CN188375

Overview
NameCN188375
Unique NameCN188375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP52D_CANMA (Cytochrome P450 52A4 OS=Candida maltosa GN=CYP52A4 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11
Identity = 46/159 (28.93%), Postives = 79/159 (49.69%), Query Frame = 3
Query:  285 AGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP------DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN---------LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            AG++TT+ LL++    LS++    E+ ++E+   FG  +        ++ L   + ++  + E LR+YP V    R   + T L           + +  G  +   +   H+DP ++G+DA  F+PER+ E   +  K   +Y PF  GPRIC+GQ F
Sbjct:  334 AGRDTTAGLLSFLFFELSRNPTVFEKLKEEIHNRFGAKEDARVEEITFESLKLCEYLKACVNEALRVYPSVPHNFRVATRNTTLPRGGGKDGMSPIAIKKGQNVMYTISATHRDPSIYGEDANVFRPERWFE--PETRKLGWAYVPFNGGPRICLGQQF 490          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP51_UNCNE (Eburicol 14-alpha-demethylase OS=Uncinula necator GN=CYP51 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11
Identity = 60/254 (23.62%), Postives = 110/254 (43.31%), Query Frame = 3
Query:   54 PTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP----DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPM--ILVHQ-----------------DPELW--------GDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCS 722
            P   NR      + +  + M II+ R +  ++GE   +D++  LM +++++               ++         AGQ ++S   +W M+ L+   D  E   +E L++FG+ KP     Y+ L+ L++ Q +L EVLRL+ P+  + R      K+ N  +  G +  +P   +L+                   DP  W        G+DAV+ K + +  G++    +   Y PF  G   C+G+ F +
Sbjct:  240 PLPWNRARDHAQRTVARTYMNIIQARREEKRSGEN-KHDIMWELMRSTYKD--------GTPVPDREIAHMMIALLMAGQHSSSSTSSWIMLWLAARPDIMEELYEEQLRIFGSEKPFPPLQYEDLSKLQLHQNVLKEVLRLHAPIHSIMR------KVKNPMIVPGTKYVIPTSHVLISSPGCTSQDATFFPDPLKWDPHRWDIGSGKVLGNDAVDEKYD-YGYGLTSTGASS-PYLPFGAGRHRCIGEQFAT 476          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP2J1_RABIT (Cytochrome P450 2J1 OS=Oryctolagus cuniculus GN=CYP2J1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11
Identity = 49/214 (22.90%), Postives = 98/214 (45.79%), Query Frame = 3
Query:   90 KEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGN-NKPDYDGLNHLKIVQMILYEVLRLYPPVTM-LSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSS 725
            K++   +  +++N +K     E  +       ++   +E+ ++  +    F+  ++I      + AG ETTS +  W ++ ++ + + QE+   E+  V G   +P       L     +++EV R+   + + + R V  +T L    LP G  +   +  +H+DPE W      F PE F E  +   K + ++ PF++G R C+G+    S
Sbjct:  252 KKLELFVSRMLENHKKDWNPAETRD------FIDAYLKEMSKYPGSATSSFNEENLICSTLDLFLAGTETTSDM-RWGLLFMALYPEIQEKVHAEIDSVIGQWQQPSMASRESLPYTNAVIHEVQRMGNILPLNVPREVTVDTTLAGYHLPKGTVVLTNLTALHKDPEEWATPDT-FNPEHFLE--NGQFKKKEAFIPFSIGKRACLGEQLAKS 455          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP1A1_MOUSE (Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11
Identity = 60/233 (25.75%), Postives = 110/233 (47.21%), Query Frame = 3
Query:   33 IPGWRFLPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILME-TSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLR--LYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF---AEGISKAAKNQVSYFPFALGPRICVGQ 710
            IP  R+LP       K+++ +  + +  +IK   +  + G     D+   L+E    R+++E   N NV  S + VI      + AG +T +  ++W+++ L  +   Q + ++E+  V G ++ P       L  ++  + E  R   + P T +  +  ++T L    +P G  + +    V+ D ELWGD   EF+PERF   +  + K    +V+   F LG R C+G+
Sbjct:  241 IPVLRYLPNSSLDAFKDLNDKFYSFMKKLIKEHYRTFEKGHI--RDITDSLIEHCQDRKLDE---NANVQLSDDKVITIVLDLFGAGFDTVTTAISWSLMYLVTNPRVQRKIQEELDTVIGRDRQPRLSDRPQLPYLEAFILETFRHSSFVPFT-IPHSTTRDTSLNGFYIPKGCCVFVNQWQVNHDRELWGDPN-EFRPERFLTPSGTLDKRLSEKVTL--FGLGKRKCIGE 464          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP139_MYCTU (Putative cytochrome P450 139 OS=Mycobacterium tuberculosis GN=cyp139 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11
Identity = 62/236 (26.27%), Postives = 100/236 (42.37%), Query Frame = 3
Query:    9 MQVFRSVHIPGWRFLPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF---AEGISKAAKNQVSYFPFALGPRICVG 707
            M++ + V+ PGWR     R R    ID +I  +            +     ++ +L  L+     E            S N++ +       AG ETTS  L W +  L       E A  EV +V G   P  D L+ L  +  +++E LRLY P  + +R VL++       + AG  +     + H+ PE+W  +  EF+P R+   A    K A ++  + PF+ G   C+G
Sbjct:  162 MRLQQRVNSPGWRRAMAARKRIDDLIDAQIADA------------RTAPRPDDHMLTTLISGCSEE--------GTTLSDNEIRDSIVSLITAGYETTSGALAWAIYALLTVPGTWESAASEVARVLGGRVPAADDLSALTYLNGVVHETLRLYSPGVISARRVLRDLWFDGHRIRAGRLLIFSAYVTHRLPEIW-PEPTEFRPLRWDPNAADYRKPAPHE--FIPFSGGLHRCIG 374          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP139_MYCBO (Putative cytochrome P450 139 OS=Mycobacterium bovis GN=cyp139 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11
Identity = 62/236 (26.27%), Postives = 100/236 (42.37%), Query Frame = 3
Query:    9 MQVFRSVHIPGWRFLPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF---AEGISKAAKNQVSYFPFALGPRICVG 707
            M++ + V+ PGWR     R R    ID +I  +            +     ++ +L  L+     E            S N++ +       AG ETTS  L W +  L       E A  EV +V G   P  D L+ L  +  +++E LRLY P  + +R VL++       + AG  +     + H+ PE+W  +  EF+P R+   A    K A ++  + PF+ G   C+G
Sbjct:  162 MRLQQRVNSPGWRRAMAARKRIDDLIDAQIADA------------RTAPRPDDHMLTTLISGCSEE--------GTTLSDNEIRDSIVSLITAGYETTSGALAWAIYALLTVPGTWESAASEVARVLGGRVPAADDLSALTYLNGVVHETLRLYSPGVISARRVLRDLWFDGHRIRAGRLLIFSAYVTHRLPEIW-PEPTEFRPLRWDPNAADYRKPAPHE--FIPFSGGLHRCIG 374          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP11A_DASAM (Cholesterol side-chain cleavage enzyme, mitochondrial (Fragment) OS=Dasyatis americana GN=CYP11A1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11
Identity = 41/148 (27.70%), Postives = 78/148 (52.70%), Query Frame = 3
Query:  294 ETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQM---ILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSR 728
            +TTS  ++W M  L+KH   Q+  R E+++   + K + D +  LK V +   ++ E LRLYP    + R + ++T L N  +PAG  + L +  + ++P+++  +  ++ PER+ +G          +  F  GPR C+G+    ++
Sbjct:  330 DTTSTTVHWMMYELAKHPHIQKNVRSEIMEA--HQKTEGDPVKMLKSVPLLKCVVKETLRLYPVAISIQRYLNEDTVLQNYHIPAGTLVQLGLYAMGRNPKIF-KNPEQYNPERWLKG----EDTHFRHLGFGFGPRQCIGRRIAETQ 470          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CCD1P_DROME (Probable cytochrome P450 12d1 proximal, mitochondrial OS=Drosophila melanogaster GN=Cyp12d1-p PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11
Identity = 61/234 (26.07%), Postives = 107/234 (45.73%), Query Frame = 3
Query:   42 WRFLPTKRNRRMKE-IDKEIRASLMGIIKNR---EKAMKAGEAAN-NDLLGILMETSFREIEEHGNNKNVGFSMN-DVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP--DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVS---YFPFALGPRICVGQ 710
            W+ + T   R+MK  ++  +  +   + +N+   EK  +AGE  N N +L  LME           +  V   M+ D++       FAG + T+ LL+  ++ LSKH D Q + R+E+L +        + + +  +  ++ ++ E LR YP      R    +  L    +P G  + L   ++ ++   +     EF PER+        K QVS   + PF  GPR+C+G+
Sbjct:  255 WKIISTPTYRKMKRTLNDSLNVAQKMLKENQDALEKRRQAGEKINSNSMLERLMEI----------DPKVAVIMSLDIL-------FAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGLGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYY-PRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGK 470          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11
Identity = 46/188 (24.47%), Postives = 91/188 (48.40%), Query Frame = 3
Query:  162 NNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-----PDYDGLNHLKIVQMILYEVLRLYPPV-TMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVG 707
            ++D++G++++   +E  + G+ K     +  V+ +    + AG    ++ + W +  L++H    ++ +QE+ ++ G+NK      D + +++LK+V   + E  RL+PP   +L R  + + K+    +P    I +    + +DP  W  +  EF PERF +             PF  G RIC G
Sbjct:  264 HSDIVGVMLDMINKE-SKVGSFKVTYDHLKGVMSDV---FLAGVNAGAITMIWALTELTRHPRVMKKLQQEIRELLGDNKEKITEQDLEKVHYLKLV---IQETFRLHPPAPLLLPRETMSDVKIQGYNIPKNTMIEINTYAIGRDPNCW-TNPNEFIPERFVDSPIDYKGQHFELLPFGGGRRICPG 443          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11
Identity = 46/218 (21.10%), Postives = 106/218 (48.62%), Query Frame = 3
Query:   63 RNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDY--DGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVG 707
            +++R+ ++  ++ A L  +I +     ++ +  + D++ ++++   ++    G + ++  +++ +         AG +T ++ + WTM  L+++ +  ++ + E+    GNN+     + L+ +  + +++ E  RL+P   +L  R  +   K+    +P   +I +    + +DP+LW D   EFKPERF +             PF  G RIC G
Sbjct:  236 QHKRLNDVFLKLDALLQHVIDDHSNPGRSKD--HKDIVDVMLDVMHKQ----GKDDSLRLTIDHIKGLLTNIIIAGIDTGALTMIWTMTELARNPEIMKKVQGEIRDRLGNNRERITKEDLDKVPFLNLVIKETFRLHPVAPLLLPRETMAHVKVQGYDIPPKRRILVNAWAIGRDPKLWTDPE-EFKPERFIDSPVDYRGQHFELLPFGSGRRICPG 446          
The following BLAST results are available for this feature:
BLAST of CN188375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
CP52D_CANMA1.991e-1128.93Cytochrome P450 52A4 OS=Candida maltosa GN=CYP52A4... [more]
CP51_UNCNE1.991e-1123.62Eburicol 14-alpha-demethylase OS=Uncinula necator ... [more]
CP2J1_RABIT1.991e-1122.90Cytochrome P450 2J1 OS=Oryctolagus cuniculus GN=CY... [more]
CP1A1_MOUSE1.991e-1125.75Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1... [more]
CP139_MYCTU1.991e-1126.27Putative cytochrome P450 139 OS=Mycobacterium tube... [more]
CP139_MYCBO1.991e-1126.27Putative cytochrome P450 139 OS=Mycobacterium bovi... [more]
CP11A_DASAM1.991e-1127.70Cholesterol side-chain cleavage enzyme, mitochondr... [more]
CCD1P_DROME1.991e-1126.07Probable cytochrome P450 12d1 proximal, mitochondr... [more]
C71BL_ARATH1.991e-1124.47Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH1.991e-1121.10Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188375 ID=CN188375; Name=CN188375; organism=Citrus sinensis; type=EST; length=769bp
GAGGCACAATGCAAGTCTTTCGTTCAGTTCACATTCCAGGATGGAGGTTT
TTACCTACAAAGAGAAATAGGAGAATGAAAGAAATTGACAAGGAAATCCG
GGCTTCATTGATGGGAATCATCAAAAATAGGGAGAAGGCAATGAAAGCAG
GGGAAGCTGCGAATAATGACTTGTTAGGCATACTGATGGAAACCAGTTTT
AGAGAGATTGAAGAACATGGAAATAACAAAAATGTTGGGTTCAGCATGAA
CGATGTGATCGAAGAGTGTAAGCTATTTTACTTTGCCGGCCAAGAGACTA
CCTCTGTTTTGCTTAATTGGACGATGGTCTTATTGAGCAAGCATCAAGAT
TGGCAAGAACGTGCAAGGCAAGAGGTTTTGCAAGTGTTTGGCAATAATAA
GCCCGACTATGATGGATTGAATCACCTCAAAATTGTCCAGATGATACTTT
ATGAGGTACTCAGGCTTTATCCGCCCGTAACTATGCTTAGTCGAGCTGTT
CTTAAGGAAACGAAACTCGGAAACTTGACATTACCCGCTGGGGTTCAAAT
TGGCTTGCCAATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACG
ATGCAGTTGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCG
GCGAAAAATCAAGTTTCATATTTCCCATTCGCATTGGGTCCTAGGATATG
TGTTGGACAAAATTTTTGCTCTAGTAGAAGCAAAAATGGCCACGACAATG
ATTCTTCAAAACTACTCAT
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