CN188375

Overview
NameCN188375
Unique NameCN188375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: YL532_MIMIV (Cytochrome P450-like protein L532 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L532 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11
Identity = 44/155 (28.39%), Postives = 76/155 (49.03%), Query Frame = 3
Query:  252 DVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            ++IE        G ETT+ L+   +  +  +++  E+   E  +     K DY  L     +  I+ E  RL+PPV +LSR    +T + N     G Q  +  +++ +D  +WG +A +F PERF+    K+  +++ Y PF +G   C G+ F
Sbjct:  270 ELIEFILSVVLGGHETTARLMLGIIYSVCHNKEIIEKLNNETDEY---PKGDYINLKKRPYLNNIIKEGTRLFPPVWLLSREAKNDTTIDNHFFKKGTQFLISPLIILRDYNVWGSNAEKFDPERFSNMDPKSKASKL-YIPFIVGSEDCPGKKF 420          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: T5H_TAXCU (Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11
Identity = 54/235 (22.98%), Postives = 108/235 (45.96%), Query Frame = 3
Query:   27 VHIPGWRFLPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEA-ANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD----YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            + +PG+ F    + R       ++   ++ +IK R++ +++G A A  DLL +L+  +FR+      +K    + +++++       A  +TT+  +     LLS + +  ++  QE L++  N +      +  L  +K    +  E LR++PPV    R  + + +    T+P G ++       H   +L+ ++  +F P RF +     A    ++ PF  G R CVG  F
Sbjct:  233 IDLPGFGFHRALQGRA------KLNKIMLSLIKKRKEDLQSGSATATQDLLSVLL--TFRD------DKGTPLTNDEILDNFSSLLHASYDTTTSPMALIFKLLSSNPECYQKVVQEQLEILSNKEEGEEITWKDLKAMKYTWQVAQETLRMFPPVFGTFRKAITDIQYDGYTIPKGWKLLWTTYSTH-PKDLYFNEPEKFMPSRFDQEGKHVA--PYTFLPFGGGQRSCVGWEF 450          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP2D3_RAT (Cytochrome P450 2D3 OS=Rattus norvegicus GN=Cyp2d3 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11
Identity = 46/178 (25.84%), Postives = 83/178 (46.63%), Query Frame = 3
Query:  183 LMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGN-NKPDYDGLNHLKIVQMILYEVLRLYPPVTM-LSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQ 710
            L +    EIE+   N    F+  ++       + AG  TTS+ L W ++L+  H D Q R +QE+ +V G    P+     H+     +++EV R    V M L     ++ ++    +P G  +   +  V +D  +W +  + F PE F +      K++ ++ PF+ G R C+G+
Sbjct:  274 LTDAFLAEIEKAKGNPESSFNDANLRLVVNDLFGAGMVTTSITLTWALLLMILHPDVQCRVQQEIDEVIGQVRHPEMADQAHMPFTNAVIHEVQRFADIVPMNLPHKTSRDIEVQGFLIPKGTTLIPNLSSVLKDETVW-EKPLRFHPEHFLDAQGNFVKHE-AFMPFSAGRRACLGE 449          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP2CB_RAT (Cytochrome P450 2C11 OS=Rattus norvegicus GN=Cyp2c11 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11
Identity = 48/196 (24.49%), Postives = 92/196 (46.94%), Query Frame = 3
Query:  132 EKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPV-TMLSRAVLKETKLGNLTLPAGVQIGLPM-ILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQ 710
            EK  +  E+ + D     ++    ++E+  +N    F++  ++      + AG ETTS  L + ++LL KH D   + ++E+ +V G N+ P     + +     +++E+ R    V T L   V ++ K  N  +P G  + + +  ++H D E    +  +F P  F +      K+   + PF+ G RIC G+
Sbjct:  246 EKVKEHQESLDKDNPRDFIDCFLNKMEQEKHNPQSEFTLESLVATVTDMFGAGTETTSTTLRYGLLLLLKHVDVTAKVQEEIERVIGRNRSPCMKDRSQMPYTDAVVHEIQRYIDLVPTNLPHLVTRDIKFRNYFIPKGTNVIVSLSSILHDDKEF--PNPEKFDPGHFLDERGNFKKSDY-FMPFSAGKRICAGE 438          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP2C9_HUMAN (Cytochrome P450 2C9 OS=Homo sapiens GN=CYP2C9 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11
Identity = 53/225 (23.56%), Postives = 107/225 (47.56%), Query Frame = 3
Query:   48 FLPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLR---LYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQ 710
            + P   N+ +K +   +++ ++  +K  +++M      +       ++    ++E+  +N+   F++  +       + AG ETTS  L + ++LL KH +   + ++E+ +V G N+ P     +H+     +++EV R   L P  T L  AV  + K  N  +P G  I + +  V  D + + +  + F P  F +      K++  + PF+ G RICVG+
Sbjct:  225 YFPGTHNKLLKNV-AFMKSYILEKVKEHQESMDMNNPQD------FIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLP--TSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEM-FDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGE 438          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP27A_HUMAN (Sterol 26-hydroxylase, mitochondrial OS=Homo sapiens GN=CYP27A1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11
Identity = 44/146 (30.14%), Postives = 68/146 (46.58%), Query Frame = 3
Query:  285 AGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVF-GNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAA---KNQVSYFPFALGPRICVGQ 710
            AG +TTS  L W +  LSK  + QE   +EV+ V      P +    H+ +++ +L E LRLYP V   SR + KE ++     P   Q      +V +DP  + +    F+P R+      A    ++     PF  G R C+G+
Sbjct:  335 AGVDTTSNTLTWALYHLSKDPEIQEALHEEVVGVVPAGQVPQHKDFAHMPLLKAVLKETLRLYPVVPTNSRIIEKEIEVDGFLFPKNTQFVFCHYVVSRDPTAFSEPE-SFQPHRWLRNSQPATPRIQHPFGSVPFGYGVRACLGR 479          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP17A_MACMU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca mulatta GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11
Identity = 55/235 (23.40%), Postives = 103/235 (43.83%), Query Frame = 3
Query:   36 PGWRFLPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVG-------FSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGI-SKAAKNQVSYFPFALGPRICVGQ 710
            P  +  P K   ++K   K     L  I +N ++   +    N  +L +LM+        + +N N G        S N ++      + AG ETT+ ++ W +  L  +   +++  +E+ Q  G ++ P     N L +++  + EVLR+ P   ML       ++ +G   +  G  + + +  +H + + W     +F PERF     ++     +SY PF  GPR C+G+
Sbjct:  219 PWLKVFPNKTLEKLKRHVKTRNDLLTKIFENYKEKFHSDSITN--MLDVLMQAKM-----NSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPD-QFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGE 445          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP17A_MACFA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca fascicularis GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11
Identity = 55/235 (23.40%), Postives = 103/235 (43.83%), Query Frame = 3
Query:   36 PGWRFLPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVG-------FSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGI-SKAAKNQVSYFPFALGPRICVGQ 710
            P  +  P K   ++K   K     L  I +N ++   +    N  +L +LM+        + +N N G        S N ++      + AG ETT+ ++ W +  L  +   +++  +E+ Q  G ++ P     N L +++  + EVLR+ P   ML       ++ +G   +  G  + + +  +H + + W     +F PERF     ++     +SY PF  GPR C+G+
Sbjct:  219 PWLKVFPNKTLEKLKRHVKTRNDLLTKIFENYKEKFHSDSITN--MLDVLMQAKM-----NSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPD-QFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGE 445          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11
Identity = 66/241 (27.39%), Postives = 103/241 (42.74%), Query Frame = 3
Query:   24 SVHIPGWRFL--PTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG-NNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL---GNLTLPAGVQIGLPMILVHQDPELWGD-DAVEFKPERF--AEGISKAAKNQVS--YFPFALGPRICVGQN 713
            S H+P    L  P+   RR   +   ++  + G+I    +  +   A N++   + +  S    E+ G++  V      V        F G +TT++L  W M  L +H   Q R R EV    G    P    +  +  +Q ++ E LR +PP  +LS A L    +     + +PAG    + M  +  D  +W D DA  F PERF  +EG +      V     PF  G R+C G+N
Sbjct:  264 SDHLPWLAHLYDPSNVTRRCAALVPRVQTFVRGVIDEHRRRRQNSAALNDNADFVDVLLSLEGDEKLGDDDMVAILWEMV--------FRGTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPLLSWARLATADVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDA--FAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKN 494          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11
Identity = 52/205 (25.37%), Postives = 92/205 (44.88%), Query Frame = 3
Query:   96 IRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVG 707
            I A L       EK  K  EA++ D+L  L++ + +   E         +MND+       + AG +T S  + W M  L +  +   +A+ E+ QV G N       +  L  +Q I+ E LRL+P   ++ R    + ++    +P   Q+ + +  + +D  +W ++ ++F+PERF    +          PF  G R+C G
Sbjct:  260 IDARLAKRFSRTEKEPK--EASSIDMLDSLLDLTQQNEAE--------LTMNDLKHLLLDVFVAGTDTNSSTMEWAMTELFRSTEKMVKAQSEIRQVIGQNGFVQESDIPSLPYLQAIVKETLRLHPAAPLIPRKSESDVQIMGFLVPKNTQVVVNVWAIGRDASVW-ENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPG 453          
The following BLAST results are available for this feature:
BLAST of CN188375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
YL532_MIMIV5.794e-1128.39Cytochrome P450-like protein L532 OS=Acanthamoeba ... [more]
T5H_TAXCU5.794e-1122.98Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata P... [more]
CP2D3_RAT5.794e-1125.84Cytochrome P450 2D3 OS=Rattus norvegicus GN=Cyp2d3... [more]
CP2CB_RAT5.794e-1124.49Cytochrome P450 2C11 OS=Rattus norvegicus GN=Cyp2c... [more]
CP2C9_HUMAN5.794e-1123.56Cytochrome P450 2C9 OS=Homo sapiens GN=CYP2C9 PE=1... [more]
CP27A_HUMAN5.794e-1130.14Sterol 26-hydroxylase, mitochondrial OS=Homo sapie... [more]
CP17A_MACMU5.794e-1123.40Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
CP17A_MACFA5.794e-1123.40Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
C78A1_MAIZE5.794e-1127.39Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C76C3_ARATH5.794e-1125.37Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188375 ID=CN188375; Name=CN188375; organism=Citrus sinensis; type=EST; length=769bp
GAGGCACAATGCAAGTCTTTCGTTCAGTTCACATTCCAGGATGGAGGTTT
TTACCTACAAAGAGAAATAGGAGAATGAAAGAAATTGACAAGGAAATCCG
GGCTTCATTGATGGGAATCATCAAAAATAGGGAGAAGGCAATGAAAGCAG
GGGAAGCTGCGAATAATGACTTGTTAGGCATACTGATGGAAACCAGTTTT
AGAGAGATTGAAGAACATGGAAATAACAAAAATGTTGGGTTCAGCATGAA
CGATGTGATCGAAGAGTGTAAGCTATTTTACTTTGCCGGCCAAGAGACTA
CCTCTGTTTTGCTTAATTGGACGATGGTCTTATTGAGCAAGCATCAAGAT
TGGCAAGAACGTGCAAGGCAAGAGGTTTTGCAAGTGTTTGGCAATAATAA
GCCCGACTATGATGGATTGAATCACCTCAAAATTGTCCAGATGATACTTT
ATGAGGTACTCAGGCTTTATCCGCCCGTAACTATGCTTAGTCGAGCTGTT
CTTAAGGAAACGAAACTCGGAAACTTGACATTACCCGCTGGGGTTCAAAT
TGGCTTGCCAATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACG
ATGCAGTTGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCG
GCGAAAAATCAAGTTTCATATTTCCCATTCGCATTGGGTCCTAGGATATG
TGTTGGACAAAATTTTTGCTCTAGTAGAAGCAAAAATGGCCACGACAATG
ATTCTTCAAAACTACTCAT
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