CN188378

Overview
NameCN188378
Unique NameCN188378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188378 vs. ExPASy Swiss-Prot
Match: TCTP_ASPOR (Translationally-controlled tumor protein homolog OS=Aspergillus oryzae GN=AO090005000996 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.542e-14
Identity = 50/163 (30.67%), Postives = 81/163 (49.69%), Query Frame = -3
Query:  217 DELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQ-----EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 687
            DE++SD+F  KE +N ILWEV+ + +  G  ++ + GANPS               +V+DI   FRL + P  +K ++   +K ++K +  KL E++      + FK+N + A K +L+   D    VGES   D   +   Y+E    P   +    L+E K
Sbjct:   11 DEIISDAFNLKEVDN-ILWEVDCRNITIGDENIQLEGANPSAEGEDDDAGGAGNAEQVLDIKHNFRLNDYPKLEKDEYKKAIKGYMKKVLAKLEEKKAPEETIKEFKENAQTALKRILANYKDYDVLVGESFGADAMHILINYREDGVTPYATFWKHGLEEYK 172          
BLAST of CN188378 vs. ExPASy Swiss-Prot
Match: TCTP_DROPS (Translationally-controlled tumor protein homolog OS=Drosophila pseudoobscura pseudoobscura GN=Tctp PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.626e-14
Identity = 53/165 (32.12%), Postives = 88/165 (53.33%), Query Frame = -3
Query:  214 DELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYIADALKEVKC 687
            DE+ +D++  K  ++ +++EV GK + +   ++ + GAN S                 VD+V   RL E  AF DKK +  Y+K ++K +  KL+E   ++ ++FK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L+E KC
Sbjct:   11 DEMFADTYKIKLVDD-VVYEVYGKLISREGSEIKLEGANASAEEADEGTDTNVESG--VDVVLNHRLVECFAFGDKKSYTLYLKDYMKKVLAKLAEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREIDGQSIPVLMFFKHGLEEEKC 172          
BLAST of CN188378 vs. ExPASy Swiss-Prot
Match: TCTP_THEAN (Translationally-controlled tumor protein homolog OS=Theileria annulata GN=TCTP PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.890e-14
Identity = 52/163 (31.90%), Postives = 81/163 (49.69%), Query Frame = -3
Query:  223 DELLSDSF----PYKETE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKE 687
            DE+ SD++    P+   + + + +EV+   V +G  D  IG N                  VVD+VD F LQ  P   KK + +Y+K++I+ L   L E   ER E FK ++    K +L+   D +F+VGES+  +  LV+ YYK     P  +++ D L E
Sbjct:   11 DEVCSDAYDHLDPFDNPDLSSVAFEVKTSKVAKGEEDYGIGYNDEEGGDQMNVDPNVEV--VVDVVDKFALQSLP-LTKKDYSSYIKKYIQRLVATLQEKNPERVEPFKTSVSEFVKHVLANFDDFEFYVGESLDYEAGLVYGYYKGEEVSPRLVFLKDGLVE 170          
BLAST of CN188378 vs. ExPASy Swiss-Prot
Match: TCTP_PLAF7 (Translationally-controlled tumor protein homolog OS=Plasmodium falciparum (isolate 3D7) GN=TCTP PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.890e-14
Identity = 52/165 (31.52%), Postives = 85/165 (51.52%), Query Frame = -3
Query:  217 DELLSDSF----PYKETE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 687
            DE+ SDS+    P++  E   I +EV+    ++G  D  I  N                  V+DIVD+F+L    AF KK++  Y+K +++ +   L E   +R EIFK   +   K +L+   D +F++GES+  +  ++++YYK     P F+YI+D L E K
Sbjct:   11 DEVCSDSYVQQDPFEVPEFREIAFEVKSNKRIKGNEDYGIADNSEDAVEGMGADVEH----VIDIVDSFQLTST-AFSKKEYSAYIKNYMQKVAKYLEEKKPDRVEIFKTKAQPFIKHILTNFDDFEFYMGESLDMEAGIIYSYYKGEEITPRFVYISDGLFEEK 170          
BLAST of CN188378 vs. ExPASy Swiss-Prot
Match: TCTP_LONON (Translationally-controlled tumor protein homolog OS=Lonomia obliqua GN=Tctp PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 57/165 (34.55%), Postives = 84/165 (50.91%), Query Frame = -3
Query:  217 DELLSDSFPYKETENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYIADALKEVK 687
            DE+ SD++  K  +  +++EV GK V   QG + +D G NPS                 VDIV   RL E  AF DKK +  Y+K ++K L  KL E   ++ +IFK N+    K +L++  +LQFF GESM  DG +    Y+  +    P  ++    L+E K
Sbjct:   11 DEMFSDTYKVKLVDE-VIYEVTGKLVSRTQGDIQID-GFNPSAEEADEGTDSNVETG--VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKTNMNKVMKDILARFKELQFFTGESMDCDGMVAMMEYRKVDETEIPIMMFFKHGLEEEK 171          
BLAST of CN188378 vs. ExPASy Swiss-Prot
Match: TCTP_PLACH (Translationally-controlled tumor protein homolog OS=Plasmodium chabaudi GN=TCTP PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.296e-13
Identity = 52/165 (31.52%), Postives = 83/165 (50.30%), Query Frame = -3
Query:  217 DELLSDSF----PYKETE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 687
            DE+ SDS+    P+   E   I +EV+    ++G  D  I  N                  V+DIVD+F+L    +  KK++  Y+K F++ +   L E   +R EIFK   +   K +L+   D +F++GES+  +  L+++YYK     P F+YI+D L E K
Sbjct:   11 DEVCSDSYAQEDPFGNPEFREIAFEVKSNKRIKGNDDYGIADNSEDAVEGMGADVEH----VIDIVDSFQLTST-SLSKKEYSAYVKNFMQRILKHLEEKKPDRVEIFKTKAQPLIKHILTNFDDFEFYMGESLDMEAGLIYSYYKGEEITPRFVYISDGLFEEK 170          
BLAST of CN188378 vs. ExPASy Swiss-Prot
Match: TCTP_THEPA (Translationally-controlled tumor protein homolog OS=Theileria parva GN=TCTP PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13
Identity = 51/163 (31.29%), Postives = 81/163 (49.69%), Query Frame = -3
Query:  223 DELLSDSF----PYKETE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKE 687
            DE+ SD++    P+   + + + +EV+   V +G  D  IG N                  VVD+VD F LQ   +  KK + +Y++++I+ L   L E   ER E FK  +    K +L+   D +F+VGES+  +  LV+AYYK     P  +++ D L E
Sbjct:   11 DEVCSDAYDHHDPFDNADLSSVAFEVKTSKVPKGEEDYGIGYNDEEGADQMNVDPNVEM--VVDVVDKFGLQSL-SLTKKDYSSYIRKYIQRLVATLQEKNPERVEPFKTTVSDFVKHVLANFEDFEFYVGESLDYEAGLVYAYYKGEEVSPRLVFLKDGLVE 170          
BLAST of CN188378 vs. ExPASy Swiss-Prot
Match: TCTP_PLAYO (Translationally-controlled tumor protein homolog OS=Plasmodium yoelii yoelii GN=TCTP PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13
Identity = 51/165 (30.91%), Postives = 83/165 (50.30%), Query Frame = -3
Query:  217 DELLSDSF----PYKETE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 687
            DE+ SDS+    P+   E   I +EV+    ++G  D  I  N                  V+DIVD+F+L    +  KK++  Y+K F++ +   L E   +R +IFK   +   K +L+   D +F++GES+  +  L+++YYK     P F+YI+D L E K
Sbjct:   11 DEVCSDSYIQEDPFGNPEFREIAFEVKSNKRIKGNDDYGIADNSEDAVDGMGADVEH----VIDIVDSFQLTST-SLSKKEYSAYVKNFMQRILKHLEEKKPDRVDIFKTKAQPLIKHILTNFDDFEFYMGESLDMEAGLIYSYYKGEEITPRFVYISDGLFEEK 170          
BLAST of CN188378 vs. ExPASy Swiss-Prot
Match: TCTP_PLABA (Translationally-controlled tumor protein homolog OS=Plasmodium berghei (strain Anka) GN=TCTP PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13
Identity = 51/165 (30.91%), Postives = 82/165 (49.70%), Query Frame = -3
Query:  217 DELLSDSF----PYKETE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 687
            DE+ SDS+    P+   E   I +EV+    ++G  D  I  N                  V+DIVD+F+L    +  KK++  Y+K F++ +   L E   +R  IFK   +   K +L+   D +F++GES+  +  L+++YYK     P F+YI+D L E K
Sbjct:   11 DEVCSDSYIQEDPFGNAEFREIAFEVKSNKRIKGNDDYGIADNSEDAVDGMGADVEH----VIDIVDSFQLTST-SLSKKEYSAYVKNFMQRILKHLEEKKPDRVNIFKTKAQPLIKHILTNFDDFEFYMGESLDMEAGLIYSYYKGEEITPRFVYISDGLFEEK 170          
BLAST of CN188378 vs. ExPASy Swiss-Prot
Match: TCTP_PLAKN (Translationally-controlled tumor protein homolog OS=Plasmodium knowlesi GN=TCTP PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 48/165 (29.09%), Postives = 82/165 (49.70%), Query Frame = -3
Query:  217 DELLSDSFPYKETEN-----GILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 687
            DE+ SDS+  ++         I +EV+    ++G  D  I  N                 +V+DIVD+F+L    +  KK++  Y+K +++ +   L E   +R ++FK   +   K +L+   D +F++GES+  D  L ++YYK     P F+YI+D L E K
Sbjct:   11 DEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDYGIADNSEEAVDGMGADVE----QVIDIVDSFQLTST-SLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVYISDGLYEEK 170          
The following BLAST results are available for this feature:
BLAST of CN188378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
TCTP_ASPOR3.542e-1430.67Translationally-controlled tumor protein homolog O... [more]
TCTP_DROPS4.626e-1432.12Translationally-controlled tumor protein homolog O... [more]
TCTP_THEAN7.890e-1431.90Translationally-controlled tumor protein homolog O... [more]
TCTP_PLAF77.890e-1431.52Translationally-controlled tumor protein homolog O... [more]
TCTP_LONON1.346e-1334.55Translationally-controlled tumor protein homolog O... [more]
TCTP_PLACH2.296e-1331.52Translationally-controlled tumor protein homolog O... [more]
TCTP_THEPA5.114e-1331.29Translationally-controlled tumor protein homolog O... [more]
TCTP_PLAYO5.114e-1330.91Translationally-controlled tumor protein homolog O... [more]
TCTP_PLABA6.679e-1330.91Translationally-controlled tumor protein homolog O... [more]
TCTP_PLAKN1.943e-1229.09Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005P02_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005P02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188378 ID=CN188378; Name=CN188378; organism=Citrus sinensis; type=EST; length=689bp
AGTAAAAACTATTAAGTTATTTGGTAATTCAATCTCAAACCATAAAACCC
AATAATTAGGAGCAGAAAAACATATTGTTTATGTCAAAATAAAAACTAAA
AAACAGCAAGCACCTGTACAGAGTAAACCAGTACAAAAGATACATAAAAA
TAACCGCGGGCAATAATTAAAACTAGAACTACAGCAGGCACTTCCTCTTC
GAAGCCCGGCTTAGCACTTCACCTCCTTCAATGCATCAGCAATATACAAA
AATGTTGGGTCGGTCGCACCTTCCTTGTAGTAAGCAAAGACAAGACAGCC
ATCATCATGCATGCTCTCCCCAACAAAGAATTGAAGGTCACTGAGCTTCG
AGAGCAAGAACTTGGTCGCTCCCTCAATATTCTTCTTAAATATCTCCTGC
CTCTCCTCACTCAGCTTGGGCGTCAGCAACTTGATGAATCTCTTCATGTA
TGTTACAAACTGCTTCTTGTCAAAAGCAGGTTGCTCCTGCAGCCTGAATG
TGTCGACAATGTCGACCACCTTCACGGCTTGGTCATCAACACCCTCATCC
TCATCAGCTCCTTCGGCAGAAGGATTTGCACCAATGTCAACATCAACGGC
TCCTTGTACAACCCACTTTCCCTCAACTTCCCACAGAATCCCATTCTCAG
TTTCCTTGTAGGGAAAAGAGTCGGAGAGAAGCTCATCAC
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