CN188370

Overview
NameCN188370
Unique NameCN188370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.504e-15
Identity = 61/182 (33.52%), Postives = 89/182 (48.90%), Query Frame = -1
Query:  288 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHS----INDSLSAEE--AADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPA 815
            DER V  +  DSN++  +  LL  V +   ++H     ++  L AEE   A  Y  +I  LV               FDL+LLGMG+DGH ASLFP  S   +    +  +T+SP  P +R++ +LP+IN A      V G +K E   L +  +G      P     P +G+LVW++D  A
Sbjct:  618 DERCVPLSDPDSNFQGLQAHLLQHVRVPYYNIHPMPVHLHQRLCAEEDQGAQTYASEISALVANS-----------SFDLVLLGMGTDGHTASLFP-QSPTGLDGDQLVVLTESPFRPHQRMSLSLPLINRAKKVAVLVMGRTKREITTL-VSRVGHEPKKWPISGVVPLSGQLVWYMDYEA 786          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: SOL2_YEAST (6-phosphogluconolactonase-like protein 2 OS=Saccharomyces cerevisiae GN=SOL2 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.623e-14
Identity = 61/182 (33.52%), Postives = 88/182 (48.35%), Query Frame = -1
Query:  288 DERVVAKNHSDSNYKLAKEGLLSKVPIVP---SHVHSINDSL--SAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPN-HSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPA 815
            DER+V  + ++SNY  AK  +L  +         V+ I++SL    +E AD YE      V  R     D    P FDL LLG   DGH+ASLFPN    L  K  WV  + ++P  P  RI+ T+PVI  +      V G +KA  +   ++      PS  + + +   G++ WF+D  A
Sbjct:  122 DERLVPFSSNESNYGCAKRKILDLIDTAKYGTPKVYHIDESLIDDPQECADNYE-----KVLIRGFAGRDSVKLPMFDLFLLGCAPDGHIASLFPNFQDNLREKLAWVVPVENAPSGPSTRISLTIPVICHSHRVTFVVEGATKAPIIKTIMERPEKGLPS--SIVNEGAAGRVSWFVDDDA 296          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: G6PE_HUMAN (GDH/6PGL endoplasmic bifunctional protein OS=Homo sapiens GN=H6PD PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.769e-14
Identity = 61/182 (33.52%), Postives = 86/182 (47.25%), Query Frame = -1
Query:  288 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHS----INDSLSAEE--AADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPA 815
            DER V  +  +SN++  +  LL  V I   ++H     +   L AEE   A  Y  +I  LV               FDL+LLGMG+DGH ASLFP  S   +  + +  +T SP  P  R++ +LP+IN A      V G  K E   L +  +G      P     P +G+LVW++D  A
Sbjct:  620 DERCVPLSDPESNFQGLQAHLLQHVRIPYYNIHPMPVHLQQRLCAEEDQGAQIYAREISALVANS-----------SFDLVLLGMGADGHTASLFP-QSPTGLDGEQLVVLTTSPSQPHRRMSLSLPLINRAKKVAVLVMGRMKREITTL-VSRVGHEPKKWPISGVLPHSGQLVWYMDYDA 788          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_AGGAC (6-phosphogluconolactonase OS=Aggregatibacter actinomycetemcomitans GN=pgl PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.616e-14
Identity = 57/180 (31.67%), Postives = 86/180 (47.78%), Query Frame = -1
Query:  276 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKL 815
            D+R+V+ +  +SNY   ++ L   + I   ++H I          +E  F++++        +SD      FD I+LGMG+DGH +SLFP+ +  D +N  ++ I   P+    RI+ T  +I  A      VTGE KAE +         N P  PA      NG   W+LDK AA  L
Sbjct:   67 DDRMVSPSDPESNYGEVQKLLFDHIQIPAENIHRIRGE-------NEPHFELKRFQAELSAVISD----GVFDWIILGMGADGHTSSLFPHQTNFDDEN--LAVIAKHPESGQIRISKTAKLIEQAKRITYLVTGEGKAEILKEIQSTPAENLP-YPAAKIYAKNGVTEWYLDKDAAKLL 232          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: SOL1_YEAST (6-phosphogluconolactonase-like protein 1 OS=Saccharomyces cerevisiae GN=SOL1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.168e-14
Identity = 60/182 (32.97%), Postives = 89/182 (48.90%), Query Frame = -1
Query:  288 DERVVAKNHSDSNYKLAKEGLLSKVPIVP---SHVHSINDSL--SAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPN-HSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPA 815
            DER+V  + S+SNY LAK  +   +         ++ I++SL    +E AD YE   + L+K       D    P FDL LLG   DGH+ASLFPN    L     WV  + ++P  P  RI+ T+PVI  +      V G +KA  +   ++      PS  + + +   G++ WF+D  A
Sbjct:  126 DERLVPFSSSESNYGLAKRKIFDLIDTEKYGTPKIYHIDESLINDPQECADNYE---KILIKG--FAGRDSVKLPMFDLFLLGCAPDGHIASLFPNFQENLRENLAWVIPVENAPSGPSNRISLTIPVICHSHRVTFVVEGATKAPVIKTIMERPEKGLPS--SIVNEGAAGRVSWFVDDDA 300          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_THEMA (6-phosphogluconolactonase OS=Thermotoga maritima GN=pgl PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.907e-13
Identity = 55/174 (31.61%), Postives = 82/174 (47.13%), Query Frame = -1
Query:  294 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDK 815
            DER V  +   SN++   E L S+  I   +VH ++ SL  E+A ++YE +IR             S   +FDL +LGMG DGHVAS+F   +    K+  V+F   S  P   R+T T   +N++      + G+ K   +   + D       LPA   +    K VWF+ K
Sbjct:   68 DERYVPLDSDQSNFRNINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIR-------------SATDQFDLAILGMGPDGHVASIFDLET--GNKDNLVTFTDPSGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKD-----TPLPAYFVRGKE-KTVWFVGK 220          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL_HAEIN (6-phosphogluconolactonase OS=Haemophilus influenzae GN=pgl PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 8.907e-13
Identity = 54/180 (30.00%), Postives = 82/180 (45.56%), Query Frame = -1
Query:  276 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKL 815
            D+R+V  +  +SNY   ++ L   + I   ++H I            +E ++  ++   +           FD I+LGMG DGH ASLFP+ +  D +N  ++ I   P+    RI+ T  +I  A      VTGESKA+ +         N P  PA   +  NG   W+LDK A   L
Sbjct:   67 DDRMVPPSDPESNYGEVQKLLFDHIQIPAENIHRIRGENEPHFELKRFEEELSAVIPNGV-----------FDWIILGMGIDGHTASLFPHQTNFDDEN--LAVIAKHPESGQIRISKTAKLIEQAKRITYLVTGESKADILKEIQTTPAENLP-YPAAKIKAKNGVTEWYLDKAAVRLL 232          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: SOL4_YEAST (6-phosphogluconolactonase 4 OS=Saccharomyces cerevisiae GN=SOL4 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.865e-11
Identity = 63/191 (32.98%), Postives = 93/191 (48.69%), Query Frame = -1
Query:  282 DERVVAKNHSDSNYKLAKEGLL-------SKVPIVPSHVHSINDSL-SAEEAADEYEFDIRQLVKTRMVCVSDISDCP-KFDLILLGMGSDGHVASLFPN---HSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNG-KLVWFLDKPAAS 815
            DER+V      SNY   K+ +L       +++ + P+ V++IN+SL    E A+            R +     S  P  FDLILLG G DGH  SLFP    + +++  ++ V +  +SPK P +RITFTL V+  A +    V G +K   +H   D L      LP+ +     G K+ WFLD  A +
Sbjct:   75 DERLVPFEDPQSNYGQFKKTVLDPLVHQGNQLNLGPT-VYTINESLIGGGETAN------------RKIAEEYASMLPASFDLILLGCGEDGHTCSLFPGVEFNYLVEEMDRKVLWCNNSPKAPKDRITFTLAVVAEAKSVCFLVRGAAKKAIMH---DVLIVKNSELPSVLVNEMVGTKVTWFLDDEAGA 249          
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: G6PE_RABIT (GDH/6PGL endoplasmic bifunctional protein OS=Oryctolagus cuniculus GN=H6PD PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.383e-11
Identity = 55/175 (31.43%), Postives = 88/175 (50.29%), Query Frame = -1
Query:  288 DSNYKLAKEGLLSKVPIVPSHVH----SINDSLSAEE---AADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPE--RITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPA 785
            +SN++  +  LL  V +   ++H    +++  L AEE   A   Y  +I  LV            C  FD +L GMG+DGH ASLFP  S   +  + +  +T+SP  P +  R++ +LP+IN A      V G +K + + L +  +G    + P     PT+G+LVW++D  A
Sbjct:  599 ESNFQGLQAHLLQHVRVPYYNIHPMPVNLHQRLCAEEDRGAQAAYASEISALVTW----------C-SFDEVLQGMGTDGHTASLFP-QSPTGLDGEQLVVLTESPSRPHQQRRMSLSLPLINRAKKVAVLVMGRTKRD-ITLLVSRVGREPKNWPISGVLPTSGQLVWYMDYEA 760          
The following BLAST results are available for this feature:
BLAST of CN188370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
G6PE_MOUSE2.504e-1533.52GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]
SOL2_YEAST1.623e-1433.526-phosphogluconolactonase-like protein 2 OS=Saccha... [more]
G6PE_HUMAN2.769e-1433.52GDH/6PGL endoplasmic bifunctional protein OS=Homo ... [more]
6PGL_AGGAC3.616e-1431.676-phosphogluconolactonase OS=Aggregatibacter actin... [more]
SOL1_YEAST6.168e-1432.976-phosphogluconolactonase-like protein 1 OS=Saccha... [more]
6PGL_THEMA8.907e-1331.616-phosphogluconolactonase OS=Thermotoga maritima G... [more]
6PGL_HAEIN8.907e-1330.006-phosphogluconolactonase OS=Haemophilus influenza... [more]
SOL4_YEAST2.865e-1132.986-phosphogluconolactonase 4 OS=Saccharomyces cerev... [more]
G6PE_RABIT6.383e-1131.43GDH/6PGL endoplasmic bifunctional protein OS=Oryct... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188370 ID=CN188370; Name=CN188370; organism=Citrus sinensis; type=EST; length=815bp
GAGGAAGGCTTTCTCATTGAGGCTCCAACATTATTTACCTCATCTTACAA
AAAAGATCACAACACTTCTCAACCCCACTAGAAAAGAGAGGATTAAAAAG
AGAATCTAGGGGGAAAAAAGGCCAAAATGGAGAATTCAACCCAAAGCAAC
ATAAAAGAAGTGGCGCCTAACGGAAGAAGCTAAAAGGATCAATAGTTCTC
AAACCCCTCCACTACATACAAACATACACTTGGGCAAGAATTGCTTTGAC
CCTACTCACAAAATTGAACACTTTGGAGCTTTGAGGCAGCCGGCTTGTCC
AAAAACCATACCAACTTCCCATTTGTTGGCTGGGCCATTCGTGCTGGCAG
TGATGGGCAATTAGGTCCAAGGTCATCAATCGCCAAGTGCACAGCCTCTG
CCTTGCTCTCACCTGTCACGACCACAACTACATTGGATGCTGAGTTGATG
ACAGGCAAAGTGAATGTGATCCTCTCTGGTGGGGGTTTAGGCGAATCAGT
GATAAAGCTTACCCACTGATTTTTCACATCAAGCACCGAATGGTTAGGGA
ACAGTGAGGCAACATGGCCATCAGAGCCCATTCCAAGAAGAATGAGGTCA
AATTTGGGGCAGTCACTAATATCAGAGACACAGACCATCCGGGTTTTCAC
CAGCTGTCGGATGTCAAACTCATACTCATCAGCAGCCTCCTCTGCTGACA
ATGAATCATTAATGGAATGTACGTGACTGGGAACTATCGGAACCTTGGAC
AAAAGGCCTTCCTTTGCAAGCTTATAATTGCTATCAGAATGATTTTTTGC
CACTACGCGTTCGTC
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