CN188375

Overview
NameCN188375
Unique NameCN188375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP311_DROME (Probable cytochrome P450 311a1 OS=Drosophila melanogaster GN=Cyp311a1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.065e-20
Identity = 68/228 (29.82%), Postives = 111/228 (48.68%), Query Frame = 3
Query:   42 WRFLPTKRNRRMKEIDKEIRASLMGIIKNREKAM-KAGEAAN--NDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            W F  T+  R + E  + I + +  +I+ R K +   GE A   ++LL  L+   F         +    S  ++ +E   F FAG +TT+  +++ +  L+K  + Q R R+E+  V  +   D D LN L  ++ ++ EVLRLY  V    R   + T++G  T  AGV + + M  +  D E +  D   FKPER+       A    SY PF+ GP +C+G+ +
Sbjct:  218 WIFQRTQLWRDLDEQLQVIHSQMESVIEKRAKELLDMGEPAGRAHNLLDTLLLAKF---------EGQSLSRREIRDEINTFVFAGVDTTTAAMSFVLYALAKFPETQTRLRKELQDVALDETTDLDALNGLPYLEALIKEVLRLYTIVPTTGRQTTQSTEIGGRTYCAGVTLWINMYGLAHDKEYY-PDPYAFKPERWLPEDGAVAPPAFSYIPFSGGPHVCIGRRY 435          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4FB_HUMAN (Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.003e-20
Identity = 56/168 (33.33%), Postives = 95/168 (56.55%), Query Frame = 3
Query:  243 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            S  D+  E   F F G +TT+  L+W +  L+KH ++QE+ RQEV ++  + +P   ++D L  L  + M + E LRL+PPV ++SR   ++  L     +P G+   + +I +H +P +W D  V + P RF +   K  ++ +++ PF+ GPR C+GQ F  +  K
Sbjct:  314 SDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEYQEQCRQEVQELLKDREPIEIEWDDLAQLPFLTMCIKESLRLHPPVPVISRCCTQDFVLPDGRVIPKGIVCLINIIGIHYNPTVWPDPEV-YDPFRFNQENIK-ERSPLAFIPFSAGPRNCIGQAFAMAEMK 479          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3AF_CAVPO (Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.003e-20
Identity = 56/198 (28.28%), Postives = 107/198 (54.04%), Query Frame = 3
Query:  123 KNREKAMKAGEAANNDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQ 710
            K +E  +++ +    + L +++ + +F++ E H    +V     +++ +  +F FAG ET+S  L+  M  L+ H D Q++  QE+ +   N   P YD +  ++ + M++ E LRLYP    + R   K+ ++  ++ P G  + +P   +H+D + W  +  EF+PERF++  +K   +   Y PF  GPR C+G+
Sbjct:  255 KTKENHLESNKKQRVNFLQMMLNSQNFKDTESHKALSDV-----EILAQSIIFIFAGYETSSSTLSCIMYSLATHPDVQKKLHQEIDKTLPNKAFPTYDVMMEMEYLDMVVNETLRLYPVANRIERMSKKDFEINGMSFPKGTLVMIPSFALHRDSKYW-PEPDEFRPERFSKK-NKENIDPYIYMPFGNGPRNCIGR 445          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C6A13_DROME (Probable cytochrome P450 6a13 OS=Drosophila melanogaster GN=Cyp6a13 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.003e-20
Identity = 71/251 (28.29%), Postives = 118/251 (47.01%), Query Frame = 3
Query:    6 TMQVFRSVHIPGWRFLPTK--RNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVF--GNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL--GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSKNG 740
            T +   SV +  + F   +  R  R +    E+    +  ++      +      NDL+ +LME     +++         S   +  +  +F+ AG +T+S  +++ +  L+ + D QER R EVL V    N K  YD +  +  +  ++ E LR YP +  L R   KE ++   NL L  G +I +P+  +H DPEL+  D  +F P RF E     A++  +Y PF  GPR C+G+ F   + K G
Sbjct:  207 TQEPLHSVLVQAFMFAQPELARKLRFRLFRPEVSEFFLDTVRQTLDYRRRENIHRNDLIQLLMELGEEGVKD-------ALSFEQIAAQALVFFLAGFDTSSTTMSFCLYELALNPDVQERLRVEVLAVLKRNNQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLRRSTKEYQIPNSNLILEPGSKIIIPVHSIHHDPELY-PDPEKFDPSRF-EPEEIKARHPFAYLPFGEGPRNCIGERFGKLQVKVG 448          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4V3_RAT (Cytochrome P450 4V3 OS=Rattus norvegicus GN=Cyp4v3 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.228e-20
Identity = 70/255 (27.45%), Postives = 124/255 (48.63%), Query Frame = 3
Query:   15 VFRSVHIPGWRF----LPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGE----AANNDLLGILMETSFREI-----EEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG-NNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            ++R + +P + F    L  K  R  K+  K +      +I  R  A KA +    A    L       +F ++     +E GN      S  D+ EE   F F G +TT+  +NW++ LL  + + Q +  +E+  VFG +++P   + L  LK +  ++ E LR++P V + +R++ ++ ++    +  G +  +    +H+DP  +  D  EF+PERF    S+  ++  +Y PF+ GPR C+GQ F     K
Sbjct:  230 IYRRMKMPWFWFDLWYLMFKEGRDHKKGLKSLHTFTNNVIAERVNARKAEQDCIGAGRGPLPSKTKRKAFLDLLLSVTDEEGNK----LSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQRKVDKELDDVFGRSHRPVTLEDLKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEVAGYKISKGTEAVIIPYALHRDPRYF-PDPEEFQPERFFPENSQ-GRHPYAYVPFSAGPRNCIGQKFAVMEEK 478          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4F4_RAT (Cytochrome P450 4F4 OS=Rattus norvegicus GN=Cyp4f4 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.228e-20
Identity = 66/244 (27.05%), Postives = 115/244 (47.13%), Query Frame = 3
Query:   57 TKRNRRMKEIDKEIRASLMGIIKNREKAMKA----------GEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGD----DAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            T   RR  +  K +      +I+ R +A+ +            +   D + +L+ T   + +E         S  D+  E   F F G +TT+  L+W +  L++H ++QER RQEV ++  + +    ++D L  L  + M + E LRL+PPVT++SR   ++  L     +P GV   + +   H +P +W D    D   F PE   +      ++ +++ PF+ GPR C+GQ F  +  K
Sbjct:  250 THNGRRFHKACKLVHNFTDAVIQGRRRALPSQHEDDILKAKARSKTLDFIDVLLLTKDEDGKE--------LSDEDIRAEADTFMFEGHDTTASGLSWILYNLARHPEYQERCRQEVRELLRDRESTEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRRCTQDIVLPDGRVIPKGVICIINIFATHHNPTVWPDPEVYDPFRFDPENIKD------RSPLAFIPFSAGPRNCIGQTFAMNEMK 479          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4F1_RAT (Cytochrome P450 4F1 OS=Rattus norvegicus GN=Cyp4f1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.228e-20
Identity = 58/169 (34.32%), Postives = 93/169 (55.03%), Query Frame = 3
Query:  243 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF-AEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            S  D+  E   F F G +TT+  L+W +  L+   ++QER RQEV ++  +  P   ++D L  L  + M + E LRL+PPVT++SR   ++  L    T+P G+   + +  +H +P +W D  V + P RF  E I  +  + +++ PF+ GPR C+GQ F  S  K
Sbjct:  314 SDEDIRAEADTFMFEGHDTTASGLSWILYNLANDPEYQERCRQEVQELLRDRDPEEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVWPDPEV-YNPFRFDPENIKDS--SPLAFIPFSAGPRNCIGQTFAMSEMK 479          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4C1_BLADI (Cytochrome P450 4C1 OS=Blaberus discoidalis GN=CYP4C1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.228e-20
Identity = 58/198 (29.29%), Postives = 100/198 (50.51%), Query Frame = 3
Query:  165 NDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVF--GNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQ------DPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            ++LLG     +F ++    +      S  D+ EE   F F G +TTS  + W + LL  H + Q++  +E+  +F   +       L  +K ++ ++ E LRL+P V  + R + ++TK+G+  +PAG  + L +  VH+      +PE +  D   F PER A+      ++  +Y PF+ GPR C+GQ F +   K
Sbjct:  274 DELLGKKKRLAFLDLLLEASENGTKMSDTDIREEVDTFMFEGHDTTSAGICWALFLLGSHPEIQDKVYEELDHIFQGSDRSTTMRDLADMKYLERVIKESLRLFPSVPFIGRVLKEDTKIGDYLVPAGCMMNLQIYHVHRNQDQYPNPEAFNPD--NFLPERVAK------RHPYAYVPFSAGPRNCIGQKFATLEEK 463          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP343_HUMAN (Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.549e-20
Identity = 54/184 (29.35%), Postives = 101/184 (54.89%), Query Frame = 3
Query:  198 FREIEEHGNNKNV----GFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            F+++ +  N+K        S  +++ +  +  FA  +TTS  L + M  L+ H D Q++ ++E+  V  N  P  YD L  ++ + M++ E LRL+P V+ ++R   K+ ++  + +P G+ + +P+  +H DP+ W  +  +F PERF++  +K + +   Y PF  GPR C+G  F  +  K
Sbjct:  272 FQQMIDSQNSKETKSHKALSDLELVAQSIIIIFAAYDTTSTTLPFIMYELATHPDVQQKLQEEIDAVLPNKAPVTYDALVQMEYLDMVVNETLRLFPVVSRVTRVCKKDIEINGVFIPKGLAVMVPIYALHHDPKYW-TEPEKFCPERFSKK-NKDSIDLYRYIPFGAGPRNCIGMRFALTNIK 453          

HSP 2 Score: 21.1718 bits (43), Expect = 6.549e-20
Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FAL   K+A    LQN+S
Sbjct:  447 FALTNIKLAVIRALQNFS 464          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C6A17_DROME (Probable cytochrome P450 6a17 OS=Drosophila melanogaster GN=Cyp6a17 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.828e-20
Identity = 57/190 (30.00%), Postives = 109/190 (57.37%), Query Frame = 3
Query:  165 NDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG--NNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLG----NLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            ND +  L+E    + E+ GN+++ G + N+++ +  +F+ AG ET+S  + + +  L+++QD Q++ R+E+  VFG  N +  Y+G+  +K ++ ++ E LR YP +  L+R  + +T          +  G  + +P + +H DP+++ +  + FKPERF +    AA+   ++ PF  GPR C+G  F
Sbjct:  267 NDFMDSLIE--MYKNEQSGNSED-GLTFNELLAQAFIFFVAGFETSSTTMGFALYELARNQDVQDKLREEIGNVFGKHNKEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTR--MTDTDFSPEDPKYFIAKGTIVVIPALGIHYDPDIYPEPEI-FKPERFTDE-EIAARPSCTWLPFGEGPRNCIGLRF 449          
The following BLAST results are available for this feature:
BLAST of CN188375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
CP311_DROME3.065e-2029.82Probable cytochrome P450 311a1 OS=Drosophila melan... [more]
CP4FB_HUMAN4.003e-2033.33Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE... [more]
CP3AF_CAVPO4.003e-2028.28Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15... [more]
C6A13_DROME4.003e-2028.29Probable cytochrome P450 6a13 OS=Drosophila melano... [more]
CP4V3_RAT5.228e-2027.45Cytochrome P450 4V3 OS=Rattus norvegicus GN=Cyp4v3... [more]
CP4F4_RAT5.228e-2027.05Cytochrome P450 4F4 OS=Rattus norvegicus GN=Cyp4f4... [more]
CP4F1_RAT5.228e-2034.32Cytochrome P450 4F1 OS=Rattus norvegicus GN=Cyp4f1... [more]
CP4C1_BLADI5.228e-2029.29Cytochrome P450 4C1 OS=Blaberus discoidalis GN=CYP... [more]
CP343_HUMAN6.549e-2029.35Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE... [more]
C6A17_DROME6.828e-2030.00Probable cytochrome P450 6a17 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188375 ID=CN188375; Name=CN188375; organism=Citrus sinensis; type=EST; length=769bp
GAGGCACAATGCAAGTCTTTCGTTCAGTTCACATTCCAGGATGGAGGTTT
TTACCTACAAAGAGAAATAGGAGAATGAAAGAAATTGACAAGGAAATCCG
GGCTTCATTGATGGGAATCATCAAAAATAGGGAGAAGGCAATGAAAGCAG
GGGAAGCTGCGAATAATGACTTGTTAGGCATACTGATGGAAACCAGTTTT
AGAGAGATTGAAGAACATGGAAATAACAAAAATGTTGGGTTCAGCATGAA
CGATGTGATCGAAGAGTGTAAGCTATTTTACTTTGCCGGCCAAGAGACTA
CCTCTGTTTTGCTTAATTGGACGATGGTCTTATTGAGCAAGCATCAAGAT
TGGCAAGAACGTGCAAGGCAAGAGGTTTTGCAAGTGTTTGGCAATAATAA
GCCCGACTATGATGGATTGAATCACCTCAAAATTGTCCAGATGATACTTT
ATGAGGTACTCAGGCTTTATCCGCCCGTAACTATGCTTAGTCGAGCTGTT
CTTAAGGAAACGAAACTCGGAAACTTGACATTACCCGCTGGGGTTCAAAT
TGGCTTGCCAATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACG
ATGCAGTTGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCG
GCGAAAAATCAAGTTTCATATTTCCCATTCGCATTGGGTCCTAGGATATG
TGTTGGACAAAATTTTTGCTCTAGTAGAAGCAAAAATGGCCACGACAATG
ATTCTTCAAAACTACTCAT
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