CN188410

Overview
NameCN188410
Unique NameCN188410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1693..2412. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALDOB_RABIT (Fructose-bisphosphate aldolase B OS=Oryctolagus cuniculus GN=ALDOB PE=1 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 7.061e-37
Identity = 81/146 (55.48%), Postives = 92/146 (63.01%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHHV LEGTLLKPNMVT G    K  TPE +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R   N +A  G Y      G  + +SL    Y Y
Sbjct:  219 DHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRAVVNCQAAKGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALDOB_HUMAN (Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.573e-36
Identity = 81/146 (55.48%), Postives = 92/146 (63.01%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHHV LEGTLLKPNMVT G    K  TPE +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  219 DHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 2.054e-36
Identity = 81/146 (55.48%), Postives = 92/146 (63.01%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHHV LEGTLLKPNMVT G    K  TPE +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  219 DHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAVANHQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.504e-36
Identity = 77/146 (52.74%), Postives = 100/146 (68.49%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHHV LEG+LLKPNMVT G  +  + +P+ +A  TV AL+RT+P+AVP + FLSGGQSEE+A+ NLNA+NQL  ++PW+LSFS+GRALQ S LKAWAG   N+  A+  F  R   N  A  G Y      G  A+ESL + ++ Y
Sbjct:  219 DHHVYLEGSLLKPNMVTAGQASKIRCSPQEVAMATVTALRRTVPSAVPGITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.577e-36
Identity = 80/145 (55.17%), Postives = 101/145 (69.66%), Query Frame = -3
Query:  281 HHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 712
            ++V+ EG LLKP+MVTPG+EA  + TPE +A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W GKEENV+ AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  258 NNVMFEGILLKPSMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 5.977e-36
Identity = 78/146 (53.42%), Postives = 104/146 (71.23%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            +++V+ EG LLKP+MVTPG+E   + TPE ++++T++ L R +P AVP ++FLSGGQSE EAT+NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV+ AQ A L+R KANS A LG Y  D +  E A E + VK+Y Y
Sbjct:  246 ENNVMFEGILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.807e-36
Identity = 82/148 (55.41%), Postives = 101/148 (68.24%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAPKV-TPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGD--AQLGEGAAESLHVKDYKY 715
            DHHV LEGTLLKPNMVT G    K  TP+  A  TVRALQRT+P AVP + FLSGGQSE +AT+NLN +N++   KPW+L+FSFGRALQ S L  W GK+ENV  AQ   L   KAN  A +G ++G+    LG+   +SL V ++ Y
Sbjct:  219 DHHVYLEGTLLKPNMVTAGQACKKAYTPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGD---KSLFVANHAY 363          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.739e-35
Identity = 78/146 (53.42%), Postives = 93/146 (63.70%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            DHHV LEGTLLKPNM+T G    K  TPE +A  TV AL RT+PAAVP++ FLSGG SEE+AT NLNA+ +    +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  219 DHHVYLEGTLLKPNMLTAGHACTKKYTPEQVAMATVTALHRTVPAAVPSICFLSGGMSEEDATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 84/146 (57.53%), Postives = 101/146 (69.18%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            ++ VLLEG LLKPNMVT G E   K T + +   TVR L+RT+P A+P VVFLSGGQSEEEA+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  GE A  SL+ K Y Y
Sbjct:  226 ENGVLLEGALLKPNMVTAGYECTAKTTTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPH-PWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 84/146 (57.53%), Postives = 101/146 (69.18%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            ++ VLLEG LLKPNMVT G E   K T + +   TVR L+RT+P A+P VVFLSGGQSEEEA+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  GE A  SL+ K Y Y
Sbjct:  226 ENGVLLEGALLKPNMVTAGYECTAKTTTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPH-PWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369          
The following BLAST results are available for this feature:
BLAST of CN188410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOB_RABIT7.061e-3755.48Fructose-bisphosphate aldolase B OS=Oryctolagus cu... [more]
ALDOB_HUMAN1.573e-3655.48Fructose-bisphosphate aldolase B OS=Homo sapiens G... [more]
ALDOB_PONAB2.054e-3655.48Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALF2_LAMJA3.504e-3652.74Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALFC1_ARATH4.577e-3655.17Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC_ORYSJ5.977e-3653.42Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALF_SCHMA7.807e-3655.41Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALDOB_RAT1.739e-3553.42Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALF_PLAFA3.874e-3557.53Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF_PLAF73.874e-3557.53Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005P22_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188410 ID=CN188410; Name=CN188410; organism=Citrus sinensis; type=EST; length=717bp
AGGAAGCACAAGAAAACATTATCAATTATGTGACAAAATCACAGAAATTT
AGCGCCATTAGGGGAAAAGGAAAAAAAAAAACAAAAACAAAAGCATAAAC
AGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAAGC
TTTTTATTGCTCCACCTAATATGAAAAAGCCCTAAAACTATGAATGAGAA
TGTGCCAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATAAA
GCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACAT
GGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAGTA
CCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTG
GGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCT
GCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCGTC
TTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTCCTCACTCTG
CCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTT
GCAGGGCCCGGACAGTGTGTTCAGCAATCACCTCCGGTGTAACTTTGGGA
GCTTCAGATCCAGGGGTCACCATGTTGGGCTTCAAAAGGGTACCCTCAAG
AAGGACATGGTGGTCAT
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