CN188409
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188409 vs. ExPASy Swiss-Prot
Match: SAR1_CANAL (Small COPII coat GTPase SAR1 OS=Candida albicans GN=SAR1 PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.674e-22 Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 2 Query: 599 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKF 796 M++FDWF IL+SLGLW K AK+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG ++F Sbjct: 1 MWIFDWFQDILSSLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRF 66
BLAST of CN188409 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.733e-21 Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 2 Query: 599 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKF 796 M++ +WF +LASLGLW K AK+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEELSIG ++F Sbjct: 1 MWVLNWFQDVLASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELSIGNVRF 66
BLAST of CN188409 vs. ExPASy Swiss-Prot
Match: SAR1_YARLI (Small COPII coat GTPase SAR1 OS=Yarrowia lipolytica GN=SAR1 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = 2 Query: 599 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKF 796 M++ +WFY +L+SLGLW K AK+LFLGLDNAGKTTLLHMLK++R+ PT HPTSEELSIG KF Sbjct: 1 MWIVNWFYDVLSSLGLWNKNAKLLFLGLDNAGKTTLLHMLKNDRMAVSNPTVHPTSEELSIGNCKF 66
BLAST of CN188409 vs. ExPASy Swiss-Prot
Match: SAR1_CRYNE (Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans GN=SAR1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.861e-21 Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 2 Query: 599 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKF 796 MF+ +WF+ +LASLGL K AK+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG +KF Sbjct: 1 MFIINWFWDVLASLGLMNKSAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGNVKF 66
BLAST of CN188409 vs. ExPASy Swiss-Prot
Match: SAR1_YEAST (Small COPII coat GTPase SAR1 OS=Saccharomyces cerevisiae GN=SAR1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.586e-21 Identity = 47/64 (73.44%), Postives = 53/64 (82.81%), Query Frame = 2 Query: 605 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKF 796 +F WF +LASLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG IKF Sbjct: 6 IFGWFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKF 69
BLAST of CN188409 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.586e-21 Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 2 Query: 599 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKF 796 MF+ +WF+ ILA LGL K AKILFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG++KF Sbjct: 1 MFIINWFWDILAQLGLAHKNAKILFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGQVKF 66
BLAST of CN188409 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.586e-21 Identity = 48/64 (75.00%), Postives = 53/64 (82.81%), Query Frame = 2 Query: 605 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKF 796 LF WF IL+SLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG IKF Sbjct: 6 LFGWFRDILSSLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKF 69
BLAST of CN188409 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.586e-21 Identity = 48/64 (75.00%), Postives = 53/64 (82.81%), Query Frame = 2 Query: 605 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKF 796 LF WF IL+SLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG IKF Sbjct: 6 LFGWFRDILSSLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGSIKF 69
BLAST of CN188409 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.602e-21 Identity = 47/64 (73.44%), Postives = 53/64 (82.81%), Query Frame = 2 Query: 605 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKF 796 +F WF +LASLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG IKF Sbjct: 5 VFGWFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKF 68
BLAST of CN188409 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.503e-20 Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 2 Query: 599 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFK 799 MFLFDWF+ +L+ LGL+ K AKILFLGLDNAGKTTLL +LKD RL + PT HPTSEEL++G I+FK Sbjct: 1 MFLFDWFWNVLSFLGLYNKNAKILFLGLDNAGKTTLLGVLKDGRLSSYLPTFHPTSEELAMGNIRFK 67 The following BLAST results are available for this feature:
BLAST of CN188409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188409 ID=CN188409; Name=CN188409; organism=Citrus sinensis; type=EST; length=800bpback to top |