CN188375

Overview
NameCN188375
Unique NameCN188375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3A1_RAT (Cytochrome P450 3A1 OS=Rattus norvegicus GN=Cyp3a1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.650e-21
Identity = 57/207 (27.54%), Postives = 104/207 (50.24%), Query Frame = 3
Query:  117 IIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            + + +E  + + +    D L ++M       +      +   S  ++  +  +F FAG E TS  L++ +  L+ H D Q++ ++E+ +   N  P  YD +  ++ + M+L E LRLYP    L R   K+ ++  + +P G  + +P   +H+DP+ W  +  EF+PERF++  +K + +   Y PF  GPR C+G  F     K
Sbjct:  253 VYRMKETRLDSVQKHRVDFLQLMMNA---HNDSKDKESHTALSDMEITAQSIIFIFAGYEPTSSTLSFVLHSLATHPDTQKKLQEEIDRALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERVCKKDVEINGVFMPKGSVVMIPSYALHRDPQHW-PEPEEFRPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMK 454          

HSP 2 Score: 25.0238 bits (53), Expect = 1.650e-21
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FAL+  K+A T +LQN+S
Sbjct:  448 FALMNMKLALTKVLQNFS 465          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4F6_RAT (Cytochrome P450 4F6 OS=Rattus norvegicus GN=Cyp4f6 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.123e-21
Identity = 60/179 (33.52%), Postives = 98/179 (54.75%), Query Frame = 3
Query:  210 EEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            +EHG     G S  D+  E   F F G +TT+  L+W +  L++H ++QER RQEV ++  + +P   ++D L  L  + M + E LRL+PPV ++SR   ++  L     +P G    + +  VH +P +W D  V + P RF +  +   ++ +++ PF+ GPR C+GQ F  S  K
Sbjct:  307 DEHGK----GLSDVDIRAEADTFMFGGHDTTASALSWILYNLARHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPVLLISRCCSQDIVLPDGRVIPKGNICVISIFGVHHNPSVWPDPEV-YNPFRF-DPENPQKRSPLAFIPFSAGPRNCIGQTFAMSEIK 479          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C13A4_CAEEL (Putative cytochrome P450 CYP13A4 OS=Caenorhabditis elegans GN=cyp-13A4 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.123e-21
Identity = 57/193 (29.53%), Postives = 109/193 (56.48%), Query Frame = 3
Query:  159 ANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            AN D +       F + E    +K++ F  +++I +  +F  AG +TT++ L+++  LL+ H + Q++ ++EV +   + +  +D ++ LK ++ ++ E LR+YP  +++ +R  +K+T +  + +  G  + +    +H DP++WGDDA EFKPER+  G  +    +  Y PF +GPRIC+G        K
Sbjct:  286 ANVDFIEEESTLGFAKSEVLKVDKHLTF--DEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDRECPDPEVTFDQISKLKYMECVVKEALRMYPLASLVHNRKCMKKTNVLGVEIDEGTNVQVDTWTLHYDPKVWGDDASEFKPERWETG-DELFYAKGGYLPFGMGPRICIGMRLAMMEEK 475          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3A7_HUMAN (Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.147e-21
Identity = 61/201 (30.35%), Postives = 108/201 (53.73%), Query Frame = 3
Query:  129 REKAMKAGEAANNDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVS---YFPFALGPRICVGQNF 716
            +E  +K  +    D L +++++ + ++ E H        S  +++ +  +F FAG ETTS +L++ +  L+ H D Q++ ++E+  V  N  P  YD +  L+ + M++ E LRL+P    L R   K+ ++  + +P GV + +P  ++H DP+ W +   +F PERF    SK  K+ +    Y PF  GPR C+G  F
Sbjct:  257 KEGRLKETQKHRVDFLQLMIDSQNSKDSETHK-----ALSDLELMAQSIIFIFAGYETTSSVLSFIIYELATHPDVQQKVQKEIDTVLPNKAPPTYDTVLQLEYLDMVVNETLRLFPVAMRLERVCKKDVEINGMFIPKGVVVMIPSYVLHHDPKYWREPE-KFLPERF----SKKNKDNIDPYIYTPFGSGPRNCIGMRF 447          

HSP 2 Score: 24.2534 bits (51), Expect = 2.147e-21
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FALV  K+A   +LQN+S
Sbjct:  447 FALVNMKLALVRVLQNFS 464          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4FE_MOUSE (Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus GN=Cyp4f14 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.772e-21
Identity = 57/172 (33.14%), Postives = 92/172 (53.49%), Query Frame = 3
Query:  243 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGD----DAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            S  D+  E   F F G +TT+  L+W +  L++H ++QER RQEV ++    +P   ++D L  L  + M + E LRL+PPVT++SR   ++  L    T+P G+   + +  +H +P +W D    D   F PE   +       + +++ PF+ GPR C+GQ F  S  K
Sbjct:  314 SDEDIRAEADTFMFEGHDTTASGLSWILYNLARHPEYQERCRQEVQELLRGREPEEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVWPDPEVYDPFRFDPENIKD------SSPLAFIPFSAGPRNCIGQTFAMSEMK 479          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3A8_MACFA (Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3A8 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.725e-21
Identity = 62/221 (28.05%), Postives = 115/221 (52.04%), Query Frame = 3
Query:   78 KEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            +E+   +R S+  I   +E  +K  +    D L +++++ + +E E H        S  +++ +  +F FAG ETTS +L++ +  L+ H D Q++ ++E+  V  N  P  YD +  ++ + M++ E LR++P    L R   K+ ++  + +P GV + +P   +H DP+ W  +  +F PERF++  +      + Y PF  GPR C+G  F     K
Sbjct:  243 REVTSFLRKSVKRI---KESRLKDTQKHRVDFLQLMIDSQNSKETESHK-----ALSDLELVAQSIIFIFAGYETTSSVLSFIIYELATHPDVQQKLQEEIDTVLPNKAPPTYDTVLQMEYLDMVVNETLRIFPIAMRLERVCKKDVEINGIFIPKGVVVMIPSYALHHDPKYW-PEPEKFLPERFSKKNNDNIDPYI-YTPFGSGPRNCIGMRFALMNMK 453          

HSP 2 Score: 22.7126 bits (47), Expect = 4.725e-21
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FAL+  K+A   +LQN+S
Sbjct:  447 FALMNMKLAIIRVLQNFS 464          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3A6_RABIT (Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CYP3A6 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 6.147e-21
Identity = 61/200 (30.50%), Postives = 107/200 (53.50%), Query Frame = 3
Query:  123 KNREKAMKAGEAANNDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            K ++  +K  +    D L +++ + + +EI+ H    ++     +V+ +  +  FAG ETTS  L++ M LL+ H D Q++ ++E+  +  N +   YD L  ++ + M++ E LRLYP    L R   K+  +    +P G  + +P   +H+DP+ W  +  EF+PERF++  +K   N   Y PF  GPR C+G  F
Sbjct:  253 KIKDDRLKDKQKRRVDFLQLMINSQNSKEIDSHKALDDI-----EVVAQSIIILFAGYETTSSTLSFIMHLLATHPDVQQKLQEEIDTLLPNKELATYDTLVKMEYLDMVVNETLRLYPIAGRLERVCKKDVDINGTFIPKGTIVMMPTYALHRDPQHW-TEPDEFRPERFSKK-NKDNINPYIYHPFGAGPRNCLGMRF 445          

HSP 2 Score: 21.9422 bits (45), Expect = 6.147e-21
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FAL+  K+A   ++QN+S
Sbjct:  445 FALMNIKLALVRLMQNFS 462          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C4D21_DROME (Probable cytochrome P450 4d21 OS=Drosophila melanogaster GN=Cyp4d21 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.176e-21
Identity = 65/201 (32.34%), Postives = 106/201 (52.74%), Query Frame = 3
Query:  150 GEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDG------LNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            G  A   LL IL++ +           N   S  D+ EE  +F FAG +TT+  ++  +  +S+H   QE   +E++ V G   PD D       L  LK +  ++ E +RL+PPV +L R + ++ K+G +T+P    I L    V++DPE + D  V FKPER+ +  + +    ++Y PF+ GP+ C+GQ F + + K
Sbjct:  280 GGKAKMTLLDILLQATI---------DNKPLSDVDIREEVDVFIFAGDDTTTSGVSHALHAISRHPKVQECIYEELVSVLG---PDPDASVTQTKLLELKYLDCVIKETMRLHPPVPILGRYIPEDLKIGEITIPGNTSILLMPYYVYRDPEYFPDPLV-FKPERWMDMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMK 467          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C4D10_DROMT (Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp4d10 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.176e-21
Identity = 61/205 (29.76%), Postives = 104/205 (50.73%), Query Frame = 3
Query:  117 IIKNREKAMKAGEAANNDL--LGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD---YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            I++ RE+ ++ G     D   +G   +  F +I    N  +   +  D+ EE   F F G +TTS  + +    ++ + + Q +  +E++ V G +      YD LN+L  + + + E LR+YP V +L R VL+E ++    +PAG  IG+  + + +  ++   +   FKPERF    S    N  +Y PF+ GPR C+GQ F
Sbjct:  259 IVQRREELLRGGVTQTTDGADVGAKSKMVFLDILLQSNIDDKPLTNLDIREEVDTFMFEGHDTTSSGITFFFYNIALYPECQRKCVEEIVSVLGKDTETPVTYDLLNNLNYMDLCIKETLRMYPSVPLLGRKVLQECEINGKIIPAGTNIGISPLFLGRSEDI-SSEPNTFKPERFDVVTSAEKLNPHAYIPFSAGPRNCIGQKF 462          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4C3_DROME (Cytochrome P450 4c3 OS=Drosophila melanogaster GN=Cyp4c3 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.066e-21
Identity = 61/218 (27.98%), Postives = 111/218 (50.92%), Query Frame = 3
Query:   90 KEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK---PDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            +E +A L  + +N          A +D+ G     +F ++    + +    S  D+ EE   F F G +TTS  ++WT+ LL  H ++QER  +E+  +FG++K        L  ++ ++  + + LRL+P V M++R V ++  +G   +PAG Q  +    +H++P ++     +F P+ F    + A ++  +Y PF+ GPR C+GQ F     K
Sbjct:  278 RERKAELAILQENNNNNNNNAPDAYDDV-GKKKRLAFLDLLIDASKEGTVLSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVF-PKPEQFNPDNFLPE-NCAGRHPFAYIPFSAGPRNCIGQKFAILEEK 492          
The following BLAST results are available for this feature:
BLAST of CN188375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
CP3A1_RAT1.650e-2127.54Cytochrome P450 3A1 OS=Rattus norvegicus GN=Cyp3a1... [more]
CP4F6_RAT2.123e-2133.52Cytochrome P450 4F6 OS=Rattus norvegicus GN=Cyp4f6... [more]
C13A4_CAEEL2.123e-2129.53Putative cytochrome P450 CYP13A4 OS=Caenorhabditis... [more]
CP3A7_HUMAN2.147e-2130.35Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1... [more]
CP4FE_MOUSE2.772e-2133.14Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus... [more]
CP3A8_MACFA4.725e-2128.05Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3... [more]
CP3A6_RABIT6.147e-2130.50Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CY... [more]
C4D21_DROME6.176e-2132.34Probable cytochrome P450 4d21 OS=Drosophila melano... [more]
C4D10_DROMT6.176e-2129.76Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp... [more]
CP4C3_DROME8.066e-2127.98Cytochrome P450 4c3 OS=Drosophila melanogaster GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188375 ID=CN188375; Name=CN188375; organism=Citrus sinensis; type=EST; length=769bp
GAGGCACAATGCAAGTCTTTCGTTCAGTTCACATTCCAGGATGGAGGTTT
TTACCTACAAAGAGAAATAGGAGAATGAAAGAAATTGACAAGGAAATCCG
GGCTTCATTGATGGGAATCATCAAAAATAGGGAGAAGGCAATGAAAGCAG
GGGAAGCTGCGAATAATGACTTGTTAGGCATACTGATGGAAACCAGTTTT
AGAGAGATTGAAGAACATGGAAATAACAAAAATGTTGGGTTCAGCATGAA
CGATGTGATCGAAGAGTGTAAGCTATTTTACTTTGCCGGCCAAGAGACTA
CCTCTGTTTTGCTTAATTGGACGATGGTCTTATTGAGCAAGCATCAAGAT
TGGCAAGAACGTGCAAGGCAAGAGGTTTTGCAAGTGTTTGGCAATAATAA
GCCCGACTATGATGGATTGAATCACCTCAAAATTGTCCAGATGATACTTT
ATGAGGTACTCAGGCTTTATCCGCCCGTAACTATGCTTAGTCGAGCTGTT
CTTAAGGAAACGAAACTCGGAAACTTGACATTACCCGCTGGGGTTCAAAT
TGGCTTGCCAATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACG
ATGCAGTTGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCG
GCGAAAAATCAAGTTTCATATTTCCCATTCGCATTGGGTCCTAGGATATG
TGTTGGACAAAATTTTTGCTCTAGTAGAAGCAAAAATGGCCACGACAATG
ATTCTTCAAAACTACTCAT
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