CN188375

Overview
NameCN188375
Unique NameCN188375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP17A_RANDY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana dybowskii GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.167e-11
Identity = 51/199 (25.63%), Postives = 96/199 (48.24%), Query Frame = 3
Query:  126 NREKAMKAGEAANNDLLGILMETSFREIEEHGN-NKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEV-LQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFA-EGISKAAKNQVSYFPFALGPRICVGQ 710
            N  K    GE    DL+  L++        + N +++VG + + ++      + AG ETTS +L W +  L  + + Q++ ++E+ ++V     P       L   +  + EVLR+ P   +L     LKE+ +G  T+P   ++ + +  +H D + W +  + F P+RF  E  ++      S+ PF  G R+C+G+
Sbjct:  262 NEHKDAFCGETVK-DLVDALLKAKLNMENNNSNVSQDVGLTEDHILMTVGDIFGAGVETTSTVLKWAVAYLLHYPEVQKKIQEELDVKVGFGRYPLLSDRKILHYTEAAISEVLRIRPVSPLLIPHVALKESSIGEYTIPKEARVVINLWSLHHDEKEWVNPHL-FSPDRFLDENGNRVYSPSPSFLPFGAGIRVCLGE 458          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CCD1D_DROME (Probable cytochrome P450 12d1 distal, mitochondrial OS=Drosophila melanogaster GN=Cyp12d1-d PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.167e-11
Identity = 62/234 (26.50%), Postives = 107/234 (45.73%), Query Frame = 3
Query:   42 WRFLPTKRNRRMKE-IDKEIRASLMGIIKNR---EKAMKAGEAAN-NDLLGILMETSFREIEEHGNNKNVGFSMN-DVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP--DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVS---YFPFALGPRICVGQ 710
            W+ + T   R+MK  ++  +  S   + +N+   EK  +AGE  N N +L  LME           +  V   M+ D++       FAG + T+ LL+  ++ LSKH D Q + R+E+L +        + + +  +  ++ ++ E LR YP      R    +  L    +P G  + L   ++ ++   +     EF PER+        K QVS   + PF  GPR+C+G+
Sbjct:  255 WKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEI----------DPKVAVIMSLDIL-------FAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYY-PRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGK 470          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.167e-11
Identity = 60/224 (26.79%), Postives = 106/224 (47.32%), Query Frame = 3
Query:   66 NRRMKEIDKEIRASLMGIIKNREKAMK-----AGEAANNDLLGILMETSFREIEEHGNNK-NVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAE-GISK--AAKNQVSYFPFALGPRICVG 707
            N+R+++      A L  IIK RE+  +      G     D+L +L++    +  E    K N+   + D+       + AG +T++  + W M  L  +    E+ARQE+  V GN++  +   + +L  +Q I+ E LR++P   ++ R   K   +    +PA  ++ + +  + +DP  W ++  EF+PERF E G S+         + PF  G R C G
Sbjct:  227 NKRIRKTRIRFDAVLDRIIKQREEERRNNKEIGGTRQFKDILDVLLDIGEDDSSEIKLTKENIKAFIMDI-------FVAGTDTSAATMEWAMAELINNPCVLEKARQEIDAVVGNSRIIEESDIVNLPYLQAIVRETLRIHPGGPLIVRESSKSVVVCGYEIPAKTRLFVNVWAIGRDPNHW-ENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPG 442          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.167e-11
Identity = 41/149 (27.52%), Postives = 76/149 (51.01%), Query Frame = 3
Query:  279 YFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDG-LNHLKIVQMILYEVLRLYP--PVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYF---PFALGPRICVG 707
            + AG +T+S ++ W +  L K++    RA+ E+ +V G ++   +  + +L  +Q I  E  R +P  P+ +    +     +    +P G ++ + +  + +DP +WGD+  EF PERF  G +     + ++F   PF  G RIC G
Sbjct:  307 FTAGTDTSSSIIEWALAELLKNRTLLTRAQDEMDRVIGRDRRLLESDIPNLPYLQAICKETFRKHPSTPLNLPRNCIRGHVDVNGYYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAG 455          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP6D3_MUSDO (Cytochrome P450 6d3 OS=Musca domestica GN=CYP6D3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.525e-11
Identity = 54/225 (24.00%), Postives = 109/225 (48.44%), Query Frame = 3
Query:   60 KRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNN--KPD----YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN--LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQ 710
            KR    +E +  +R  L+ ++       K  +  +ND L   +E++   ++          S++ +     LFY AG ETT+   ++T+  L+ + +  ++A+ EV +    +  KPD    Y+ +  +K + + + E  R YP +  L+R   ++ K+ N   T+     + + ++ +H+D + +  + + +KPERFA+       +  +Y PF  GPR C+ Q
Sbjct:  253 KRTIEFREENNVVRKDLLHLLIQLRNTGKISD--DNDNLWNKVESTATNLK--------AMSIDMIASNSFLFYIAGSETTASSTSFTIYELAMNPEALKKAQNEVDECLKKHGIKPDGRITYEAIQDMKYLDLCVKETTRKYPGLPFLNRQCTQDFKVPNSKFTIKKDTNVIISLLGLHRDAKYF-PEPLAYKPERFAD--ETKDYDAAAYMPFGEGPRHCIAQ 464          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP2W1_HUMAN (Cytochrome P450 2W1 OS=Homo sapiens GN=CYP2W1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.525e-11
Identity = 43/143 (30.07%), Postives = 68/143 (47.55%), Query Frame = 3
Query:  285 AGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQ 710
            AG ETTS  L W  +L+ +H D Q R ++E+ +V G  + P  +    L     +L+EV R    +  + R    +T+LG   LP G  +   +  V  D   W     +F P  F +      K + ++ PF+ G R+CVG+
Sbjct:  296 AGTETTSATLQWAALLMGRHPDVQGRVQEELDRVLGPGRTPRLEDQQALPYTSAVLHEVQRFITLLPHVPRCTAADTQLGGFLLPKGTPVIPLLTSVLLDETQWQTPG-QFNPGHFLDANGHFVKRE-AFLPFSAGRRVCVGE 436          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP18A_DROME (Cytochrome P450 18a1 OS=Drosophila melanogaster GN=Cyp18a1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.525e-11
Identity = 45/146 (30.82%), Postives = 76/146 (52.05%), Query Frame = 3
Query:  279 YFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTMLS-RAVLKETKLGNLTLPAGVQIGLPMI-LVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVG 707
            + AG ET    L W  V + ++     R + E+ QV G ++ P  + L +L I +  + E +R    V + +  +  ++ +L   T+PAG  + +P+I  VH DP LW +   EF+P RF +   K  K +  + PF +G R+C+G
Sbjct:  326 FSAGMETIKTTLLWINVFMLRNPKEMRRVQDELDQVVGRHRLPTIEDLQYLPITESTILESMRRSSIVPLATTHSPTRDVELNGYTIPAGSHV-IPLINSVHMDPNLW-EKPEEFRPSRFIDTEGKVRKPEY-FIPFGVGRRMCLG 468          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP17A_HORSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Equus caballus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.525e-11
Identity = 56/235 (23.83%), Postives = 106/235 (45.11%), Query Frame = 3
Query:   36 PGWRFLPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVG-------FSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGI-SKAAKNQVSYFPFALGPRICVGQ 710
            P  +  P K   +M+     IR  L+  I  + K     E  N+D +  +++    + +++ +N N G        S   ++      + AG ETT+ ++ W +  L      +++ ++E+ Q  G ++ P     N L +++  + EVLR+ P   ML     L ++ +G   +  G  + + +  +H + + W      F PERF +   S+     +SY PF  GPR C+G+
Sbjct:  219 PALKIFPNKSLEKMRHC-VNIRNELLSKIFEKHK-----ENFNSDSITSMLDLLI-QAKKNSDNNNTGPDQDSKLLSDKHILATIGDIFGAGVETTTSVVKWIVAFLLHDPQLKKKIQEEIDQNVGFSRTPTLSDRNRLLLLEATIREVLRIRPVAPMLIPHKALVDSSIGEFAVDDGTNVIINLWALHHNEKEWHQPD-RFMPERFLDPTGSQLISPSLSYLPFGAGPRSCIGE 445          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.525e-11
Identity = 62/232 (26.72%), Postives = 100/232 (43.10%), Query Frame = 3
Query:   57 TKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANND--LLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDG-LNHLKIVQMILYEVLRLYPPVTMLSRAVLKET-KLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAK-------NQVSYFPFALGPRICVGQNF 716
            T   RR+    + + A    I+   E   +  E    D   LG+L+    R  ++ G  +  G S   +          G ETTS    W M  L +  +   +A+ EV        P D++G ++ L   +M++ E LRL+P + +L     +ET  +G   +  G ++ +    + + PE W D   EF+PERFA+    +A        +Q  Y PF  G R+C G  F
Sbjct:  232 TGLTRRLWTARRRLDAIFDRILAECEARQRQEEKMTGDDGFLGVLL----RIRDDDGEPETGGISTTSIKAILFDMLAGGTETTSSAAEWIMSELMRKPEAMAKAQAEVRGALDGKSPEDHEGQMDKLSYTRMVVKEGLRLHPVLPLLLPRSCQETCDVGGFEVTKGTKVIVNAWALARSPERWHDPE-EFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTF 458          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.525e-11
Identity = 56/223 (25.11%), Postives = 101/223 (45.29%), Query Frame = 3
Query:   51 LPTKRNRRMKEIDKEIRASL-MGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEV-LQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRIC 701
            L  +R R ++++D      + + + KNRE++        +D + +L+    +E    G  K    + N +          G  T+++ + W M  L ++    ++ + E+  Q+  NNK      D +NHL  + M++ E  RL+P   +L  R V+ E K+   T+    ++ + +  + +DPE+W  D  EF PERF +             PF  G RIC
Sbjct:  233 LHARRERSVRDLDAFYEQMIDLHLQKNREES-------EDDFVDLLLRLE-KEEAVLGYGK---LTRNHIKAILMNILLGGINTSAITMTWAMAELIRNPRVMKKVQSEIRAQIGKNNKTRIISLDEINHLSYLNMVIKETCRLHPVAPLLVPREVISEFKINGYTIQPKTRLHVNVWAIGRDPEIW-KDPEEFLPERFMDCDIDVKGQDYELLPFGSGRRIC 443          
The following BLAST results are available for this feature:
BLAST of CN188375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
CP17A_RANDY1.167e-1125.63Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana d... [more]
CCD1D_DROME1.167e-1126.50Probable cytochrome P450 12d1 distal, mitochondria... [more]
C93A2_SOYBN1.167e-1126.79Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C75A4_GENTR1.167e-1127.52Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
CP6D3_MUSDO1.525e-1124.00Cytochrome P450 6d3 OS=Musca domestica GN=CYP6D3 P... [more]
CP2W1_HUMAN1.525e-1130.07Cytochrome P450 2W1 OS=Homo sapiens GN=CYP2W1 PE=2... [more]
CP18A_DROME1.525e-1130.82Cytochrome P450 18a1 OS=Drosophila melanogaster GN... [more]
CP17A_HORSE1.525e-1123.83Steroid 17-alpha-hydroxylase/17,20 lyase OS=Equus ... [more]
C99A1_SORBI1.525e-1126.72Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71BA_ARATH1.525e-1125.11Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188375 ID=CN188375; Name=CN188375; organism=Citrus sinensis; type=EST; length=769bp
GAGGCACAATGCAAGTCTTTCGTTCAGTTCACATTCCAGGATGGAGGTTT
TTACCTACAAAGAGAAATAGGAGAATGAAAGAAATTGACAAGGAAATCCG
GGCTTCATTGATGGGAATCATCAAAAATAGGGAGAAGGCAATGAAAGCAG
GGGAAGCTGCGAATAATGACTTGTTAGGCATACTGATGGAAACCAGTTTT
AGAGAGATTGAAGAACATGGAAATAACAAAAATGTTGGGTTCAGCATGAA
CGATGTGATCGAAGAGTGTAAGCTATTTTACTTTGCCGGCCAAGAGACTA
CCTCTGTTTTGCTTAATTGGACGATGGTCTTATTGAGCAAGCATCAAGAT
TGGCAAGAACGTGCAAGGCAAGAGGTTTTGCAAGTGTTTGGCAATAATAA
GCCCGACTATGATGGATTGAATCACCTCAAAATTGTCCAGATGATACTTT
ATGAGGTACTCAGGCTTTATCCGCCCGTAACTATGCTTAGTCGAGCTGTT
CTTAAGGAAACGAAACTCGGAAACTTGACATTACCCGCTGGGGTTCAAAT
TGGCTTGCCAATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACG
ATGCAGTTGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCG
GCGAAAAATCAAGTTTCATATTTCCCATTCGCATTGGGTCCTAGGATATG
TGTTGGACAAAATTTTTGCTCTAGTAGAAGCAAAAATGGCCACGACAATG
ATTCTTCAAAACTACTCAT
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