CN188375

Overview
NameCN188375
Unique NameCN188375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4V2_PONAB (Cytochrome P450 4V2 OS=Pongo abelii GN=CYP4V2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.869e-18
Identity = 62/237 (26.16%), Postives = 115/237 (48.52%), Query Frame = 3
Query:   30 HIPGWRFLPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG-NNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            H  G + L T  N  + E   E+ A          + +  G A + +     ++      ++ GN      S  D+ EE   F F G +TT+  +NW++ LL  + + Q++   E+  VFG +++P   + L  L+ ++ ++ E LRL+P V + +R+V ++ ++    +  G +  +    +H+DP  +  +  EF+PERF    +   ++  +Y PF+ GPR C+GQ F     K
Sbjct:  254 HEKGLKILHTFTNNVIAERANEMNAD------EDCRGVGRGSAPSKNKRRAFLDLLLSVTDDEGNR----LSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGCNPEVQQKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRVLKGTEAVIIPYALHRDPRYF-PNPEEFQPERFFPE-NAQGRHPYAYVPFSAGPRNCIGQKFAVMEEK 478          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4AL_PIG (Taurochenodeoxycholic 6 alpha-hydroxylase OS=Sus scrofa GN=CYP4A21 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.869e-18
Identity = 56/176 (31.82%), Postives = 96/176 (54.55%), Query Frame = 3
Query:  213 EHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            E+GN+     S  DV  E   F  AG ++T+  ++W +  L+ + + Q+R R+E+  + G+     +D L+ +    M + E LRLYPPV  + R + K  T     +LPAG+ + L +  +H +P++W  +  EF P RFA G   +A++  ++ PF+ G R C+G+ F  +  K
Sbjct:  295 ENGNS----LSDTDVRAEVDTFMAAGHDSTASGISWVLYALASNPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPSVGRELSKPITFPDGRSLPAGIILSLSIYGLHHNPQVW-PNPEEFDPSRFAPG---SARHSHAFMPFSGGSRNCIGKQFAMNEMK 462          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C97B2_SOYBN (Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.358e-18
Identity = 68/270 (25.19%), Postives = 120/270 (44.44%), Query Frame = 3
Query:   30 HIPGWRFLPTK----RNRRMKEIDKEIRASLMGIIKNREKAMKAGEAAN---NDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL--------GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFA-----------EGISKAAK------NQV----SYFPFALGPRICVGQNFCSSRS 731
            +IP W+    +    R R+ ++  K I   L G+I+N +++ +  +       D L +   +  R + +    +        + ++      AG ETT+ +L W + LL+++    ++A+ EV  V G  +P ++ L  L+ +++I+ E LRLYP   +L R  LK   L            +PAG  + + +  +H+ P  W D   +F+PERF             G+  +        N+V    ++ PF  GPR CVG  F    S
Sbjct:  264 YIPYWKIPLARWIVPRQRKFQDDLKVINTCLDGLIRNAKESRQETDVEKLQQRDYLNLKDASLLRFLVDM---RGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEVDLVLGTGRPTFESLKELQYIRLIVVEALRLYPQPPLLIRRSLKSDVLPGGHKGEKDGYAIPAGTDVFISVYNLHRSPYFW-DRPDDFEPERFLVQNKNEEIEGWAGLDPSRSPGALYPNEVISDFAFLPFGGGPRKCVGDQFALMES 529          

HSP 2 Score: 25.409 bits (54), Expect = 3.358e-18
Identity = 10/17 (58.82%), Postives = 15/17 (88.24%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNY 765
            FAL+E+ +A TM+LQN+
Sbjct:  524 FALMESTVALTMLLQNF 540          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4AE_RAT (Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a14 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.747e-18
Identity = 61/207 (29.47%), Postives = 103/207 (49.76%), Query Frame = 3
Query:  120 IKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGN-NKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            ++N E+  KA +  + D L IL+   F ++E+         S  D+  E   F F G +TT+  ++W    L+ H + QER R+EV  + G+     +D L+ +    M + E LRLYPPV  +SR +    T     ++P G+   + +  +H +P  W +  V F P RF+     + ++  +Y PF+ G R C+G+ F  +  K
Sbjct:  271 LQNEEELQKARKKRHLDFLDILL---FAKMED-----GKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQIPYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRSIPKGITTTILIYGLHHNPSYWPNPKV-FDPSRFS---PDSPRHSHAYLPFSGGARNCIGKQFAMNELK 465          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP6A8_DROME (Cytochrome P450 6a8 OS=Drosophila melanogaster GN=Cyp6a8 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.894e-18
Identity = 60/198 (30.30%), Postives = 104/198 (52.53%), Query Frame = 3
Query:  165 NDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD--YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLG---NLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSKNG 740
            ND + +L+E  + +E+     +   G +M +V+ +  +F+ AG ET+S  + + +  L+K+ D Q++ R EV +V   +  +  Y+    LK +  +L E LRLY  V  L R   K   +    N  + AG  + +P   +H DP ++  +  EF+PERF+   S A +  V++ PF  GPR C+G  F   +++ G
Sbjct:  269 NDFMDMLIELKNQKEMTLENGDVVRGLTMEEVLAQAFVFFIAGFETSSSTMGFALYELAKNPDIQDKVRAEVEEVIEQHDQNFTYECTKDLKYLNQVLDETLRLYTIVPNLDRMAAKRYVVPGHPNFVIEAGQSVIIPSSAIHHDPSIY-PEPFEFRPERFSPEES-AGRPSVAWLPFGDGPRNCIGLRFGQMQARIG 464          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4X1_RAT (Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.894e-18
Identity = 64/218 (29.36%), Postives = 113/218 (51.83%), Query Frame = 3
Query:   78 KEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREI---EEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            +E+ K I      II++R+K +K  +  N D        +F +I    + G+ K   FS  D+  E   F +AG + ++  ++W +  L+ + + Q+R R E+  + G+     ++ L+ +    M + E LRL PP+  +SR + K   L    +LPAG+ + L +  +H +P +W D  V F P RF +  S+  ++  ++ PF+ GPR C+GQ F
Sbjct:  248 QELGKVIHQCTEKIIQDRKKTLK--DQVNQD--DTQTSQNFLDIVLSAQAGDEK--AFSDADLRSEVNTFMWAGHDASAASISWLLYCLALNPEHQDRCRTEIRSILGDGSSITWEQLDEIPYTTMCIKETLRLIPPIPSISRELSKPLTLPDGHSLPAGMTVVLSIWGLHHNPAVWKDPKV-FDPLRFTKENSE-QRHPCAFLPFSSGPRNCIGQQF 457          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C97B1_PEA (Cytochrome P450 97B1 OS=Pisum sativum GN=CYP97B1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.894e-18
Identity = 70/273 (25.64%), Postives = 121/273 (44.32%), Query Frame = 3
Query:   30 HIPGWRFLPTK----RNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHG------NNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL--------GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF--------AEG-------------ISKAAKNQVSYFPFALGPRICVGQNFCSSRS 731
            +IP W+F   +    R R+ ++  K I   L G+I+N +++ +  +         L +  +  +++        + + V      + ++      AG ETT+ +L W + LL+++ D  ++A+ EV  V G  KP ++ L  L+ +++I+ E LRLYP   +L R  LK   L           T+PAG  + + +  +H+ P  W D   +F+PERF         EG                   +  ++ PF  GPR CVG  F    S
Sbjct:  273 YIPYWKFPLARWIVPRQRKFQDDLKVINTCLDGLIRNAKESRQETDVEK------LQQRDYSNLKDASLLRFLVDMRGVDVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPDKMKKAQAEVDLVLGMGKPTFELLKKLEYIRLIVVETLRLYPQPPLLIRRSLKPDVLPGGHKGDKDGYTIPAGTDVFISVYNLHRSPYFW-DRPNDFEPERFLVQNNNEEVEGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMES 538          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C6A20_DROME (Probable cytochrome P450 6a20 OS=Drosophila melanogaster GN=Cyp6a20 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.894e-18
Identity = 60/219 (27.40%), Postives = 108/219 (49.32%), Query Frame = 3
Query:   72 RMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG--NNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN--LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            RMK   +E+    M II++            +D + +L+E   +   ++G+ +N G + N++  +  +F+ AG ET+S  + + +  L+ HQD Q++ R E+  V    N K DYD +  +  ++ ++ E +R  P V  L R   +  +  N    +  G  + +P + +H DPE + +   +F PERF E      +   ++ PF  GPR C+G  F
Sbjct:  237 RMKATVQEVEDFYMNIIRDTVDYRVKNNVKRHDFVDMLIEMKLKF--DNGDKEN-GLTFNEIAAQAFIFFLAGFETSSTTMGFALYELACHQDIQDKLRTEINTVLKQHNGKLDYDSMREMTYLEKVIDETMRKRPVVGHLIRVATQHYQHTNPKYNIEKGTGVIVPTLAIHHDPEFYPEPE-KFIPERFDED-QVQQRPACTFLPFGDGPRNCIGLRF 450          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: THAS_MOUSE (Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 6.391e-18
Identity = 67/257 (26.07%), Postives = 118/257 (45.91%), Query Frame = 3
Query:   18 FRSVHIPGWRFLPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETS----------FREIEE---------------HGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNH-LKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVG 707
            F S+ +P  R LP   N+   E++      +  +I  R++  +A E    D L ++++            F  + E               H  + +  F++++++ +  LF  AG E  +  L++   LL+ H D QER  +EV    G +  P+Y  L   L  + M++ E LR+YPP    +R   ++ ++    +PAG  + + +  +H DPE W +    F PERF    ++  +   +Y PF  GPR C+G
Sbjct:  232 FPSIMVPLARILP---NKNRDELNGFFNTLIRNVIALRDQ--QAAEERRRDFLQMVLDAQHSMNSVGVEGFDMVPESLSSSECTKEPPQRCHPTSTSKPFTVDEIVGQAFLFLIAGHEVITNTLSFITYLLATHPDCQERLLKEVDLFMGKHPAPEYHSLQEGLPYLDMVISETLRMYPPAFRFTREAAQDCEVLGQRIPAGTVLEIAVGALHHDPEHWPNPET-FDPERFT-AEARLQRRPFTYLPFGAGPRSCLG 481          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP4P3_DROME (Probable cytochrome P450 4p3 OS=Drosophila melanogaster GN=Cyp4p3 PE=2 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 6.391e-18
Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = 3
Query:  255 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGN--NKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            + EE     F G +TTS+ L + ++ +S + + QE+  QE+     +  N  +   LN LK ++  + E +RL+P V  + R   +ET+L N L LP G QI + +  +H++PE W D   EF+PERF    S+  ++  +Y PF+ G R C+GQ F     K
Sbjct:  312 ICEEVDTLMFEGYDTTSIGLMFGLMNMSLYPEEQEKCYQEIQANIDDELNILNIGQLNKLKNLEYFIKETMRLFPSVPAMGRETTRETELSNGLILPKGSQIFVHVFDIHRNPEYW-DSPEEFRPERFLPENSQ-NRHTYAYIPFSAGQRNCIGQKFAMQEMK 472          
The following BLAST results are available for this feature:
BLAST of CN188375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
CP4V2_PONAB2.869e-1826.16Cytochrome P450 4V2 OS=Pongo abelii GN=CYP4V2 PE=2... [more]
CP4AL_PIG2.869e-1831.82Taurochenodeoxycholic 6 alpha-hydroxylase OS=Sus s... [more]
C97B2_SOYBN3.358e-1825.19Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=... [more]
CP4AE_RAT3.747e-1829.47Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a... [more]
CP6A8_DROME4.894e-1830.30Cytochrome P450 6a8 OS=Drosophila melanogaster GN=... [more]
CP4X1_RAT4.894e-1829.36Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1... [more]
C97B1_PEA4.894e-1825.64Cytochrome P450 97B1 OS=Pisum sativum GN=CYP97B1 P... [more]
C6A20_DROME4.894e-1827.40Probable cytochrome P450 6a20 OS=Drosophila melano... [more]
THAS_MOUSE6.391e-1826.07Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 P... [more]
CP4P3_DROME6.391e-1834.36Probable cytochrome P450 4p3 OS=Drosophila melanog... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188375 ID=CN188375; Name=CN188375; organism=Citrus sinensis; type=EST; length=769bp
GAGGCACAATGCAAGTCTTTCGTTCAGTTCACATTCCAGGATGGAGGTTT
TTACCTACAAAGAGAAATAGGAGAATGAAAGAAATTGACAAGGAAATCCG
GGCTTCATTGATGGGAATCATCAAAAATAGGGAGAAGGCAATGAAAGCAG
GGGAAGCTGCGAATAATGACTTGTTAGGCATACTGATGGAAACCAGTTTT
AGAGAGATTGAAGAACATGGAAATAACAAAAATGTTGGGTTCAGCATGAA
CGATGTGATCGAAGAGTGTAAGCTATTTTACTTTGCCGGCCAAGAGACTA
CCTCTGTTTTGCTTAATTGGACGATGGTCTTATTGAGCAAGCATCAAGAT
TGGCAAGAACGTGCAAGGCAAGAGGTTTTGCAAGTGTTTGGCAATAATAA
GCCCGACTATGATGGATTGAATCACCTCAAAATTGTCCAGATGATACTTT
ATGAGGTACTCAGGCTTTATCCGCCCGTAACTATGCTTAGTCGAGCTGTT
CTTAAGGAAACGAAACTCGGAAACTTGACATTACCCGCTGGGGTTCAAAT
TGGCTTGCCAATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACG
ATGCAGTTGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCG
GCGAAAAATCAAGTTTCATATTTCCCATTCGCATTGGGTCCTAGGATATG
TGTTGGACAAAATTTTTGCTCTAGTAGAAGCAAAAATGGCCACGACAATG
ATTCTTCAAAACTACTCAT
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