CN188375

Overview
NameCN188375
Unique NameCN188375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11
Identity = 49/220 (22.27%), Postives = 103/220 (46.82%), Query Frame = 3
Query:   63 RNRRMKEIDKEIRASLMGIIKNREKAMKAGE--AANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDY--DGLNHLKIVQMILYEVLRLYPPVT-MLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVG 707
            +N+R   +  ++      I+   +  +K G   A ++D++ +++    ++ ++  + K     +  +I +    + AG  T++  L W +  L +++   ++ ++E+    G+ K       L +L   ++++ E+ RL+P V  +L R  L   K+    +PA  QI + +  + +DP+LW  +  EF P+RF +             PF  G RIC G
Sbjct:  230 QNKRFDNVFSDLDTFFQNIL---DYHLKPGRKVADSSDIIDVVINMIKKQEKDGDSFKLTTDHLKGMISD---IFLAGVSTSASTLIWAITELVRNRKVMKKVQEEIRTTLGDKKERITEQDLTNLHYFKLVVKEIFRLHPAVPFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLW-TNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPG 442          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11
Identity = 53/219 (24.20%), Postives = 104/219 (47.49%), Query Frame = 3
Query:   51 LPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRIC 701
            L + R +  +++D   + +   I+ +REK          DL+ +L++   +E +  G+++     +  +I +    + AG +T+ + L+WTM  LS+H    ++ + E+ +  G+     YD L  L  ++M++ E  RL+ P  +L  R  +   K+    +  G +I +    + ++P++W  D  EF PERF +   +         PF  G R C
Sbjct:  239 LDSSRRKSFQDLDTFYQKA---IVDHREKKKTEDR---EDLIDVLLKLQSQETKL-GSSRITDTHIRAIIMD---LFVAGVDTSVITLDWTMAELSRHPRVMKKVQAEIREHVGDKGIVTYDDLEALVYMKMVIKETWRLHAPSPILIPREAMTNFKIKGYDIYPGTRIHVNAWAIGRNPDVW-KDPDEFIPERFVDSNVETKGTSFELLPFGSGRRGC 446          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C524A_DICDI (Probable cytochrome P450 524A1 OS=Dictyostelium discoideum GN=cyp524a1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11
Identity = 59/210 (28.10%), Postives = 95/210 (45.24%), Query Frame = 3
Query:  117 IIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNN-KPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLG-NLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISK----AAKNQVSYFPFALGPRICVGQNFCSSR 728
            II    K M  GE   + L+ + +E      EE  +      S + +I     F FA Q+  +  L WT+ L+++H D   + R E   +  NN K D D +      +M++ E+LR  PP  M+    +++  +G N+ +P G  I LP I      E    D  +F P+RF + + K     AKN +    F  GP  C+G+    ++
Sbjct:  288 IIAKSRKRMGDGEKPQS-LIDLWVEHFLNCPEEERDE----LSNDTIIFTLLSFMFASQDALTSSLVWTVQLMAEHPDILAKVRAEQASLRPNNEKLDLDTMRQATYTRMVVSEILRFRPPAVMVPHENIEDIVIGDNVHVPKGTMI-LPSIWSAHFQEGGYSDPYKFDPQRF-DSVRKEDVTCAKNSL---VFGAGPHFCIGKELAKNQ 487          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C518A_DICDI (Probable cytochrome P450 518A1 OS=Dictyostelium discoideum GN=cyp518a1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11
Identity = 45/149 (30.20%), Postives = 71/149 (47.65%), Query Frame = 3
Query:  285 AGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP--DYDGLNHLKIVQMILYEVLRLYPPVTM-LSRAVLKETKL--GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            AG ET S    W ++ +  + D+Q++   E+                N   +    L EVLRLYPPV   + R V +  ++  G+L +P G QI   +  + +D   W D   +FKPERF +  S +     +YFP+ +G + C+G  F
Sbjct:  300 AGTETNSSTAEWFILTMVNNLDYQDKIYNELKSTLETTTAMIKLSNRNQTPLFNAALKEVLRLYPPVPFGVPRQVNQSFEINGGSLKIPKGTQIIQSLYSIFRDENYW-DSPDQFKPERFLDQDSHSN----NYFPYGIGVKNCIGMGF 443          
The following BLAST results are available for this feature:
BLAST of CN188375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
C71BT_ARATH9.883e-1122.27Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH9.883e-1124.20Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C524A_DICDI9.883e-1128.10Probable cytochrome P450 524A1 OS=Dictyostelium di... [more]
C518A_DICDI9.883e-1130.20Probable cytochrome P450 518A1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188375 ID=CN188375; Name=CN188375; organism=Citrus sinensis; type=EST; length=769bp
GAGGCACAATGCAAGTCTTTCGTTCAGTTCACATTCCAGGATGGAGGTTT
TTACCTACAAAGAGAAATAGGAGAATGAAAGAAATTGACAAGGAAATCCG
GGCTTCATTGATGGGAATCATCAAAAATAGGGAGAAGGCAATGAAAGCAG
GGGAAGCTGCGAATAATGACTTGTTAGGCATACTGATGGAAACCAGTTTT
AGAGAGATTGAAGAACATGGAAATAACAAAAATGTTGGGTTCAGCATGAA
CGATGTGATCGAAGAGTGTAAGCTATTTTACTTTGCCGGCCAAGAGACTA
CCTCTGTTTTGCTTAATTGGACGATGGTCTTATTGAGCAAGCATCAAGAT
TGGCAAGAACGTGCAAGGCAAGAGGTTTTGCAAGTGTTTGGCAATAATAA
GCCCGACTATGATGGATTGAATCACCTCAAAATTGTCCAGATGATACTTT
ATGAGGTACTCAGGCTTTATCCGCCCGTAACTATGCTTAGTCGAGCTGTT
CTTAAGGAAACGAAACTCGGAAACTTGACATTACCCGCTGGGGTTCAAAT
TGGCTTGCCAATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACG
ATGCAGTTGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCG
GCGAAAAATCAAGTTTCATATTTCCCATTCGCATTGGGTCCTAGGATATG
TGTTGGACAAAATTTTTGCTCTAGTAGAAGCAAAAATGGCCACGACAATG
ATTCTTCAAAACTACTCAT
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