CN188370

Overview
NameCN188370
Unique NameCN188370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2433 contig Csv1_Contig2433:313..1127. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL3_ARATH (Probable 6-phosphogluconolactonase 3 OS=Arabidopsis thaliana GN=At5g24420 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.971e-36
Identity = 90/186 (48.39%), Postives = 122/186 (65.59%), Query Frame = -1
Query:  276 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSA----EEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPAR--MAQPTNGKLVWFLDKPAASKL 815
            DERV A    DSNYKLA EG LSKVPI   ++++I+  L+A    E  A  YE  ++ LVK +++ +S  +  P+FDL LLGMG DGH+ASLFPNH  ++ K +WV++ITDSPKPPP+RITFTLPVINS       +  ++ A++V    + +  N  SLP+    AQ  N   VW+LD+ AAS+L
Sbjct:   73 DERVCAWEDPDSNYKLAMEGFLSKVPIPDKNIYAIDKHLAADGNAEHCATLYEECLKNLVKEKIIPISKKTGYPEFDLQLLGMGPDGHMASLFPNHPQINEKQKWVTYITDSPKPPPKRITFTLPVINSTLYNLMAICDKAPAKSV---AEIMKHNNLSLPSAHLSAQVEN---VWYLDQAAASEL 252          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana GN=At3g49360 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 4.390e-36
Identity = 87/184 (47.28%), Postives = 121/184 (65.76%), Query Frame = -1
Query:  276 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEE----AADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKL 815
            DERV A +H+DSNYKLA +G LSKVP+   ++++I++ L AE     AA+ YE  ++Q V   ++     S  P+FDL LLGMG DGH+ASLFP H+ ++ K +WV+ ITDSPKPP +RIT TLPVIN AS     V  + +A++V  A++    +   LPA      + ++VWFLD+ AASKL
Sbjct:   73 DERVCAWDHADSNYKLAYDGFLSKVPVPAENIYAIDNGLGAEGNAELAAERYEECLKQKVNQNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHAQINEKVKWVTSITDSPKPPSKRITLTLPVINCASYNVMAVCDKEQADSVAAALN----HTKDLPAGRL-TADVEVVWFLDQAAASKL 251          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_BOVIN (6-phosphogluconolactonase OS=Bos taurus GN=PGLS PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.780e-36
Identity = 83/185 (44.86%), Postives = 117/185 (63.24%), Query Frame = -1
Query:  261 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQSVQF 815
            DER+V   H++S Y L +  LLSK+PI  S V +IN +L  EEAA++Y   +RQ  +   +        P FDL++LG+G DGH  SLFP+H +L  + + V+ I+DSPKPPP+R+T TLPV+N+A       TGE KA  +   ++D   N   LPA + QP+ GKL WFLD+ AA++L +V F
Sbjct:   79 DERLVPFEHAESTYGLYRTHLLSKLPIFDSQVITINPALPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIYVATGEGKAAILKRILEDKEEN--PLPAALVQPSAGKLCWFLDE-AAARLLTVPF 252          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_HUMAN (6-phosphogluconolactonase OS=Homo sapiens GN=PGLS PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.846e-35
Identity = 82/185 (44.32%), Postives = 116/185 (62.70%), Query Frame = -1
Query:  261 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQSVQF 815
            DER+V  +H++S Y L +  LLS++PI  S V +IN  L  EEAA++Y   +RQ  +   +        P FDL++LG+G DGH  SLFP+H +L  + + V+ I+DSPKPPP+R+T TLPV+N+A       TGE KA  +   ++D   N   LPA + QP  GKL WFLD+ AA++L +V F
Sbjct:   79 DERLVPFDHAESTYGLYRTHLLSRLPIPESQVITINPELPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEEN--PLPAALVQPHTGKLCWFLDE-AAARLLTVPF 252          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_MOUSE (6-phosphogluconolactonase OS=Mus musculus GN=Pgls PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.854e-35
Identity = 82/185 (44.32%), Postives = 118/185 (63.78%), Query Frame = -1
Query:  261 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQSVQF 815
            DER+V  +H++S Y L +  LLSK+PI  S V +IN +L  E+AA++Y   +RQ ++   V        P FDL++LG+G DGH  SLFP+H +L  + + V+ I+DSPKPPP+R+T TLPV+N+A +     TGE KA  +   ++D      +LPA + QP  G L WFLD+ AA++L SV F
Sbjct:   79 DERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTINPALPVEDAAEDYARKLRQALQGDAV--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAAQSIIFVATGEGKAAVLKRILED---KEGTLPAALVQPRTGALCWFLDE-AAARLLSVPF 251          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_RAT (6-phosphogluconolactonase OS=Rattus norvegicus GN=Pgls PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.146e-34
Identity = 82/185 (44.32%), Postives = 115/185 (62.16%), Query Frame = -1
Query:  261 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQSVQF 815
            DER+V  +H++S Y L +  LLSK+PI  S V +I+ +L  E+AA++Y   +RQ  +   V        P FDL++LG+G DGH  SLFP H +L  + + V+ I DSPKPPP+R+T TLPV+N+A +     TGE KA  +   ++D      +LPA M QP  G L WFLD+ AA++L SV F
Sbjct:   79 DERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTIDPALPVEDAAEDYARKLRQAFQGDTV--------PVFDLLILGVGPDGHTCSLFPGHPLLQEREKIVAPIGDSPKPPPQRVTLTLPVLNAAQSVIFVATGEGKAAVLKRILED---QESALPAAMVQPRTGALCWFLDE-AAARLLSVPF 251          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL4_ARATH (Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana GN=At5g24410 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.478e-33
Identity = 86/184 (46.74%), Postives = 116/184 (63.04%), Query Frame = -1
Query:  276 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSA----EEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKL 815
            DERVV  +H DSNYKLA +G LSKVPI  ++++ I+   +A    + AA  YE  +++LV   ++     S  P+FDL LLGMG DGH+ASLFP H  +  K   V++ITDSPKPPP+RITFTLPVIN AS     V  E++A+AV    +    +   LPA      + + +WFLD+ AASK+
Sbjct:   79 DERVVPLDHEDSNYKLAFDGFLSKVPIPIANIYPIDKDCAALGDAKSAALLYEECLKRLVNRNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHYQIKEKANLVTYITDSPKPPPKRITFTLPVINCASYNLMAVCDEAQADAVAKVFN----HNFDLPAAWL-TADVEAIWFLDQAAASKI 257          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_SCHPO (Probable 6-phosphogluconolactonase OS=Schizosaccharomyces pombe GN=SPCC16C4.10 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.025e-26
Identity = 73/188 (38.83%), Postives = 99/188 (52.66%), Query Frame = -1
Query:  273 DERVVAKNHSDSNYKLAKEGLLSKVP-IVPSHVHSINDSLSAEE------AADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQ 815
            DER+V  +  +SNY L K+ +  K     P  +H+IN  L  E        ADEYE   +QLV   +   S     P FDL+LLG G DGH  SLFP+H VL     WV+ +TDSPKPP +RIT TLPV+  A       TG  K + + + I+D     PS  A + +    +  WF+D  A++ L+
Sbjct:   68 DERIVPLDDENSNYALCKKLIFDKFEGFDPKKIHTINPELLKENPIDPQNVADEYE---KQLV--HVFANSSTVKVPVFDLLLLGCGPDGHTCSLFPDHEVLQEDVAWVAPVTDSPKPPKDRITLTLPVVTHAQAIAFVTTGAGKKDILPIVIEDFTSKLPS--ALITRNNLTRTSWFVDDEASANLE 248          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_DROME (Probable 6-phosphogluconolactonase OS=Drosophila melanogaster GN=CG17333 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.054e-21
Identity = 68/186 (36.56%), Postives = 94/186 (50.54%), Query Frame = -1
Query:  264 DERVVAKNHSDSNYKLAKEGLLSKVPIVP-SHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNH-SVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQSVQ 815
            DER V  + SDS Y   +   L+++P +  S     + S   +  A +YE  ++             S   +FDL+LLGMG DGH  SLFP   + L    + V  I +SPKPPPERITFTLP+IN A N    VTG +KA  V     DL       PA    PT G+L   +D  A  ++++++
Sbjct:   74 DERYVRLDDSDSTYGAYRAEWLTQLPCIQESQFVRADTSQPLDACAADYEAKVK-------------SQVDRFDLLLLGMGPDGHTCSLFPEQPATLQETKRLVIPIRNSPKPPPERITFTLPLINKARNVAFVVTGAAKASVVKSVFVDLD---KKFPAAWVNPTKGQLTLIVDAGAGKEIETLK 243          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCTU (6-phosphogluconolactonase OS=Mycobacterium tuberculosis GN=pgl PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.980e-20
Identity = 68/184 (36.96%), Postives = 94/184 (51.09%), Query Frame = -1
Query:  270 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDI--SDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQS 815
            DER V ++  + N K A+  LL+ V I  + VH     ++A +     + D   L   +++  S       P FD+ LLGMG +GH+ SLFP+   +    + V  + DSPKPPP RIT TLP I  +      V+G  KA+AV  AI    P   S+PA  A      L W LD+ AA+KL S
Sbjct:   71 DERYVPEDDDERNLKQARRALLNHVDIPSNQVHP----MAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADP--VSVPAAGAVGRQNTL-WLLDRDAAAKLPS 247          
The following BLAST results are available for this feature:
BLAST of CN188370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
6PGL3_ARATH1.971e-3648.39Probable 6-phosphogluconolactonase 3 OS=Arabidopsi... [more]
6PGL2_ARATH4.390e-3647.28Probable 6-phosphogluconolactonase 2 OS=Arabidopsi... [more]
6PGL_BOVIN9.780e-3644.866-phosphogluconolactonase OS=Bos taurus GN=PGLS PE... [more]
6PGL_HUMAN2.846e-3544.326-phosphogluconolactonase OS=Homo sapiens GN=PGLS ... [more]
6PGL_MOUSE4.854e-3544.326-phosphogluconolactonase OS=Mus musculus GN=Pgls ... [more]
6PGL_RAT3.146e-3444.326-phosphogluconolactonase OS=Rattus norvegicus GN=... [more]
6PGL4_ARATH3.478e-3346.74Probable 6-phosphogluconolactonase 4 OS=Arabidopsi... [more]
6PGL_SCHPO7.025e-2638.83Probable 6-phosphogluconolactonase OS=Schizosaccha... [more]
6PGL_DROME3.054e-2136.56Probable 6-phosphogluconolactonase OS=Drosophila m... [more]
6PGL_MYCTU1.980e-2036.966-phosphogluconolactonase OS=Mycobacterium tubercu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188370 ID=CN188370; Name=CN188370; organism=Citrus sinensis; type=EST; length=815bp
GAGGAAGGCTTTCTCATTGAGGCTCCAACATTATTTACCTCATCTTACAA
AAAAGATCACAACACTTCTCAACCCCACTAGAAAAGAGAGGATTAAAAAG
AGAATCTAGGGGGAAAAAAGGCCAAAATGGAGAATTCAACCCAAAGCAAC
ATAAAAGAAGTGGCGCCTAACGGAAGAAGCTAAAAGGATCAATAGTTCTC
AAACCCCTCCACTACATACAAACATACACTTGGGCAAGAATTGCTTTGAC
CCTACTCACAAAATTGAACACTTTGGAGCTTTGAGGCAGCCGGCTTGTCC
AAAAACCATACCAACTTCCCATTTGTTGGCTGGGCCATTCGTGCTGGCAG
TGATGGGCAATTAGGTCCAAGGTCATCAATCGCCAAGTGCACAGCCTCTG
CCTTGCTCTCACCTGTCACGACCACAACTACATTGGATGCTGAGTTGATG
ACAGGCAAAGTGAATGTGATCCTCTCTGGTGGGGGTTTAGGCGAATCAGT
GATAAAGCTTACCCACTGATTTTTCACATCAAGCACCGAATGGTTAGGGA
ACAGTGAGGCAACATGGCCATCAGAGCCCATTCCAAGAAGAATGAGGTCA
AATTTGGGGCAGTCACTAATATCAGAGACACAGACCATCCGGGTTTTCAC
CAGCTGTCGGATGTCAAACTCATACTCATCAGCAGCCTCCTCTGCTGACA
ATGAATCATTAATGGAATGTACGTGACTGGGAACTATCGGAACCTTGGAC
AAAAGGCCTTCCTTTGCAAGCTTATAATTGCTATCAGAATGATTTTTTGC
CACTACGCGTTCGTC
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