CN188410

Overview
NameCN188410
Unique NameCN188410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.512e-28
Identity = 65/124 (52.42%), Postives = 81/124 (65.32%), Query Frame = -3
Query:  344 HHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTY 712
            H V+ EG LLKPNMV PG+E+  K   E +AE+TV+ L R +P A+P V FLSGG SE  A+  LNAMN     +PW L+FS+ RALQ S +K W GKE  V+  + AF+ R K NS A LG Y
Sbjct:  230 HGVVWEGCLLKPNMVVPGAESGLKGHAEQVAEYTVKTLARVIPPALPGVTFLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKY 353          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.097e-25
Identity = 61/128 (47.66%), Postives = 87/128 (67.97%), Query Frame = -3
Query:  338 DHHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 715
            + +V+LEGT+LK +MV PG++  +  + + +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQL    PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  208 EQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQL-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.356e-24
Identity = 60/128 (46.88%), Postives = 86/128 (67.19%), Query Frame = -3
Query:  338 DHHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 715
            + +V+LEGT+LK +MV PG++  +  + + +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQ     PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  208 EQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQF-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 66/146 (45.21%), Postives = 89/146 (60.96%), Query Frame = -3
Query:  281 DHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 715
            D+ V+L+G LLKP MVTPG++   K  P  +AE+T++ L    P  VP ++FLSGGQSE E+T NLNAMNQ  +  PW +SFS+ RAL  + LK W      VQ  + A   R KANS+A  G Y    + G+ AA+ ++ K   Y
Sbjct:  232 DNKVMLQGILLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQ--SPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTE-GKEAAQGMYEKGKGY 372          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 8.953e-24
Identity = 63/133 (47.37%), Postives = 85/133 (63.91%), Query Frame = -3
Query:  320 DHHVLLEGTLLKPNMVTPGS-EAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 715
            +++VLLEG+ LKP+MV PG+  A K  PE +A++ ++ L R     VP ++ LSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ + LK W   +ENV+    A     K+NS A LG Y G+ +  E
Sbjct:  254 ENNVLLEGSSLKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQ--SPNPWHVSFSYARALQNTCLKTWVEGQENVKAQDFAC---AKSNSLAQLGKYTGEGESEE 381          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.169e-23
Identity = 61/128 (47.66%), Postives = 83/128 (64.84%), Query Frame = -3
Query:  338 DHHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 715
            + +V+LEGT+LK +MV  G    +  + E +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK WA     N  KAQ     R K N  A LG +KG
Sbjct:  208 EQNVVLEGTILKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.443e-23
Identity = 60/128 (46.88%), Postives = 83/128 (64.84%), Query Frame = -3
Query:  338 DHHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 715
            + +V+LEGT+LK +MV  G    +  + E +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK W+     N  KAQ     R K N  A LG +KG
Sbjct:  208 EQNVVLEGTILKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CN188410 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.523e-18
Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = -3
Query:  386 VLLEGTLLKPNMVTPGSEA-PKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFL 706
            V + G L+K + VT G  +  K TP+ +A  T+RAL  T+P  +P +VFLSGG   E+A   LNA+N  +  + WSLSFSF RAL    L+ W G + N+++AQ   L
Sbjct:  213 VYIPGVLIKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILL 320          
The following BLAST results are available for this feature:
BLAST of CN188410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_TRYBB3.512e-2852.42Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF1_XYLFA8.097e-2547.66Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFT2.356e-2446.88Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_CHLRE6.855e-2445.21Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALFC_SPIOL8.953e-2447.37Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALF1_XANAC1.169e-2347.66Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP4.443e-2346.88Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_ENCCU2.523e-1843.52Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005P22_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188410 ID=CN188410; Name=CN188410; organism=Citrus sinensis; type=EST; length=717bp
AGGAAGCACAAGAAAACATTATCAATTATGTGACAAAATCACAGAAATTT
AGCGCCATTAGGGGAAAAGGAAAAAAAAAAACAAAAACAAAAGCATAAAC
AGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAAGC
TTTTTATTGCTCCACCTAATATGAAAAAGCCCTAAAACTATGAATGAGAA
TGTGCCAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATAAA
GCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACAT
GGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAGTA
CCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTG
GGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCT
GCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCGTC
TTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTCCTCACTCTG
CCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTT
GCAGGGCCCGGACAGTGTGTTCAGCAATCACCTCCGGTGTAACTTTGGGA
GCTTCAGATCCAGGGGTCACCATGTTGGGCTTCAAAAGGGTACCCTCAAG
AAGGACATGGTGGTCAT
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