGGGCTTCAAAAGGGTACCCTCAAG
AAGGACATGGTGGTCAT
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