CN188375

Overview
NameCN188375
Unique NameCN188375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4D2_DROME (Cytochrome P450 4d2 OS=Drosophila melanogaster GN=Cyp4d2 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.918e-20
Identity = 62/226 (27.43%), Postives = 114/226 (50.44%), Query Frame = 3
Query:   78 KEIDKEIRASLMGIIKN---REKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD---YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSKN 737
            + I +E R +L+   K     E+    G+     LL +L++++               S  D+ EE   F F G +TT+  +++ +  +S+H + Q+R +QE+  V G ++        L  LK ++ ++ E LRL+PPV M+ R   ++ ++    +PAG    + + ++ +DPE + +   EF+PERF   + +   +  +Y PF+ GPR C+GQ F     K+
Sbjct:  248 ENIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTI---------DGAPLSDEDIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYF-ESPDEFRPERFDADVPQI--HPYAYIPFSAGPRNCIGQKFAMLEMKS 461          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C13A8_CAEEL (Putative cytochrome P450 CYP13A8 OS=Caenorhabditis elegans GN=cyp-13A8 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.918e-20
Identity = 64/229 (27.95%), Postives = 108/229 (47.16%), Query Frame = 3
Query:   84 IDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGF-----------SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            + K +  ++M  I  RE   K G         I M  + R   EH    N  F           +  ++I +C +F  AG +TT++ L++    L+ +   Q + + EV +   N++  +D L+ LK +  ++ E LRL+P  +   SR  ++ T +G   + AGV + +    +H D  +WG+D  EFKPER+   ++     Q +Y  F  GPR+C+G  F     K
Sbjct:  242 VQKSVTDAVMSRIAQREADKKHGVEPGEAADYIDMFLNARAEVEHFGESNDEFHKSSSYNNRQLTTQEIISQCFVFLVAGFDTTAISLSYVTYFLALNPKIQSKLQDEVDKECPNDEITFDQLSKLKYMDNVIKESLRLFPFASFANSRRCMRNTVIGEQIVEAGVDVMIDTWTLHHDKNVWGNDVEEFKPERWDSPLTP----QQAYLSFGAGPRVCLGMRFALLEQK 466          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4AP_PIG (Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.165e-19
Identity = 56/171 (32.75%), Postives = 93/171 (54.39%), Query Frame = 3
Query:  228 KNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            K    S  D+  E   F F G +TT+  ++W +  L+ H + Q+R R+E+  + G+     +D L+ +    M + E LRLYPPV  +SR + K  T     +LPAG+ + L +  +H +P++W  +  EF P RFA G   +A++  ++ PF+ G R C+G+ F  +  K
Sbjct:  296 KGNSLSDTDLRAEVDTFMFEGHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGIILSLSVYSLHHNPQVW-PNPEEFDPSRFAPG---SARHSHAFMPFSGGSRNCIGKQFAMNEMK 462          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4AO_PIG (Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.165e-19
Identity = 56/171 (32.75%), Postives = 93/171 (54.39%), Query Frame = 3
Query:  228 KNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            K    S  D+  E   F F G +TT+  ++W +  L+ H + Q+R R+E+  + G+     +D L+ +    M + E LRLYPPV  +SR + K  T     +LPAG+ + L +  +H +P++W  +  EF P RFA G   +A++  ++ PF+ G R C+G+ F  +  K
Sbjct:  296 KGNSLSDTDLRAEVDTFMFEGHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGITLSLSIYGLHHNPQVW-PNPEEFDPSRFAPG---SARHSHAFMPFSGGSRNCIGKQFAMNEMK 462          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3AH_CAVPO (Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.165e-19
Identity = 56/197 (28.43%), Postives = 106/197 (53.81%), Query Frame = 3
Query:  123 KNREKAMKAGEAANNDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVG 707
            + +E  +++ E    + L +++++ +F++ E H    +V     +++ +   F  AG ETTS  L + M  L+ H D Q++ +QE+ +   N   P YD +  ++ + M++ E LRLYP    + R   K+ ++  ++ P G  + +P   +H+D + W  +  EF+PERF++  +K   +   Y PF  GPR C+G
Sbjct:  255 RTKENHLESNEKQRVNFLQMMLKSQNFKDTESHKALSDV-----EILAQSIFFIVAGYETTSSTLCFIMYSLATHPDVQKKLQQEIDKTLPNKAFPTYDVMMEMEYLDMVVNETLRLYPVTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYW-PEPDEFRPERFSKK-NKENIDPYIYMPFGNGPRNCIG 444          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.165e-19
Identity = 68/214 (31.78%), Postives = 105/214 (49.07%), Query Frame = 3
Query:   78 KEIDKEIRASLMGIIKNREKAMKAGEAANN--DLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVG 707
            KEI K+        I+ R +  K GE   +  DLL +L++      E  G ++    S +++       + AG ETTS  + W +  L +H     + + E+LQV G NK  +   ++ L  +Q +L E LRL+PP+ +L  R  +++TK     +P G Q+ +    + +DPE W D+  EFKPERF E             PF  G R+CVG
Sbjct:  212 KEITKKF-------IEERIEERKKGEKNRSIKDLLDVLID-----FEGSGKDEPDKLSEDEITVIILEMFLAGTETTSSSVEWALTELLRHPQAMAKVKLEILQVIGPNKKFEECDIDSLPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYW-DNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVG 412          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C6A23_DROME (Probable cytochrome P450 6a23 OS=Drosophila melanogaster GN=Cyp6a23 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.165e-19
Identity = 63/227 (27.75%), Postives = 116/227 (51.10%), Query Frame = 3
Query:   48 FLPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG--NNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE--TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            F    R  R+K   +++      I++N            +D +  L+E    E E+ GN ++ G S N+++ +  +F+ AG ET+S  + + +  L+  QD Q++ R E+  V    NN+  Y+G+  +K ++ ++ E LR YP +  L+R    +   +     +  G  + +P + +H DPE++  +  +FKPERF +  + AA+   ++ PF  GPR C+G  F
Sbjct:  229 FPKLSRRLRLKLNVQDVEDFYTSIVRNTIDYRLRTNEKRHDFMDSLIE--MYEKEQAGNTED-GLSFNEILAQAFIFFVAGFETSSTTMGFALYELALDQDIQDQLRAEINNVLSKHNNEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIPALGIHYDPEIY-PEPEKFKPERFTDE-AIAARPSCTWLPFGEGPRNCIGLRF 450          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP6J1_BLAGE (Cytochrome P450 6j1 OS=Blattella germanica GN=CYP6J1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.521e-19
Identity = 70/224 (31.25%), Postives = 107/224 (47.77%), Query Frame = 3
Query:   72 RMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD--YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLG-NLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            R+K +D EI   +  I+       +      NDLL  LME    E  +           +D + +   F  AG  T+S+ L + +  LS HQD Q  AR E+  V  ++K    Y  +  +K + M++ E LR YP +  L R   ++  L  +L LPAG  + +P+  +H D + +   A +F PERF+E  +K      +Y PF  GPR C+G  F S + K
Sbjct:  242 RLKLMDSEIEDRIRDIVWRAVHLREKTGEKRNDLLDYLMELRTSETSK--------LDGDDFVAQAFGFLVAGFHTSSMTLTFALYELSVHQDIQTTARTEIKDVLEHHKKKVTYYSIKDMKYLDMVVNETLRKYPAIPFLDRRCQEDYPLTQDLMLPAGTGVYIPVYALHHDSKYFPSPA-KFDPERFSEK-NKQNIPHFAYMPFGEGPRNCIGMRFGSMQVK 455          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4CU_BLAGE (Cytochrome P450 4c21 OS=Blattella germanica GN=CYP4C21 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.521e-19
Identity = 56/206 (27.18%), Postives = 97/206 (47.09%), Query Frame = 3
Query:  123 KNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVF--GNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            K   K  K  + + +  +G      F +     +  +   +  D++EE   F F G +T S  + W +  L  H + QE A +EV  +F   +  P    LN++  ++ ++ E LRL+P V    R   ++ +LG  T+PAG  I   +  +H++PE++ +    F P+ F        ++  +Y PF+ GPR C+GQ F     K
Sbjct:  255 KEERKKSKVTQTSEDADIGKKKRVPFLDTLLDASEDDNKLTDTDILEEVHTFMFEGHDTVSAAMTWLLFELGHHPEIQEEAYKEVQDIFQGSDRVPTMADLNNMNYLERVIKESLRLHPSVIYFVREAHQDFELGGYTIPAGTNIDFSVPFIHRNPEIFPNPRC-FNPDNFLPD-RVVNRHPYAYIPFSAGPRNCIGQRFALLEEK 458          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4FN_HUMAN (Cytochrome P450 4F22 OS=Homo sapiens GN=CYP4F22 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.987e-19
Identity = 65/246 (26.42%), Postives = 119/246 (48.37%), Query Frame = 3
Query:   18 FRSVHIPGWRFLPTKRNRRMKEIDKEIRASLMGIIKNREKAM---------KAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGN---NKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            +R  H   + +  +   RR ++    +      +I+ R +A+         KA +    D + +L+     + +E         S  D+  E   F F G +TTS  ++W +  L+K+ ++QE+ R+E+ +V       + ++D L  L    M + E LR YPPVT++SR   ++ KL     +P G+   + +   H +P +W D  V + P RF +  +   ++ ++Y PF+ GPR C+GQ+F
Sbjct:  245 YRLHHYLDFIYYRSADGRRFRQACDMVHHFTTEVIQERRRALRQQGAEAWLKAKQGKTLDFIDVLLLARDEDGKE--------LSDEDIRAEADTFMFEGHDTTSSGISWMLFNLAKYPEYQEKCREEIQEVMKGRELEELEWDDLTQLPFTTMCIKESLRQYPPVTLVSRQCTEDIKLPDGRIIPKGIICLVSIYGTHHNPTVWPDSKV-YNPYRF-DPDNPQQRSPLAYVPFSAGPRNCIGQSF 480          
The following BLAST results are available for this feature:
BLAST of CN188375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
CP4D2_DROME8.918e-2027.43Cytochrome P450 4d2 OS=Drosophila melanogaster GN=... [more]
C13A8_CAEEL8.918e-2027.95Putative cytochrome P450 CYP13A8 OS=Caenorhabditis... [more]
CP4AP_PIG1.165e-1932.75Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2... [more]
CP4AO_PIG1.165e-1932.75Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2... [more]
CP3AH_CAVPO1.165e-1928.43Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17... [more]
C76A1_SOLME1.165e-1931.78Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C6A23_DROME1.165e-1927.75Probable cytochrome P450 6a23 OS=Drosophila melano... [more]
CP6J1_BLAGE1.521e-1931.25Cytochrome P450 6j1 OS=Blattella germanica GN=CYP6... [more]
CP4CU_BLAGE1.521e-1927.18Cytochrome P450 4c21 OS=Blattella germanica GN=CYP... [more]
CP4FN_HUMAN1.987e-1926.42Cytochrome P450 4F22 OS=Homo sapiens GN=CYP4F22 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188375 ID=CN188375; Name=CN188375; organism=Citrus sinensis; type=EST; length=769bp
GAGGCACAATGCAAGTCTTTCGTTCAGTTCACATTCCAGGATGGAGGTTT
TTACCTACAAAGAGAAATAGGAGAATGAAAGAAATTGACAAGGAAATCCG
GGCTTCATTGATGGGAATCATCAAAAATAGGGAGAAGGCAATGAAAGCAG
GGGAAGCTGCGAATAATGACTTGTTAGGCATACTGATGGAAACCAGTTTT
AGAGAGATTGAAGAACATGGAAATAACAAAAATGTTGGGTTCAGCATGAA
CGATGTGATCGAAGAGTGTAAGCTATTTTACTTTGCCGGCCAAGAGACTA
CCTCTGTTTTGCTTAATTGGACGATGGTCTTATTGAGCAAGCATCAAGAT
TGGCAAGAACGTGCAAGGCAAGAGGTTTTGCAAGTGTTTGGCAATAATAA
GCCCGACTATGATGGATTGAATCACCTCAAAATTGTCCAGATGATACTTT
ATGAGGTACTCAGGCTTTATCCGCCCGTAACTATGCTTAGTCGAGCTGTT
CTTAAGGAAACGAAACTCGGAAACTTGACATTACCCGCTGGGGTTCAAAT
TGGCTTGCCAATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACG
ATGCAGTTGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCG
GCGAAAAATCAAGTTTCATATTTCCCATTCGCATTGGGTCCTAGGATATG
TGTTGGACAAAATTTTTGCTCTAGTAGAAGCAAAAATGGCCACGACAATG
ATTCTTCAAAACTACTCAT
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