CN188370

Overview
NameCN188370
Unique NameCN188370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2433 contig Csv1_Contig2433:313..1127. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCBO (6-phosphogluconolactonase OS=Mycobacterium bovis GN=pgl PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.980e-20
Identity = 68/184 (36.96%), Postives = 94/184 (51.09%), Query Frame = -1
Query:  270 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDI--SDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQS 815
            DER V ++  + N K A+  LL+ V I  + VH     ++A +     + D   L   +++  S       P FD+ LLGMG +GH+ SLFP+   +    + V  + DSPKPPP RIT TLP I  +      V+G  KA+AV  AI    P   S+PA  A      L W LD+ AA+KL S
Sbjct:   71 DERYVPEDDDERNLKQARRALLNHVDIPSNQVHP----MAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADP--VSVPAAGAVGRQNTL-WLLDRDAAAKLPS 247          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_STRCO (6-phosphogluconolactonase OS=Streptomyces coelicolor GN=pgl PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.825e-20
Identity = 68/186 (36.56%), Postives = 93/186 (50.00%), Query Frame = -1
Query:  276 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDS-----LSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGP-NCPSLPARMAQPTNGKLVWFLDKPAASKL 815
            DER + +   + N   A++ LL  VP+ P  VH++  S        E AA  Y     Q + T  V  +  +  P FD++LLG+G D HVASLFP H  +    + V  +  SPKPPP RI+ TLP I +A        GE KA AV +A+   G    P+  AR       + +W LD  AAS+L
Sbjct:   75 DERFLPEGDPERNVTQAQQALLDSVPLDPKRVHAMAASDGPYGSDVEAAAAAYA----QELATASVPENHAA-VPSFDVLLLGVGPDTHVASLFPEHPGVRETERTVIGVHGSPKPPPIRISLTLPAIRAAREVWLLAAGEDKANAVAMALSGAGEIQAPAAGAR----GRARTLWLLDSAAASQL 251          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_SYNY3 (6-phosphogluconolactonase OS=Synechocystis sp. (strain PCC 6803) GN=pgl PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 2.189e-19
Identity = 65/183 (35.52%), Postives = 97/183 (53.01%), Query Frame = -1
Query:  273 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLS-AEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAV-HLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQ 815
            DER V+ +H DSN ++A+   L +V I  +++H +  + +  E+ A  YE ++    +       +    P FDLILLG+G DGH ASLFP+   L V ++    IT   K    R+TFT+P+IN A +    V G SK  A+  +   +  P     PAR  QP  G+L+W LD+ A   L+
Sbjct:   69 DERYVSVDHPDSNQRMARLAWLDQVDIPEANIHPMPTAAADPEQDAQTYENELATFFQV------EAGHFPAFDLILLGLGDDGHTASLFPHTPALTVGDR---LITVGNKDGQPRLTFTIPLINRARSVVFLVAGASKQHALGEIFAPEADPQ--QYPARFIQP-QGELIWLLDQQAGENLR 239          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_CAEEL (Putative 6-phosphogluconolactonase OS=Caenorhabditis elegans GN=Y57G11C.3 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18
Identity = 54/136 (39.71%), Postives = 73/136 (53.68%), Query Frame = -1
Query:  282 ADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLD--VKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAAS 683
            A  YE  +R     + +    +++  +FD++ LG+G DGH AS+FP    L+   +  WVS ITDSPKPPP RIT TL  +  A N    + G+ KAE V    D         PA  A+P N KL  FLD+ AA+
Sbjct:  125 AQHYEISLR-----KYLLPEQLNNTARFDILFLGVGPDGHTASIFPGKERLEKITELNWVSVITDSPKPPPSRITLTLQTLQHAKNVAFIICGKQKAEIVRGICD----RDQKYPAAQARPFNDKLTLFLDEDAAT 251          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCLE (6-phosphogluconolactonase OS=Mycobacterium leprae GN=pgl PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.161e-18
Identity = 64/180 (35.56%), Postives = 91/180 (50.56%), Query Frame = -1
Query:  276 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKL 815
            DER V K+  + N K A+  LL  + I PS VH +       E  ++ E       +      +     P FD+ L+GMG +GH+ SLFPN   +   ++ V  + +SPKPPPERIT TL  I  +      V+G +KA+AV  A+   G    S+PA  A      L W LD+ AA+K+
Sbjct:   71 DERYVPKDDDERNEKQARVALLDHIDIPPSQVHPM--PAGDGEFGNDLEAAALAYEQLLAAYAAPGYPTPNFDVHLMGMGPEGHINSLFPNTVAVRETSRMVVGVRNSPKPPPERITLTLNAIQRSREVWLMVSGTAKADAVAAAMG--GAPSASIPAAGAVGLETTL-WLLDEEAAAKI 245          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: SOL3_YEAST (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae GN=SOL3 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18
Identity = 65/195 (33.33%), Postives = 96/195 (49.23%), Query Frame = -1
Query:  261 DERVVAKNHSDSNYKLAKEGLLSKVPIVPS-HVHSINDSLSAEEA------ADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHS---VLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQSVQF 815
            DER+V    +DSNY   K  +L K+P     +V+ +++SL   +A      A EYE  + Q++                DL+LLG G DGH  SLFP  +   +L+   + V++  DSPKPP +RITFTLPV+  A        G SK   +H   D      P+  A + +    K  WF+++ A  K+Q+  F
Sbjct:   73 DERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESNNKIAAEYERIVPQVL----------------DLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMHEIFDLKNDQLPT--ALVNKLFGEKTSWFVNEEAFGKVQTKTF 249          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS7 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain YJM789) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18
Identity = 65/195 (33.33%), Postives = 96/195 (49.23%), Query Frame = -1
Query:  261 DERVVAKNHSDSNYKLAKEGLLSKVPIVPS-HVHSINDSLSAEEA------ADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHS---VLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQSVQF 815
            DER+V    +DSNY   K  +L K+P     +V+ +++SL   +A      A EYE  + Q++                DL+LLG G DGH  SLFP  +   +L+   + V++  DSPKPP +RITFTLPV+  A        G SK   +H   D      P+  A + +    K  WF+++ A  K+Q+  F
Sbjct:   73 DERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESNNKIAAEYERIVPQVL----------------DLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMHEIFDLKNDQLPT--ALVNKLFGEKTSWFVNEEAFGKVQTKTF 249          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS6 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18
Identity = 65/195 (33.33%), Postives = 96/195 (49.23%), Query Frame = -1
Query:  261 DERVVAKNHSDSNYKLAKEGLLSKVPIVPS-HVHSINDSLSAEEA------ADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHS---VLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQSVQF 815
            DER+V    +DSNY   K  +L K+P     +V+ +++SL   +A      A EYE  + Q++                DL+LLG G DGH  SLFP  +   +L+   + V++  DSPKPP +RITFTLPV+  A        G SK   +H   D      P+  A + +    K  WF+++ A  K+Q+  F
Sbjct:   73 DERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESNNKIAAEYERIVPQVL----------------DLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMHEIFDLKNDQLPT--ALVNKLFGEKTSWFVNEEAFGKVQTKTF 249          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS1 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18
Identity = 65/195 (33.33%), Postives = 96/195 (49.23%), Query Frame = -1
Query:  261 DERVVAKNHSDSNYKLAKEGLLSKVPIVPS-HVHSINDSLSAEEA------ADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHS---VLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQSVQF 815
            DER+V    +DSNY   K  +L K+P     +V+ +++SL   +A      A EYE  + Q++                DL+LLG G DGH  SLFP  +   +L+   + V++  DSPKPP +RITFTLPV+  A        G SK   +H   D      P+  A + +    K  WF+++ A  K+Q+  F
Sbjct:   73 DERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESNNKIAAEYERIVPQVL----------------DLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMHEIFDLKNDQLPT--ALVNKLFGEKTSWFVNEEAFGKVQTKTF 249          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_ANASP (6-phosphogluconolactonase OS=Anabaena sp. (strain PCC 7120) GN=pgl PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.569e-17
Identity = 67/186 (36.02%), Postives = 98/186 (52.69%), Query Frame = -1
Query:  276 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSIN--DSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESK----AEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKL 815
            DER V+ +H DSN  +A+   L +V I   ++H++   D+  A  AA +YE  ++          S   + P  D++LLGMG D H ASLFP+   L V+++    IT   K    RITFT P IN+AS+    V G +K    A+    + DDL     + P+R  QP  G+L+W LD  A ++L
Sbjct:   69 DERYVSPDHPDSNELMARTAWLDRVDIPAENIHAVPTLDNNPAVSAA-KYEQHLQTFFN------SAPGEFPALDVVLLGMGDDAHTASLFPHTEALQVRDR---LITVGNKDGNPRITFTYPFINAASSVIFVVAGANKRPALAQVFAPSADDL-----AYPSRFIQP-QGELLWLLDAAAGAEL 238          
The following BLAST results are available for this feature:
BLAST of CN188370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
6PGL_MYCBO1.980e-2036.966-phosphogluconolactonase OS=Mycobacterium bovis G... [more]
6PGL_STRCO9.825e-2036.566-phosphogluconolactonase OS=Streptomyces coelicol... [more]
6PGL_SYNY32.189e-1935.526-phosphogluconolactonase OS=Synechocystis sp. (st... [more]
6PGL_CAEEL1.853e-1839.71Putative 6-phosphogluconolactonase OS=Caenorhabdit... [more]
6PGL_MYCLE3.161e-1835.566-phosphogluconolactonase OS=Mycobacterium leprae ... [more]
SOL3_YEAST4.128e-1833.336-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS74.128e-1833.336-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS64.128e-1833.336-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS14.128e-1833.336-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
6PGL_ANASP1.569e-1736.026-phosphogluconolactonase OS=Anabaena sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188370 ID=CN188370; Name=CN188370; organism=Citrus sinensis; type=EST; length=815bp
GAGGAAGGCTTTCTCATTGAGGCTCCAACATTATTTACCTCATCTTACAA
AAAAGATCACAACACTTCTCAACCCCACTAGAAAAGAGAGGATTAAAAAG
AGAATCTAGGGGGAAAAAAGGCCAAAATGGAGAATTCAACCCAAAGCAAC
ATAAAAGAAGTGGCGCCTAACGGAAGAAGCTAAAAGGATCAATAGTTCTC
AAACCCCTCCACTACATACAAACATACACTTGGGCAAGAATTGCTTTGAC
CCTACTCACAAAATTGAACACTTTGGAGCTTTGAGGCAGCCGGCTTGTCC
AAAAACCATACCAACTTCCCATTTGTTGGCTGGGCCATTCGTGCTGGCAG
TGATGGGCAATTAGGTCCAAGGTCATCAATCGCCAAGTGCACAGCCTCTG
CCTTGCTCTCACCTGTCACGACCACAACTACATTGGATGCTGAGTTGATG
ACAGGCAAAGTGAATGTGATCCTCTCTGGTGGGGGTTTAGGCGAATCAGT
GATAAAGCTTACCCACTGATTTTTCACATCAAGCACCGAATGGTTAGGGA
ACAGTGAGGCAACATGGCCATCAGAGCCCATTCCAAGAAGAATGAGGTCA
AATTTGGGGCAGTCACTAATATCAGAGACACAGACCATCCGGGTTTTCAC
CAGCTGTCGGATGTCAAACTCATACTCATCAGCAGCCTCCTCTGCTGACA
ATGAATCATTAATGGAATGTACGTGACTGGGAACTATCGGAACCTTGGAC
AAAAGGCCTTCCTTTGCAAGCTTATAATTGCTATCAGAATGATTTTTTGC
CACTACGCGTTCGTC
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