CN188378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188378 vs. ExPASy Swiss-Prot
Match: TCTP_XENLA (Translationally-controlled tumor protein homolog OS=Xenopus laevis GN=tpt1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12 Identity = 49/163 (30.06%), Postives = 73/163 (44.79%), Query Frame = -3 Query: 214 DELLSDSFPYKETENGILWEVEGKWVV--QGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 687 DE+ SD + ET +G+ EVEGK + +GA+D + + VDIV +LQE F K + Y+K ++K L L + ER F K + K +L + QF+ GE M+ DG + Y+E P ++ D L KC Sbjct: 11 DEMFSDIYKIIETPDGMCLEVEGKVIQREEGAIDDALIGGNASAEFQEDDVGGSSLTSGVDIVMNHKLQET-GFTKDSYKNYIKDYVKQLKAHLEKTNPERVNTFMKGAQETVKKILGNFKNYQFYTGERMNPDGMVGLLDYREDGITPFMIFFKDGLIIEKC 172
BLAST of CN188378 vs. ExPASy Swiss-Prot
Match: TCTP_WUCBA (Translationally-controlled tumor protein homolog OS=Wuchereria bancrofti PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.787e-11 Identity = 56/171 (32.75%), Postives = 82/171 (47.95%), Query Frame = -3 Query: 217 DELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFFVGESMHD---DGCLVFAYYK--EGATDPTFLYIADALKEVK 687 DEL SDSFP K + G++WE +G+ VV+ ++ + GANPS + +D V RLQE + D F +Y K F+K + + SE FK+ I+ LLSK LQFF+GE M + +G + Y+ E P + + +AL E K Sbjct: 11 DELASDSFPMKLVD-GLIWEFKGRQVVRREGEIQLAGANPSTEGEDGDEGSEECVERGIDFVLNHRLQEMNCYEDLATFKSYCKSFMKKVVELMQKNGKSEAEISEFKRKIQAWVVSLLSKDRFKQLQFFIGERMAEGQGEGQVAVVEYRDEEEGEVPYLMLVKEALVEEK 180
BLAST of CN188378 vs. ExPASy Swiss-Prot
Match: TCTP_SCHJA (Translationally-controlled tumor protein homolog OS=Schistosoma japonicum GN=TCTP PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11 Identity = 47/162 (29.01%), Postives = 79/162 (48.77%), Query Frame = -3 Query: 217 DELLSDSFPYKETENGILWEVEGKWV-VQGAVDVD-IGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 687 DE+ SDS + N +++EV+ ++ V +D I ANPS +V+D+V RL +FDKK + Y+K ++K + +L +E E IF+ I + D + ++GESM+ DG + ++E P F+++ D L E K Sbjct: 11 DEMFSDSHS-PQLINDVVYEVDANFITVSNGLDSKLIAANPSGEEGQEEVSDSTE--RVIDLVHASRLVST-SFDKKSYRAYLKGYLKAIKERLQKENPERVSIFESRINEYMVNVFKNFDDYEHYIGESMNPDGMVALMNFRENGVTPYFVFLKDGLIEEK 168 The following BLAST results are available for this feature:
BLAST of CN188378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188378 ID=CN188378; Name=CN188378; organism=Citrus sinensis; type=EST; length=689bpback to top |