CN188387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188387 vs. ExPASy Swiss-Prot
Match: RS23_ICTPU (40S ribosomal protein S23 OS=Ictalurus punctatus GN=rps23 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.537e-24 Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -2 Query: 167 VPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 343 VPNDGCLN+IEENDEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+K KKE+PRS Sbjct: 85 VPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
BLAST of CN188387 vs. ExPASy Swiss-Prot
Match: RS23_HUMAN (40S ribosomal protein S23 OS=Homo sapiens GN=RPS23 PE=1 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 1.537e-24 Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -2 Query: 167 VPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 343 VPNDGCLN+IEENDEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+K KKE+PRS Sbjct: 85 VPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
BLAST of CN188387 vs. ExPASy Swiss-Prot
Match: RS23_CHILA (40S ribosomal protein S23 OS=Chinchilla lanigera GN=RPS23 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.537e-24 Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -2 Query: 167 VPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 343 VPNDGCLN+IEENDEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+K KKE+PRS Sbjct: 85 VPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
BLAST of CN188387 vs. ExPASy Swiss-Prot
Match: RS23_BOVIN (40S ribosomal protein S23 OS=Bos taurus GN=RPS23 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.537e-24 Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -2 Query: 167 VPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 343 VPNDGCLN+IEENDEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+K KKE+PRS Sbjct: 85 VPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
BLAST of CN188387 vs. ExPASy Swiss-Prot
Match: RS23_LUMRU (40S ribosomal protein S23 OS=Lumbricus rubellus GN=RPS23 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.621e-24 Identity = 51/59 (86.44%), Postives = 57/59 (96.61%), Query Frame = -2 Query: 167 VPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 343 VP DGCLN+IEENDEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+K+KKE+PRS Sbjct: 85 VPRDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVASVSLLALYKQKKERPRS 143
BLAST of CN188387 vs. ExPASy Swiss-Prot
Match: RS23_YEAST (40S ribosomal protein S23 OS=Saccharomyces cerevisiae GN=RPS23A PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.423e-24 Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -2 Query: 167 VPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 343 VPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGVSLLAL+KEKKEKPRS Sbjct: 87 VPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of CN188387 vs. ExPASy Swiss-Prot
Match: RS23_SACCA (40S ribosomal protein S23 OS=Saccharomyces castellii GN=RPS23A PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.423e-24 Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -2 Query: 167 VPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 343 VPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGVSLLAL+KEKKEKPRS Sbjct: 87 VPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of CN188387 vs. ExPASy Swiss-Prot
Match: RS23_SACBA (40S ribosomal protein S23 OS=Saccharomyces bayanus GN=RPS23A PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.423e-24 Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -2 Query: 167 VPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 343 VPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGVSLLAL+KEKKEKPRS Sbjct: 87 VPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of CN188387 vs. ExPASy Swiss-Prot
Match: RS23_CANGA (40S ribosomal protein S23 OS=Candida glabrata GN=RPS23 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.423e-24 Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -2 Query: 167 VPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 343 VPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGVSLLAL+KEKKEKPRS Sbjct: 87 VPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of CN188387 vs. ExPASy Swiss-Prot
Match: RS23_BRUMA (40S ribosomal protein S23 OS=Brugia malayi GN=rps-23 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.471e-24 Identity = 50/59 (84.75%), Postives = 56/59 (94.92%), Query Frame = -2 Query: 167 VPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 343 VPNDGCLN+IEENDEVL+AGFGRKGHAVGDIPGVRFK+VKV+ SL+ALFK KKE+PRS Sbjct: 85 VPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143 The following BLAST results are available for this feature:
BLAST of CN188387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188387 ID=CN188387; Name=CN188387; organism=Citrus sinensis; type=EST; length=344bpback to top |