CK939813

Overview
NameCK939813
Unique NameCK939813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.164e-41
Identity = 96/179 (53.63%), Postives = 115/179 (64.25%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFL 665
            D   LQDVCVA  D    V VNG  CK      A DF    + KPG T N+ G   T ANVEQ+PGLNTLG+S  RIDYAP G  PPH HPRASE+  V+EG L VGF+T+    N L++K + KG+VFVFP+GL+HFQ N G+  AA  SA NSQ PG  +I  T+FGA+P +  D L
Sbjct:   34 DEDMLQDVCVA--DLHSKVKVNGFPCKTN--FTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITT---ANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVL 205          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.049e-41
Identity = 86/175 (49.14%), Postives = 117/175 (66.86%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSI 650
            +D   LQD CV   D K    +NG  CK      A DFF+SGLG P NT+   GV  + ANV   PGLNTLG+S   +++AP G  PPH HPRA+E  +V+EG+++VGF+T+   NNTL +KVLN G++FV P+GL+HFQ+N+GK  A   ++ NSQ PG   + +T+FG+NP+I
Sbjct:   28 SDSDPLQDFCVG--DLKASPSINGFPCKSS--VSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTT---NNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTI 195          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 7.049e-41
Identity = 87/175 (49.71%), Postives = 114/175 (65.14%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSI 650
            +D   LQD CV   D K    +NG  CK      A DFFYSGLG P +T+N  GV    ANV   PGLNTLGIS   ++ AP G  PPH HPRA+E+  V+EG+++VGF+++   NNTL +KVLN G+ FV P+GL+HFQ+N+G+  A   +A NSQ PG V + +T+FG+ P I
Sbjct:   28 SDSDPLQDFCVG--DLKASASINGFPCKSA--VSASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLST---NNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLFGSKPEI 195          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 7.794e-40
Identity = 93/177 (52.54%), Postives = 110/177 (62.15%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPD 659
            D   LQD+CVA  D    + VNG  CK      AEDFF + L K G T N  G   T ANV++IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N LIAK + KG+ FVFP+GL+HFQ N G   A   +  NSQ PG V I  T+F A P + PD
Sbjct:   22 DADALQDLCVA--DYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITT---TNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPV-PD 192          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.470e-38
Identity = 90/186 (48.39%), Postives = 120/186 (64.52%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVF-VNGKFCKDPKLARAEDFFYSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYG-QRPPHFHPRASEIFLVLEGTLYVGFV--TSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFG-ANPSINPDFL 665
            DP  LQD+CVA      G   VNG  CK      AEDFF+ GLGKP +  + N +G   T A VE+IPGLNTLG+S  R+DYAP+G   PPH HPRA+EI  V +G L VGFV  T+   ++ LI +V+ KG VFVFP+GL+H++ ++G+  A A SA +SQ PG    A+ +FG ++P++  D L
Sbjct:   29 DPDMLQDICVADYKSLQGPLRVNGFPCKPEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYERSVGEKPAVAISAFDSQLPGTQAAADALFGSSSPAVPTDVL 214          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.507e-38
Identity = 92/176 (52.27%), Postives = 115/176 (65.34%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKP------GNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGA 638
            DP  LQD CVA  DP   V VNG  CKDP    A+DFF+SG+G+P      G TA+R     T  +V+ IPGLNTLG SA R+D AP G  PPH+HPRASE  +VL G +Y GFVTS   ++ ++AKVL +GDVF  PQGL+HF  N G   AA Y++L+SQ PG V +A+ +  A
Sbjct:   30 DPNPLQDFCVA--DPTSKVRVNGLPCKDPAAVTADDFFFSGVGEPAAGGGRGATASRR-YGFTARSVD-IPGLNTLGASAARVDVAPGGVFPPHYHPRASETAVVLAGAVYFGFVTS-YPDSRVVAKVLRRGDVFAVPQGLVHFLHNNGSEPAALYASLSSQNPGLVLVADALLAA 200          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.586e-38
Identity = 84/175 (48.00%), Postives = 110/175 (62.86%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSI 650
            TDP  LQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPH HPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I
Sbjct:   24 TDPDPLQDFCVADLDGK-AVSVNGHTCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPI 197          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.772e-37
Identity = 83/175 (47.43%), Postives = 108/175 (61.71%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSI 650
            ++P  LQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G   TD NV + PG NTLG+S  R+D+AP G  PPH HPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+     NSQ P  V +  T+FG+NP I
Sbjct:   24 SNPHPLQDFCVADLDGK-AVSVNGHMCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPI 197          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.620e-37
Identity = 83/175 (47.43%), Postives = 110/175 (62.86%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSI 650
            +DP  LQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPH HPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I
Sbjct:   24 SDPDPLQDFCVADLDGK-AVSVNGHPCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPI 197          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.053e-36
Identity = 83/175 (47.43%), Postives = 109/175 (62.29%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSI 650
            +DP  LQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPH HPRA+EI +V++G L VG + S    N L ++V+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG++P I
Sbjct:    1 SDPDPLQDFCVADLDGK-AVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPI 174          
The following BLAST results are available for this feature:
BLAST of CK939813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
NEC1_NICLS3.164e-4153.63Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GLT2_ARATH7.049e-4149.14Germin-like protein subfamily T member 2 OS=Arabid... [more]
GLT1_ARATH7.049e-4149.71Germin-like protein subfamily T member 1 OS=Arabid... [more]
RHRE_PEA7.794e-4052.54Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GL14_ORYSJ1.470e-3848.39Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GL51_ORYSJ2.507e-3852.27Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GER2_WHEAT5.586e-3848.00Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
GER3_WHEAT2.772e-3747.43Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
OXO2_HORVU3.620e-3747.43Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
OXO1_HORVU1.053e-3647.43Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004745_C07 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939813 ID=CK939813; Name=CK939813; organism=Citrus sinensis; type=EST; length=665bp
GGGGAAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGAC
TTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGC
TTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCACCTTCAAGATG
TCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAG
TTCTGTAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTACTCAGG
GCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAG
ATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCA
TTCCGCATTGACTATGCACCATATGGCCAAAGGCCACCTCACTTTCACCC
CCGTGCCAGTGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTT
TTGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAAT
AAGGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAA
CATTGGAAAAACAAATGCAGCTGCTTATTCTGCTCTAAACAGCCAATTCC
CGGGTGAAGTTACCATAGCCAACACAGTCTTTGGAGCCAATCCTTCAATC
AATCCCGATTTTCTT
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