EY666040

Overview
NameEY666040
Unique NameEY666040
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666040 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11
Identity = 70/224 (31.25%), Postives = 99/224 (44.20%), Query Frame = 2
Query:  203 KNFSVIGLRSCNLSEF---------PHF----LYNQKLLDSLNLSSNRIAGQVPGWF-----------LNNVSVDG-----------FDYLNLSHNLLTGF-----GQVLPWAYMITLDLSFNKLRGPLPIPVPAFTSSYL--VSNNQLTGEIPPSICSLNRLYALDLSHNNLSGMLPGCLGNSSVQLLVLKLQGNKFHGFIPETFSKGTNLRMIDFNGNLLQG 748
            +N S+IG+   N+S F         P F    L N   L   N S   + G +P WF           L++ SV+G              LNLS N LT       GQ+L    +  LDLS N   G LP    +  +     VS+N LTG IPP + +L++L  L+ S N+ S  +P  LG+  V L+   L  N   G +P+   K + L+++    NLL G
Sbjct:   70 ENGSIIGI---NISGFRRTRIGKLNPQFSVDPLRNLTRLSYFNASGLALPGTIPEWFGVSLLALEVLDLSSCSVNGVVPFTLGNLTSLRTLNLSQNSLTSLVPSSLGQLLN---LSQLDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIPSELGD-LVNLVDFDLSINSLSGSVPQELRKLSKLQLMAIGDNLLSG 286          
BLAST of EY666040 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.107e-11
Identity = 49/152 (32.24%), Postives = 69/152 (45.39%), Query Frame = 2
Query:  302 NRIAGQVPGWFLNNVSVDGFDYLNLSHNLLTGFGQVLPWAYMITLDLSFNKLRGPLPIPVPAFTSSYLV---SNNQLTGEIPPSICSLNRLYALDLSHNNLSGMLPGCLGNSSVQLLVLKLQGNKFHGFIPETFSKGTNLRMIDFNGNLLQG 748
            NR+ GQ PG   +N       Y+N+S                      FNKL G +P  +    +S  +   S NQ+ G IP S+  L  L AL+LS N L G +PG LG     L  L +  N   G IP++F +  +L ++D + N L G
Sbjct:  568 NRLYGQFPGNLFDNCDELKAVYVNVS----------------------FNKLSGRIPQGLNNMCTSLKILDASVNQIFGPIPTSLGDLASLVALNLSWNQLQGQIPGSLGKKMAALTYLSIANNNLTGQIPQSFGQLHSLDVLDLSSNHLSG 697          
BLAST of EY666040 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.711e-11
Identity = 57/174 (32.76%), Postives = 84/174 (48.28%), Query Frame = 2
Query:  251 PHFLYNQKLLDSLNLSSNRIAGQVPGWF--LNNVSVDGFDYLNLSHNLLTG---FGQVLPWAYMITLDLSFNKLRGPLPIPVPAFTS--SYLVSNNQLTGEIPPSICSLNRLYALDLSHNNLSGMLPGCLGNSSVQLLVLKLQGNKFHGFIPETFSKGTNLRMIDFNGNLLQGE 751
            P  + N   L  L L  N++ G +P     L N++      L + +N L G   FG       ++TLDLS+N+  G +P  +   +S  + ++ +  L+G IP S+  L  L  L+LS N LSG +P  LGN S  L +LKL  N+  G IP    K   L  ++   N   GE
Sbjct:  212 PESIGNSSSLQILYLHRNKLVGSLPESLNLLGNLTT-----LFVGNNSLQGPVRFGSP-NCKNLLTLDLSYNEFEGGVPPALGNCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCS-SLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGE 378          
The following BLAST results are available for this feature:
BLAST of EY666040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
Y2165_ARATH3.910e-1131.25Probable LRR receptor-like serine/threonine-protei... [more]
RPK2_ARATH5.107e-1132.24LRR receptor-like serine/threonine-protein kinase ... [more]
PEPR1_ARATH8.711e-1132.76Leucine-rich repeat receptor-like protein kinase P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-013-B09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666040 ID=EY666040; Name=EY666040; organism=Citrus sinensis; type=EST; length=836bp
GATCTGCAGTACGGTCGGATTCCGGGTCGACCCACGCGTCCGCGAGCTCA
GAATCTTGTGGACGTTTGAACTCGCCGGCAACAATTTGAGTGGAATTTTG
GATATAAACAAGTTCCTATTTAACATGAAAAGTTTAGAAGTGTTAGTTCT
CTCGTCAAACAAATTGTCACTGCTCACCGATACCACTGTGAATACCTATC
CCAAGAACTTCAGTGTTATAGGATTACGTTCATGCAACCTTAGTGAGTTC
CCACATTTTCTGTACAACCAAAAACTCCTGGATTCCTTGAATCTTTCGTC
CAACAGGATAGCTGGTCAGGTGCCTGGATGGTTTTTAAACAACGTAAGCG
TAGACGGTTTTGATTATTTAAACCTTTCTCACAATCTATTGACAGGCTTC
GGGCAGGTTCTTCCATGGGCTTATATGATTACTTTAGACCTCAGTTTTAA
CAAGCTGCGAGGACCACTCCCAATTCCAGTACCAGCGTTCACCTCATCCT
ATCTAGTTTCAAACAATCAGCTGACGGGGGAAATTCCACCATCAATTTGC
AGTTTGAATCGTCTTTATGCACTTGATCTGTCTCACAATAACTTAAGTGG
CATGCTTCCAGGATGTTTGGGAAATTCCAGTGTTCAGCTTTTGGTATTAA
AACTGCAAGGTAACAAGTTCCACGGATTCATTCCTGAAACCTTCAGCAAA
GGAACAAATCTGAGGATGATTGATTTCAACGGCAACTTACTGCAAGGGGA
GAGTGCCCAAATCGCTAGCCAAATGCGTAAAGCTCAAATTTCTTAATTCT
GGGGAATAACAAATCACGGACCTCCTTTCCCTTCTT
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