CN188375

Overview
NameCN188375
Unique NameCN188375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4Z1_HUMAN (Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.781e-19
Identity = 63/220 (28.64%), Postives = 113/220 (51.36%), Query Frame = 3
Query:   81 EIDKEIRASLMGIIKNREKAMK------AGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            + ++E+      +I++R++++K        +    D L IL+       ++        FS  D+  E K F FAG +TTS  ++W +  L+K+ + Q+R R E+ ++ G+     ++ L+ +    M + E LRLY PV  +SR + K  T     +LPAG+ + + +  +H +P  W D  V F P RF+   S+   +  ++ PF+ G R C+GQ+F
Sbjct:  248 KFNQELHQFTEKVIQDRKESLKDKLKQDTTQKRRWDFLDILLSAKSENTKD--------FSEADLQAEVKTFMFAGHDTTSSAISWILYCLAKYPEHQQRCRDEIRELLGDGSSITWEHLSQMPYTTMCIKECLRLYAPVVNISRLLDKPITFPDGRSLPAGITVFINIWALHHNPYFWEDPQV-FNPLRFSRENSEKI-HPYAFIPFSAGLRNCIGQHF 457          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4X1_HUMAN (Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.550e-19
Identity = 67/224 (29.91%), Postives = 113/224 (50.45%), Query Frame = 3
Query:   72 RMKEIDKEIRASLMGIIKNREKAMKAGEAANN-------DLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            R +++ + +      II+ R+K+++AG   +N       D L I++       +E G++    FS  DV  E   F  AG +T +  ++W +  L+ + + QER R+EV  + G+     +D L  +    M + E  RL P V  +SR + K  T     TLPAG+ + L +  +H +P +W +  V F P RF++  S   ++  +Y PF+ G R C+GQ F
Sbjct:  246 RFQKLSRVLNQYTDTIIQERKKSLQAGVKQDNTPKRKYQDFLDIVLSAK----DESGSS----FSDIDVHSEVSTFLLAGHDTLAASISWILYCLALNPEHQERCREEVRGILGDGSSITWDQLGEMSYTTMCIKETCRLIPAVPSISRDLSKPLTFPDGCTLPAGITVVLSIWGLHHNPAVWKNPKV-FDPLRFSQENSD-QRHPYAYLPFSAGSRNCIGQEF 459          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.550e-19
Identity = 65/225 (28.89%), Postives = 105/225 (46.67%), Query Frame = 3
Query:   51 LPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLF----YFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDG-LNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVG 707
            L + R +  +++ K +    M  +K RE+  K G     D L +L+E         G  K+    +++   E K+F    + AG ETTS  + W +  L +H +   + + E+ Q    N+   D  + +L  +Q +L E LRL+PP+  L  R  +++TK     +P   Q+ +    + +DPE W DD + FKPERF               PF  G R+CVG
Sbjct:  237 LQSLRKKMARDMGKAVEIMSM-FLKEREEERKKGTEKGKDFLDVLLEFQ-------GTGKDEPAKLSE--HEIKIFVLEMFLAGTETTSSSVEWALTELLRHPEAMAKVKTEISQAIEPNRKFEDSDIENLPYMQAVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECW-DDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVG 450          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP134_DROME (Probable cytochrome P450 313a4 OS=Drosophila melanogaster GN=Cyp313a4 PE=2 SV=4)

HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18
Identity = 52/169 (30.77%), Postives = 93/169 (55.03%), Query Frame = 3
Query:  240 FSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVF---GNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            F++ +V +E  +  F   ETT+  + +T++LL+   ++QERA +E+  +F   G+    Y     +  + +IL E +R+ PPV ++SR   ++ KL N + +P GVQI + +  +H+  ++WG DA  F P+ F    +   K+  +Y PF  G R C+G  +    +K
Sbjct:  284 FTLKNVEDESNIIVFGAFETTANAVYYTLMLLAMFPEYQERAFEEIKTIFPNTGDFDVSYADTQQMVYLDLILNESMRVIPPVPVVSRQTSQDLKLSNGIVVPKGVQIAIDIYHMHRSKKIWGPDAETFNPDHFLPH-NIQDKHPYAYIPFTKGIRNCIGWRYALISAK 451          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C4G15_DROME (Cytochrome P450 4g15 OS=Drosophila melanogaster GN=Cyp4g15 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18
Identity = 55/223 (24.66%), Postives = 115/223 (51.57%), Query Frame = 3
Query:   78 KEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK--PDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL--GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            +E DKE  + + G+   +   +K      ++ +G     +F ++           +  ++ E+     F G +TT+   ++ + L+  HQD Q+R   E+  +FG+++    +     +K ++  L E LR+YPPV +++R + ++ KL  GN  +P G  + +  +L+H++P+++ +  V F P+ F     +A ++  ++ PF+ GPR CVG+ +   + K
Sbjct:  310 REKDKEKASPVAGLSYGQSAGLKDDLDVEDNDIGEKKRLAFLDLMLESAQNGALITDTEIKEQVDTIMFEGHDTTAAGSSFFLSLMGIHQDIQDRVLAELDSIFGDSQRPATFQDTLEMKYLERCLMETLRMYPPVPLIARELQEDLKLNSGNYVIPRGATVTVATVLLHRNPKVYANPNV-FDPDNFLPE-RQANRHYYAFVPFSAGPRSCVGRKYAMLKLK 530          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C4AA1_DROME (Probable cytochrome P450 4aa1 OS=Drosophila melanogaster GN=Cyp4aa1 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18
Identity = 50/167 (29.94%), Postives = 93/167 (55.69%), Query Frame = 3
Query:  222 NNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVF--GNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            +  N  F+  D++ E   F  AGQ++    + +T+ LL+++ + Q+R   E+  +F   N  P    L+ ++ ++M + E LRLYP V +++R + +E +L   TLPAG  + +     H+   ++  D  +F+PERF+   S+  ++  ++ PF+ GPR C+G  F
Sbjct:  291 SESNRDFTEEDIVNEACTFMLAGQDSVGAAVAFTLFLLTQNPECQDRCVLELATIFEDSNRAPTMTDLHEMRYMEMCIKEALRLYPSVPLIARKLGEEVRLAKHTLPAGSNVFICPYATHRLAHIY-PDPEKFQPERFSPENSE-NRHPYAFLPFSAGPRYCIGNRF 455          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C356_FUNHE (Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=cyp3a56 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.532e-18
Identity = 58/217 (26.73%), Postives = 106/217 (48.85%), Query Frame = 3
Query:   78 KEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVS---YFPFALGPRICVGQNF 716
            K +     ASL  I  NRE + +       D L +++++     +  G  ++   + ++++ +  +F FAG ET+S  L +    L+ + +  ++ ++E+   F N  P  Y  L  ++ +  ++ E LRL+P    L R      ++  + +P  + + +P   +H+DPE+W +    FKPERF    SK  K+ +    Y PF  GPR C+G  F
Sbjct:  242 KSVTDFFYASLEKIKSNREASQQKSRV---DFLQLMIDSQ----KNSGAQQDKSLTDHEILSQSMIFIFAGYETSSSSLTFLAYNLATNPEVMKKLQEEIDATFPNKAPVHYQPLMEMEYLDCVINESLRLFPIAARLERVAKAAVEINGIVIPKDMVVMIPTWPLHRDPEIWPEPEA-FKPERF----SKKNKDNIDPYIYMPFGSGPRNCIGMRF 446          

HSP 2 Score: 22.7126 bits (47), Expect = 1.532e-18
Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FALV  K+A   ILQ YS
Sbjct:  446 FALVLIKLAVVEILQQYS 463          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C330_FUNHE (Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=cyp3a30 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.993e-18
Identity = 58/217 (26.73%), Postives = 106/217 (48.85%), Query Frame = 3
Query:   78 KEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVS---YFPFALGPRICVGQNF 716
            K +     ASL  I  NRE + +       D L +++++     +  G  ++   + ++++ +  +F FAG ET+S  L +    L+ + +  ++ ++E+   F N  P  Y  L  ++ +  ++ E LRL+P    L R      ++  + +P  + + +P   +H+DPE+W +    FKPERF    SK  K+ +    Y PF  GPR C+G  F
Sbjct:  242 KSVTDFFYASLEKIKSNREASQQKSRV---DFLQLMIDSQ----KNSGAQQDKSLTDHEILSQSMIFIFAGYETSSSSLTFLAYNLATNPEVMKKLQEEIDATFPNKAPVHYQPLMEMEYLDCVINESLRLFPIAARLERVAKAAVEINGVVIPKDMVVMIPTWPLHRDPEIWPEPEA-FKPERF----SKKNKDNIDPYIYMPFGSGPRNCIGMRF 446          

HSP 2 Score: 22.7126 bits (47), Expect = 1.993e-18
Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FALV  K+A   ILQ YS
Sbjct:  446 FALVLIKLAVVEILQQYS 463          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4AE_MOUSE (Cytochrome P450 4A14 OS=Mus musculus GN=Cyp4a14 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.197e-18
Identity = 61/207 (29.47%), Postives = 102/207 (49.28%), Query Frame = 3
Query:  120 IKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGN-NKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            ++N E+  KA +  + D L IL+   F  +E+  +      S  D+  E   F F G +TT+  ++W    L+ H + Q+R R+EV  + G+     +D L  +    M + E LRLYPPV  +SR +    T     ++P G+   + +  +H +P  W +  V F P RFA     ++ +  +Y PF+ G R C+G+ F  +  K
Sbjct:  271 LQNEEELQKARKKRHLDFLDILL---FARMEDRNS-----LSDEDLRAEVDTFMFEGHDTTASGISWIFYALATHPEHQQRCREEVQSILGDGTSVTWDHLGQMPYTTMCIKEALRLYPPVISVSRELSSPVTFPDGRSIPKGITATISIYGLHHNPRFWPNPKV-FDPSRFA---PDSSHHSHAYLPFSGGSRNCIGKQFAMNELK 465          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CYPD_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 1 OS=Bacillus subtilis GN=cypD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.869e-18
Identity = 70/224 (31.25%), Postives = 108/224 (48.21%), Query Frame = 3
Query:   63 RNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN---LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQV---SYFPFALGPRICVGQNF 716
            R +R    D +   SL+  I    +A   G+    DLL  ++     E  E  +++N+ F +         F  AG ETTS LL++    L KH D  ++A +EV +V  +  P Y  +  L  ++MIL E LRL+P     S    ++T +G    +T    + + +P +  H+D + WG DA EF+PERF        ++QV   +Y PF  G R C+G  F
Sbjct:  202 RTKRQFRYDIQTMFSLVDSIIAERRAN--GDQDEKDLLARMLNVEDPETGEKLDDENIRFQIIT-------FLIAGHETTSGLLSFATYFLLKHPDKLKKAYEEVDRVLTDAAPTYKQVLELTYIRMILNESLRLWPTAPAFSLYPKEDTVIGGKFPITTNDRISVLIPQL--HRDRDAWGKDAEEFRPERFEH------QDQVPHHAYKPFGNGQRACIGMQF 408          
The following BLAST results are available for this feature:
BLAST of CN188375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
CP4Z1_HUMAN5.781e-1928.64Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2... [more]
CP4X1_HUMAN7.550e-1929.91Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2... [more]
C76A2_SOLME7.550e-1928.89Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
CP134_DROME1.288e-1830.77Probable cytochrome P450 313a4 OS=Drosophila melan... [more]
C4G15_DROME1.288e-1824.66Cytochrome P450 4g15 OS=Drosophila melanogaster GN... [more]
C4AA1_DROME1.288e-1829.94Probable cytochrome P450 4aa1 OS=Drosophila melano... [more]
C356_FUNHE1.532e-1826.73Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=c... [more]
C330_FUNHE1.993e-1826.73Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=c... [more]
CP4AE_MOUSE2.197e-1829.47Cytochrome P450 4A14 OS=Mus musculus GN=Cyp4a14 PE... [more]
CYPD_BACSU2.869e-1831.25Probable bifunctional P-450/NADPH-P450 reductase 1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188375 ID=CN188375; Name=CN188375; organism=Citrus sinensis; type=EST; length=769bp
GAGGCACAATGCAAGTCTTTCGTTCAGTTCACATTCCAGGATGGAGGTTT
TTACCTACAAAGAGAAATAGGAGAATGAAAGAAATTGACAAGGAAATCCG
GGCTTCATTGATGGGAATCATCAAAAATAGGGAGAAGGCAATGAAAGCAG
GGGAAGCTGCGAATAATGACTTGTTAGGCATACTGATGGAAACCAGTTTT
AGAGAGATTGAAGAACATGGAAATAACAAAAATGTTGGGTTCAGCATGAA
CGATGTGATCGAAGAGTGTAAGCTATTTTACTTTGCCGGCCAAGAGACTA
CCTCTGTTTTGCTTAATTGGACGATGGTCTTATTGAGCAAGCATCAAGAT
TGGCAAGAACGTGCAAGGCAAGAGGTTTTGCAAGTGTTTGGCAATAATAA
GCCCGACTATGATGGATTGAATCACCTCAAAATTGTCCAGATGATACTTT
ATGAGGTACTCAGGCTTTATCCGCCCGTAACTATGCTTAGTCGAGCTGTT
CTTAAGGAAACGAAACTCGGAAACTTGACATTACCCGCTGGGGTTCAAAT
TGGCTTGCCAATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACG
ATGCAGTTGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCG
GCGAAAAATCAAGTTTCATATTTCCCATTCGCATTGGGTCCTAGGATATG
TGTTGGACAAAATTTTTGCTCTAGTAGAAGCAAAAATGGCCACGACAATG
ATTCTTCAAAACTACTCAT
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