CN188375

Overview
NameCN188375
Unique NameCN188375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.185e-23
Identity = 63/207 (30.43%), Postives = 106/207 (51.21%), Query Frame = 3
Query:  129 REKAMKAGEAANNDLLGILMETSFREIEEHGNNKNV----GFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            +E  + + +    D L ++M +       H N+K+       S  ++  +  +F FAG ETTS  L++T+  L+ H D Q++ + E+ +   N  P  YD +  ++ + M+L E LRLYP    L R   K+ +L  + +P G  + +P   +H DP+ W +   EF+PERF++  +K + +   Y PF  GPR C+G  F     K
Sbjct:  257 KESRLDSKQKHRVDFLQLMMNS-------HNNSKDKVSHKALSDMEITAQSIIFIFAGYETTSSTLSFTLHSLATHPDIQKKLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWSEPE-EFQPERFSKE-NKGSIDPYVYLPFGNGPRNCLGMRFALMNMK 454          

HSP 2 Score: 24.6386 bits (52), Expect = 3.185e-23
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FAL+  K+A T I+QN+S
Sbjct:  448 FALMNMKLALTKIMQNFS 465          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3AV_MESAU (Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CYP3A31 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.186e-23
Identity = 60/207 (28.99%), Postives = 112/207 (54.11%), Query Frame = 3
Query:  123 KNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMND--VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNN-KPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            K +E  +   +    D L ++M +       H N+K+   +++D  +I +  +F FAG +TTS  L++ + LL+ H D Q++ ++E+     N  +P YD +  ++ + M+L E LRLYP  + L R   ++ ++  + +P G  + +P+  +H DP+ W  +  +F+PERF++  +K + +   + PF  GPR C+G  F     K
Sbjct:  254 KTKENRLDYNQKHRVDFLQLMMNS-------HDNSKDSHKALSDMEIIAQSIIFIFAGYDTTSSTLSFALYLLATHPDVQKKLQEEIDIALPNKARPSYDKVMEMEYLDMVLNETLRLYPIGSRLERVCKQDVEMDGVFVPKGSIVMVPVFALHYDPQYW-PEPEKFRPERFSKE-NKGSIDPYIFLPFGNGPRNCIGMRFALMNMK 451          

HSP 2 Score: 25.0238 bits (53), Expect = 3.186e-23
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FAL+  K+A T +LQN+S
Sbjct:  445 FALMNMKLALTKVLQNFS 462          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4D1_DROME (Cytochrome P450 4d1 OS=Drosophila melanogaster GN=Cyp4d1 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23
Identity = 67/207 (32.37%), Postives = 110/207 (53.14%), Query Frame = 3
Query:  117 IIKNREKAMKAG---EAANNDL-LGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            I++ RE+ ++ G   E++N+D  +G   + +F +I           S  D+ EE   F F G +TTS  L +    ++ H + Q++  +E+  V GN+K     Y+ LN L  V + + E LR+YP V +L R VL++ ++    +PAG  IG+  + + +  EL+ +    FKPERF    +    N  +Y PF+ GPR C+GQ F
Sbjct:  256 IVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPN-SFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKF 461          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3AG_MOUSE (Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.393e-23
Identity = 59/190 (31.05%), Postives = 107/190 (56.32%), Query Frame = 3
Query:  168 DLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            D + ++ME ++ + ++  ++K    S  ++  +  +F FAG ETTS +L++T+  L+ H D Q++ ++E+ +   N  P  YD +  ++ + M+L E LRLYP    L R   K+ ++  + +P G  + +P  ++H DP+ W  +  EF+PERF++  +K + +   Y PF  GPR C+G  F     K
Sbjct:  270 DFIYLMME-AYNKSKDKDSHK--ALSEIEITAQSIIFIFAGYETTSSILSFTVYSLATHPDIQKKLQEEIDEALPNKAPPTYDTVMAMEYLDMVLNETLRLYPITNRLQRVCKKDVEINGIYIPKGSTVIIPSYVLHHDPQHW-PEPEEFQPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMK 454          

HSP 2 Score: 22.7126 bits (47), Expect = 5.393e-23
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FAL+  K+A   +LQN+S
Sbjct:  448 FALMNMKLALIKVLQNFS 465          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 7.149e-23
Identity = 52/156 (33.33%), Postives = 90/156 (57.69%), Query Frame = 3
Query:  252 DVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            +++ +  +F F G ETTS  L++ +  L+ H D Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +++P G  + +P+ ++H +PE W  +  EF+PERF++  +K   N   Y PF  GPR CVG  F
Sbjct:    5 ELVAQTTIFIFGGYETTSTSLSFIIYELATHPDVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLERLCKKDVEIHGVSIPKGTTVMVPLFVLHNNPEFW-PEPEEFRPERFSKK-NKDGINPYVYLPFGTGPRNCVGMRF 158          

HSP 2 Score: 23.483 bits (49), Expect = 7.149e-23
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FAL+  K+A   ILQN+S
Sbjct:  158 FALMNIKLALVRILQNFS 175          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4F3_RAT (Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus norvegicus GN=Cyp4f3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.920e-22
Identity = 67/206 (32.52%), Postives = 108/206 (52.43%), Query Frame = 3
Query:  132 EKAMKA-GEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            + A+KA  +A   D + +L+ +     +EHG       S  D+  E   F F G +TT+  L+W +  L+KH ++QER RQEV ++  + +P   ++D L  L  + M + E LRL+PP T +SR   ++  L     +P GV   + +   H +P +W D  V + P RF     K  ++ +++ PF+ GPR C+GQ F  S  K
Sbjct:  284 DDALKAKAKAKTLDFIDVLLLSK----DEHGE----ALSDEDIRAEADTFMFGGHDTTASGLSWILYNLAKHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPATAISRCCTQDIMLPDGRVIPKGVICRISIFGTHHNPAVWPDPEV-YNPFRFDADNGK-GRSPLAFIPFSAGPRNCIGQTFAMSEMK 479          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4D1_DROSI (Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4d1 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.920e-22
Identity = 66/207 (31.88%), Postives = 109/207 (52.66%), Query Frame = 3
Query:  117 IIKNREKAMKAG---EAANNDL-LGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            I++ RE+ ++ G   E++ +D  +G   + +F +I           S  D+ EE   F F G +TTS  L +    ++ H + Q++  +E+  V GN+K     Y+ LN L  V + + E LR+YP V +L R VL++ ++    +PAG  IG+  + + +  EL+ +    FKPERF    +    N  +Y PF+ GPR C+GQ F
Sbjct:  256 IVQRREELIREGSSQESSKDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPN-SFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKF 461          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3A5_HUMAN (Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.011e-22
Identity = 62/207 (29.95%), Postives = 109/207 (52.66%), Query Frame = 3
Query:  126 NREKAMKAGEAANN--DLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            NR K  +  +   +  D L +++++ + +E E H    ++  +   +I     F FAG ETTS +L++T+  L+ H D Q++ ++E+  V  N  P  YD +  ++ + M++ E LRL+P    L R   K+ ++  + +P G  + +P   +H DP+ W  +  EF+PERF++   K + +   Y PF  GPR C+G  F     K
Sbjct:  254 NRMKKSRLNDKQKHRLDFLQLMIDSQNSKETESHKALSDLELAAQSII-----FIFAGYETTSSVLSFTLYELATHPDVQQKLQKEIDAVLPNKAPPTYDAVVQMEYLDMVVNETLRLFPVAIRLERTCKKDVEINGVFIPKGSMVVIPTYALHHDPKYW-TEPEEFRPERFSK--KKDSIDPYIYTPFGTGPRNCIGMRFALMNMK 452          

HSP 2 Score: 22.7126 bits (47), Expect = 2.011e-22
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FAL+  K+A   +LQN+S
Sbjct:  446 FALMNMKLALIRVLQNFS 463          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP341_MOUSE (Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.507e-22
Identity = 62/201 (30.85%), Postives = 106/201 (52.74%), Query Frame = 3
Query:  129 REKAMKAGEAANNDLLGILMETSFREIEEHGNNKNV----GFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            +E  + + +    D L ++M         H N+K+       S  ++  +  +F FAG ETTS  L++T+  L+ H D Q++ ++E+ +   N  P  YD +  ++ + M+L E LRLYP    L R   K+ +L  + +P G  + +P   +H DP+ W  +  EF+PERF++  +K + +   Y PF +GPR C+G  F
Sbjct:  257 KESRLDSKQKHRVDFLQLMMNA-------HNNSKDKDSHKALSDMEITAQSIVFIFAGYETTSSTLSFTLYCLATHPDIQKKLQEEIDETLPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERFCKKDVELNGVYIPKGSTVMIPSYALHHDPQHW-PEPEEFQPERFSKE-NKGSIDPYLYMPFGIGPRNCIGMRF 448          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.275e-22
Identity = 59/183 (32.24%), Postives = 105/183 (57.38%), Query Frame = 3
Query:  189 ETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            E  F + E    +K++ F  +++I +  +F  AG +TT++ L+++  LL+ H + Q++ ++EV +   + +  +D L+ LK ++ ++ E LRLYP  +++ +R  LK T +  + + AG  I +    +H DP++WGDD  EFKPER+  G  +    +  Y PF +GPRIC+G        K
Sbjct:  296 EQDFAKSEVLKVDKHLTF--DEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDRECPDPEVTFDQLSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESG-DELFFAKGGYLPFGMGPRICIGMRLAMMEMK 475          
The following BLAST results are available for this feature:
BLAST of CN188375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
CP3AB_MOUSE3.185e-2330.43Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]
CP3AV_MESAU3.186e-2328.99Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CY... [more]
CP4D1_DROME3.868e-2332.37Cytochrome P450 4d1 OS=Drosophila melanogaster GN=... [more]
CP3AG_MOUSE5.393e-2331.05Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE... [more]
CP3AJ_CAPAE7.149e-2333.33Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus ... [more]
CP4F3_RAT1.920e-2232.52Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus nor... [more]
CP4D1_DROSI1.920e-2231.88Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4... [more]
CP3A5_HUMAN2.011e-2229.95Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1... [more]
CP341_MOUSE2.507e-2230.85Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a P... [more]
C13A7_CAEEL3.275e-2232.24Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188375 ID=CN188375; Name=CN188375; organism=Citrus sinensis; type=EST; length=769bp
GAGGCACAATGCAAGTCTTTCGTTCAGTTCACATTCCAGGATGGAGGTTT
TTACCTACAAAGAGAAATAGGAGAATGAAAGAAATTGACAAGGAAATCCG
GGCTTCATTGATGGGAATCATCAAAAATAGGGAGAAGGCAATGAAAGCAG
GGGAAGCTGCGAATAATGACTTGTTAGGCATACTGATGGAAACCAGTTTT
AGAGAGATTGAAGAACATGGAAATAACAAAAATGTTGGGTTCAGCATGAA
CGATGTGATCGAAGAGTGTAAGCTATTTTACTTTGCCGGCCAAGAGACTA
CCTCTGTTTTGCTTAATTGGACGATGGTCTTATTGAGCAAGCATCAAGAT
TGGCAAGAACGTGCAAGGCAAGAGGTTTTGCAAGTGTTTGGCAATAATAA
GCCCGACTATGATGGATTGAATCACCTCAAAATTGTCCAGATGATACTTT
ATGAGGTACTCAGGCTTTATCCGCCCGTAACTATGCTTAGTCGAGCTGTT
CTTAAGGAAACGAAACTCGGAAACTTGACATTACCCGCTGGGGTTCAAAT
TGGCTTGCCAATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACG
ATGCAGTTGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCG
GCGAAAAATCAAGTTTCATATTTCCCATTCGCATTGGGTCCTAGGATATG
TGTTGGACAAAATTTTTGCTCTAGTAGAAGCAAAAATGGCCACGACAATG
ATTCTTCAAAACTACTCAT
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