CK939859

Overview
NameCK939859
Unique NameCK939859
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939859 vs. ExPASy Swiss-Prot
Match: KCS18_ARATH (3-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana GN=FAE1 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.526e-37
Identity = 84/200 (42.00%), Postives = 115/200 (57.50%), Query Frame = 3
Query:  171 VKLGYHYLITHGMFLFLSPLVVIVAAQLSTFSFQDLYDLWEHLQYNLISVIICSXXXXXXXXXXXXXRPRPVYLVDFSCYKPEESRKCTKRIFMD----------QSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVIN 740
            VKL Y Y++T+   L L PL   +A + S  +  DL++   +LQ+NLI+V +               RP PVYLVD+SCY P    K +    MD           SR        +L F +KI ERSGLGD TY PE ++++PP  +   +R+E E V+ GA++ LF  T V P++IGIL+VN S+FNPTPSLSAMV+N
Sbjct:    6 VKLLYRYVLTNFFNLCLFPLTAFLAGKASRLTINDLHNFLSYLQHNLITVTLLFAFTVFGLVLYIVTRPNPVYLVDYSCYLPPPHLKVSVSKVMDIFYQIRKADTSSRNVACDDPSSLDFLRKIQERSGLGDETYSPEGLIHVPPRKTFAASREETEKVIIGALENLFENTKVNPREIGILVVNSSMFNPTPSLSAMVVN 205          
BLAST of CK939859 vs. ExPASy Swiss-Prot
Match: KCS16_ARATH (3-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana GN=KCS16 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.428e-35
Identity = 81/199 (40.70%), Postives = 117/199 (58.79%), Query Frame = 3
Query:  162 LKYVKLGYHYLITHGMFLFLSPLVVIVAAQLSTFSFQDLYDLWEHLQYNLISVIICSXXXXXXXXXXXXXRPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMT---GTFTEEN---LQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVIN 740
            +K VK+ ++YL+ H   L   PL+V +A + S  S QDL + + +LQ N  S+ +               RP+PVYLVDFSCY P    K + +  M   R+    G + +E+   + F +KILERSGLG  TY+PE +  +P   ++  +R E E V+ GA+D LF  T + P DIGIL+VN S FNPTPSLS++++N
Sbjct:    5 MKKVKIFFNYLMAHRFKLCFLPLMVAIAVEASRLSTQDLQNFYLYLQNNHTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSHLKASTQRIMQHVRLVREAGAWKQESDYLMDFCEKILERSGLGQETYVPEGLQTLPLQQNLAVSRIETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVN 203          
BLAST of CK939859 vs. ExPASy Swiss-Prot
Match: KCS14_ARATH (Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis thaliana GN=KCS14 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.428e-35
Identity = 67/123 (54.47%), Postives = 91/123 (73.98%), Query Frame = 3
Query:  372 RPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVIN 740
            R +PVYLVDFSC++P +S K +   F + ++    +TEE +QF  +IL RSGLGD TY P  +L  PP PSM EAR E+E V+FGA++ LF KT ++P+++GI IVNCSLFNP PSLS+M++N
Sbjct:   56 RSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVN 178          
BLAST of CK939859 vs. ExPASy Swiss-Prot
Match: KCS13_ARATH (3-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana GN=HIC PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.182e-35
Identity = 66/123 (53.66%), Postives = 91/123 (73.98%), Query Frame = 3
Query:  372 RPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVIN 740
            R +PVYLVDFSC++P +S K +   F + ++    +T+E +QF  +IL RSGLGD TY P  +L  PP PSM EAR E+E V+FGA++ LF KT ++P+++GI IVNCSLFNP PSLS+M++N
Sbjct:   56 RSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTDETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVN 178          
BLAST of CK939859 vs. ExPASy Swiss-Prot
Match: KCS15_ARATH (3-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana GN=KCS15 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.755e-31
Identity = 78/214 (36.45%), Postives = 115/214 (53.74%), Query Frame = 3
Query:  138 PDFKKSVKLKYVKLGYHYLITHG------------MFLFLSPLVVIVAAQLSTFSFQDLYDLWEHLQYNLISVIICSXXXXXXXXXXXXXRPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINH 743
            PDF     L+YVKLGY YL++              +F+F+S  + I+A  LSTF    +Y                               P  V+L+DFSCY+P +  K TK  F++ +  +G F E  ++ Q+K+L++SG+G+ +Y+P  V       ++++ R+EA  V+FGAIDEL A T +  K I IL++NC + N TPSLSAMVINH
Sbjct:   22 PDFL-GYNLRYVKLGYIYLLSLSRTFCFFLPPLLLLFIFVSRFLPILAFPLSTFFILLIYHY---------------------------LTPSSVFLLDFSCYRPPDHLKITKSDFIELAMKSGNFNETAIELQRKVLDQSGIGEESYMPRVVFKPGHRVNLRDGREEAAMVIFGAIDELLAATKINVKHIKILVLNCGVLNTTPSLSAMVINH 207          
BLAST of CK939859 vs. ExPASy Swiss-Prot
Match: KCS8_ARATH (3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana GN=KCS8 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.257e-30
Identity = 77/185 (41.62%), Postives = 104/185 (56.22%), Query Frame = 3
Query:  213 LFLSPLVVIVAAQLSTFSFQDLYDL-WEHLQYNLISVIICSXXXXXXXXXXXXXRPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMT--------GTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVIN 740
            LF+S L+  +A + S  + +DL      H Q NL ++ +               RP+PVYLVDFSCY P    K + +  M  +R             ++  + FQ+KILERSGLG  TY+PE +   P    M  +RKE E V+FGA+D LF  T VKP DIGIL+VN S FNPTPSL++M++N
Sbjct:   12 LFIS-LMAGLAMKGSKINVEDLQKFSLHHTQNNLQTISLLLFLVVFVWILYMLTRPKPVYLVDFSCYLPPSHLKVSIQTLMGHARRAREAGMCWKNKESDHLVDFQEKILERSGLGQETYIPEGLQCFPLQQGMGASRKETEEVIFGALDNLFRNTGVKPDDIGILVVNSSTFNPTPSLASMIVN 195          
BLAST of CK939859 vs. ExPASy Swiss-Prot
Match: KCS7_ARATH (3-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana GN=KCS7 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.526e-26
Identity = 52/119 (43.70%), Postives = 80/119 (67.23%), Query Frame = 3
Query:  384 VYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVIN 740
            +YL+DFSCY+P +  +     F++   ++G F +E+L  Q+KILERSG+ D   +P  V  IPPN S+  AR+E   ++F  + +LF+K  + PK I IL+ NCSLF P+PS+++M+IN
Sbjct:   47 IYLIDFSCYQPPDFLRAPVSNFIEHLTISGVFDQESLDLQQKILERSGISDDASVPATVHEIPPNASISAAREETHEILFAIVQDLFSKHEIDPKSIDILVSNCSLFCPSPSITSMIIN 165          
BLAST of CK939859 vs. ExPASy Swiss-Prot
Match: KCS20_ARATH (Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana GN=KCS20 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.412e-20
Identity = 45/119 (37.82%), Postives = 73/119 (61.34%), Query Frame = 3
Query:  384 VYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVIN 740
            VYL+DF+CY+  +S +      ++   +     +E++ FQ +ILERS L + T +P +++ IP   S+   + E    +F ++++L  K  + P+ I ILI NCSL +P+PSLSAMVIN
Sbjct:   51 VYLLDFTCYRAPDSNRVPMSTLIETIYLDDKLDQESIDFQARILERSWLSNQTSIPRSLMEIPLKKSLSSVKIETMTTIFTSVEDLLRKNKLSPRSIDILITNCSLHSPSPSLSAMVIN 169          
BLAST of CK939859 vs. ExPASy Swiss-Prot
Match: KCS21_ARATH (3-ketoacyl-CoA synthase 21 OS=Arabidopsis thaliana GN=KCS21 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.239e-15
Identity = 46/124 (37.10%), Postives = 68/124 (54.84%), Query Frame = 3
Query:  378 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLN-IPPNPSMKEARKEAEAVMFGAIDELFAKT--SVKPKDIGILIVNCSLFNPTPSLSAMVIN 740
            R  Y++ + CYK  E RK          +       E  +F  + +  SG+G+ TY P  VL     +P++ +A  E + +MF  +D+LF KT  S+ P DI IL+VN SLF P+PSL++ VIN
Sbjct:   31 RNCYMLHYECYKGMEERKLDTETCAKVVQRNKNLGLEEYRFLLRTMASSGIGEETYGPRNVLEGREDSPTLLDAHSEMDEIMFDTLDKLFHKTKGSISPSDIDILVVNVSLFAPSPSLTSRVIN 154          
BLAST of CK939859 vs. ExPASy Swiss-Prot
Match: KCS3_ARATH (3-ketoacyl-CoA synthase 3 OS=Arabidopsis thaliana GN=KCS3 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12
Identity = 37/125 (29.60%), Postives = 61/125 (48.80%), Query Frame = 3
Query:  372 RPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLN-IPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINH 743
            R +  Y++D+ C+KP + R    +   D             +F  K +  SG+G+ TY P          P++++   E E      I+++  +  + P +I IL+VN S+ N TPSLSA +INH
Sbjct:   70 RDQNCYILDYQCHKPSDDRMVNTQFSGDIILRNKHLRLNEYKFLLKAIVSSGIGEQTYAPRLFFEGREQRPTLQDGLSEMEEFYIDTIEKVLKRNKISPSEIDILVVNVSMLNSTPSLSARIINH 194          
The following BLAST results are available for this feature:
BLAST of CK939859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS18_ARATH1.526e-3742.003-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana... [more]
KCS16_ARATH1.428e-3540.703-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana... [more]
KCS14_ARATH1.428e-3554.47Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis... [more]
KCS13_ARATH3.182e-3553.663-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana... [more]
KCS15_ARATH4.755e-3136.453-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana... [more]
KCS8_ARATH5.257e-3041.623-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana ... [more]
KCS7_ARATH3.526e-2643.703-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana ... [more]
KCS20_ARATH8.412e-2037.82Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis... [more]
KCS21_ARATH6.239e-1537.103-ketoacyl-CoA synthase 21 OS=Arabidopsis thaliana... [more]
KCS3_ARATH2.219e-1229.603-ketoacyl-CoA synthase 3 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004744_F03 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IVF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939859 ID=CK939859; Name=CK939859; organism=Citrus sinensis; type=EST; length=743bp
TTTTTTTTTTTTTTTCTCGTTGGTTTCTCTGTCGAGATTCAAGCGATCCG
CCGGTGGGTTTTGACAATCAAGGGAAAATGACTGAGCCAAAACCAAATAC
GCCCTTGATCCCACCAACATCACCATCACGAAATCTCCCTGATTTCAAGA
AGTCAGTTAAGCTAAAATATGTGAAACTTGGATATCATTACCTAATCACT
CATGGAATGTTCCTCTTCCTTTCACCTCTTGTAGTCATAGTTGCCGCGCA
GCTTTCAACGTTTTCTTTTCAGGACCTTTATGATCTTTGGGAGCATCTCC
AGTACAATCTTATTTCTGTTATCATATGCTCAACTTTGCTTGTTTTCCTC
TTGACACTTTACTTTCTCACTCGCCCCCGGCCTGTTTACCTCGTAGACTT
TTCCTGCTACAAGCCTGAAGAATCTCGGAAATGTACTAAAAGGATTTTTA
TGGATCAGTCCCGGATGACTGGTACATTTACAGAGGAAAATCTTCAGTTT
CAGAAGAAGATCCTAGAGCGATCTGGACTTGGTGATTCAACTTACCTTCC
AGAGGCTGTGCTCAACATTCCTCCAAACCCATCAATGAAAGAAGCTAGAA
AAGAAGCTGAGGCTGTGATGTTTGGTGCCATTGATGAGCTTTTTGCAAAA
ACCTCTGTGAAACCCAAGGACATTGGTATCTTGATTGTGAATTGTAGCTT
GTTCAATCCAACGCCATCTCTGTCTGCCATGGTCATCAACCAT
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