CK939816

Overview
NameCK939816
Unique NameCK939816
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length756
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939816 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.407e-16
Identity = 40/100 (40.00%), Postives = 63/100 (63.00%), Query Frame = 3
Query:  420 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGR 716
            S+ EL+E+T+NF  + +IG G +G VY G +  G   AIK+ +  S+Q   EF  ++ M+S+L+H + V L+GYC +    +L YE+ SNG   D L+G+
Sbjct:  514 SLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGK 613          
BLAST of CK939816 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.407e-16
Identity = 41/109 (37.61%), Postives = 67/109 (61.47%), Query Frame = 3
Query:  372 KGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSL 695
            K  + + ++  ++  +  D ++  T +F  +  +GEG +G VY G+L  G   A+K+L   S Q D EF+ +VS+V++L+H N V+LLG+C+ G  R+L YEF  N SL
Sbjct:  317 KDLEELMIKDAQLLQLDFDTIRLATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSL 425          
BLAST of CK939816 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.407e-16
Identity = 42/102 (41.18%), Postives = 69/102 (67.65%), Query Frame = 3
Query:  420 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKK-LDAS--KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGR 716
            S +EL++ T  F  ++ +G+GS+  V+ GIL+ G   A+K+ + AS  K+  +EF  ++ ++SRL H + + LLGYC DG+ R+L YEF ++GSL+  LHG+
Sbjct:  494 SYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGK 595          
BLAST of CK939816 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16
Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 3
Query:  429 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKK-LDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLS 755
            EL+  T+NF  NA+ G G +G+VY G +  G   AIK+   +S+Q   EF  ++ M+S+L+H + V L+G+C +    +L YE+ SNG L D L+G K      P P LS
Sbjct:  517 ELQTATQNFDENAVCGVGGFGKVYIGEIDGGTQVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSK-ENDPNPIPTLS 625          
BLAST of CK939816 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.914e-16
Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 3
Query:  402 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHG 713
            ++  + ++ ++K  T NF     IGEG +G VY G+L  G   A+K+L + SKQ + EF+ ++ M+S L+H N V+L G C++G   +L YE+  N SL   L G
Sbjct:  650 LQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFG 754          
BLAST of CK939816 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.914e-16
Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 3
Query:  402 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHG 713
            ++  + ++ ++K  T NF     IGEG +G VY G+L  G   A+K+L + SKQ + EF+ ++ M+S L+H N V+L G C++G   +L YE+  N SL   L G
Sbjct:  652 LQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFG 756          
BLAST of CK939816 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.914e-16
Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 3
Query:  417 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK 719
            +  + LK  T+NF     +G G +G VY G+   G   A+K+L   S Q D EF  ++ ++++L+H N V+LLG+C++G  R+L YEF  N SL + +   K
Sbjct:  349 VDFETLKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLK 450          
BLAST of CK939816 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.691e-15
Identity = 46/140 (32.86%), Postives = 76/140 (54.29%), Query Frame = 3
Query:  324 SSAGTDGAYHASEAAPKGAQAVKVQPIEVPAIS---------VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHG 713
            S +G +G + ++     G        + +P IS         + +L+  T  F    ++GEG YG VY G L +G   A+KKL +   Q ++EF  +V  +  ++H+N V+LLGYC++G  R+L YE+ ++G+L   LHG
Sbjct:  131 SHSGEEGGFGSAGRQYGGGPVTASPLVGLPEISHLGWGHWFTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHG 270          
BLAST of CK939816 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.691e-15
Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = 3
Query:  405 EVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH 710
            EV  +++ EL + T+NF    +IG G +G VY   L +G   A+KKL       ++EF A+V ++SR KHEN V L GYCV  ++R+L Y F  NGSL   LH
Sbjct:  787 EVKDLTIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLH 889          
BLAST of CK939816 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.209e-15
Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 3
Query:  402 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGR 716
            ++    ++ ++K  T+NF     IGEG +G VY G L  G   A+K+L A S+Q + EF+ ++ M+S L+H N V+L G CV+G   +L YE+  N  L   L G+
Sbjct:  661 LQTGTFTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGK 766          
The following BLAST results are available for this feature:
BLAST of CK939816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
Y2214_ARATH3.407e-1640.00Probable receptor-like protein kinase At2g21480 OS... [more]
CRK41_ARATH3.407e-1637.61Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRI4_MAIZE3.407e-1641.18Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y5613_ARATH7.591e-1640.00Probable receptor-like protein kinase At5g61350 OS... [more]
Y5344_ARATH9.914e-1638.10Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH9.914e-1638.10Probable LRR receptor-like serine/threonine-protei... [more]
CRK28_ARATH9.914e-1637.25Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
Y2296_ARATH1.691e-1532.86Probable receptor-like protein kinase At2g42960 OS... [more]
PSYR1_ARATH1.691e-1543.69Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
Y1765_ARATH2.209e-1537.74Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004745_C09 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939816 ID=CK939816; Name=CK939816; organism=Citrus sinensis; type=EST; length=756bp
GGGGACAACTGAAAATTATTTTTAAACAGTAAACCAAGGCCATTTTAATA
ATTCCATTCCGGGACCGAGACAGCAACCCGAAGTCAAAAAGCGCTTTATA
CGTTTTTCTTCATCCTGCGCACCTATCGTCGTCTTATCCTGCGCACCTCA
CGCCGGCTCCAGAGTGATTCATTCAAAATATCCAGCTCGTTGCTTTTCTC
TATATCTCAGCTAGCTTTCATAGAGGGGCATTATTGTGGCAGTGAATCAT
GAGCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACA
ATGGCAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTAT
CATGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCC
CATTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAGGAAATTACTGAGA
ACTTTGGGACTAATGCTTTGATTGGAGAAGGTTCATATGGAAGAGTATAT
TATGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAAGTTGGATGC
CAGCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAA
GGTTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGG
ACTTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGA
TATTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTT
TGTCAT
back to top