CN188367

Overview
NameCN188367
Unique NameCN188367
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4376 contig Csv1_Contig4376:253..964. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188367 vs. ExPASy Swiss-Prot
Match: TCTP_SCHJA (Translationally-controlled tumor protein homolog OS=Schistosoma japonicum GN=TCTP PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 49/169 (28.99%), Postives = 86/169 (50.89%), Query Frame = -3
Query:  220 YQDLLTGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVD-IGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 711
            ++D ++GDE+ SDS    ++ N +++EV+  ++ V   +D   I ANPS               +V+D+V   RL    +FDKK +  Y+K ++K +  +L +E  E   IF+  I      +     D + ++GESM+ DG +    ++E    P F+++ D L E K
Sbjct:    4 FKDAISGDEMFSDSHS-PQLINDVVYEVDANFITVSNGLDSKLIAANPSGEEGQEEVSDSTE--RVIDLVHASRLVST-SFDKKSYRAYLKGYLKAIKERLQKENPERVSIFESRINEYMVNVFKNFDDYEHYIGESMNPDGMVALMNFRENGVTPYFVFLKDGLIEEK 168          
BLAST of CN188367 vs. ExPASy Swiss-Prot
Match: TCTP_XENLA (Translationally-controlled tumor protein homolog OS=Xenopus laevis GN=tpt1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13
Identity = 51/170 (30.00%), Postives = 77/170 (45.29%), Query Frame = -3
Query:  217 YQDLLTGDELLSDSFPYKEIENGILWEVEGKWVV--QGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 711
            Y+D +T DE+ SD +   E  +G+  EVEGK +   +GA+D  +    +                 VDIV   +LQE   F K  +  Y+K ++K L   L +   ER   F K  +   K +L    + QF+ GE M+ DG +    Y+E    P  ++  D L   KC
Sbjct:    4 YKDCITEDEMFSDIYKIIETPDGMCLEVEGKVIQREEGAIDDALIGGNASAEFQEDDVGGSSLTSGVDIVMNHKLQET-GFTKDSYKNYIKDYVKQLKAHLEKTNPERVNTFMKGAQETVKKILGNFKNYQFYTGERMNPDGMVGLLDYREDGITPFMIFFKDGLIIEKC 172          
BLAST of CN188367 vs. ExPASy Swiss-Prot
Match: FKSG2_HUMAN (Putative apoptosis inhibitor FKSG2 OS=Homo sapiens GN=FKSG2 PE=5 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13
Identity = 53/172 (30.81%), Postives = 86/172 (50.00%), Query Frame = -3
Query:  217 YQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEG---ATKFLLSKLSDLQFFVGESMHDDGCL-VFAYYKEGATDPTFLYMADALKEVKC 711
            +QDL++ +E+ SD +   EI NG+  EVE K + +   + D   IG N S                 VDIV    LQE   F K+ +  Y+K ++K +  KL E+R E  K  I G     K + +   + QFF+GE+++  G + +  Y K+G  DP + ++ + L+  +C
Sbjct:    4 FQDLISHNEMFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITS-VDIVTNHHLQES-IFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGNEEQIKHIFANFQNYQFFIGENLNPPGMVALLNYRKDGQYDPIYDFLRNGLEIKRC 173          
BLAST of CN188367 vs. ExPASy Swiss-Prot
Match: TCTP_WUCBA (Translationally-controlled tumor protein homolog OS=Wuchereria bancrofti PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12
Identity = 58/178 (32.58%), Postives = 87/178 (48.88%), Query Frame = -3
Query:  220 YQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFFVGESMHD---DGCLVFAYYK--EGATDPTFLYMADALKEVK 711
            ++D  T DEL SDSFP K ++ G++WE +G+ VV+   ++ + GANPS               + +D V   RLQE   + D   F +Y K F+K +   +     SE     FK+ I+     LLSK     LQFF+GE M +   +G +    Y+  E    P  + + +AL E K
Sbjct:    4 FKDAFTDDELASDSFPMKLVD-GLIWEFKGRQVVRREGEIQLAGANPSTEGEDGDEGSEECVERGIDFVLNHRLQEMNCYEDLATFKSYCKSFMKKVVELMQKNGKSEAEISEFKRKIQAWVVSLLSKDRFKQLQFFIGERMAEGQGEGQVAVVEYRDEEEGEVPYLMLVKEALVEEK 180          
BLAST of CN188367 vs. ExPASy Swiss-Prot
Match: TCTP_CAEEL (Translationally-controlled tumor protein homolog OS=Caenorhabditis elegans GN=tct-1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.571e-12
Identity = 54/179 (30.17%), Postives = 93/179 (51.96%), Query Frame = -3
Query:  217 YQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSEERQ-----EIFKKNIEGATKFLLSK--LSDLQFFVGESM---HDDGCLVFAYYK--EGATDPTFLYMADALKEVKC 711
            Y+D+ T DEL SDSFP K +++ +++E +GK VV+   ++ + G+NPS               + +DIV   +L E   + D   F  Y+K+F+K +   + +  +     + FKK I+G    LL+K    +L FF+GE      ++G +    Y+  +G   PT + + +A+ E KC
Sbjct:    4 YKDIFTDDELSSDSFPMKLVDD-LVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEEKC 181          
BLAST of CN188367 vs. ExPASy Swiss-Prot
Match: TCTP_CAEBR (Translationally-controlled tumor protein homolog OS=Caenorhabditis briggsae GN=tct-1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.680e-12
Identity = 53/179 (29.61%), Postives = 92/179 (51.40%), Query Frame = -3
Query:  217 YQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSEERQ-----EIFKKNIEGATKFLLSK--LSDLQFFVGESM---HDDGCLVFAYYK--EGATDPTFLYMADALKEVKC 711
            Y+D+ T DEL SDSFP K +++ +++E +G+ VV+   D+ + G+NPS               + +DIV   +L E   + D   F  Y+K+F+K +   + +  +     + FKK I+     LL+K    +L FF+GE      ++G +    Y+  +G   PT + + +A+ E KC
Sbjct:    4 YKDIFTDDELSSDSFPMKLVDD-LIYEFKGRHVVRKEGDIILAGSNPSAEEGAEDEGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNIIDHMEKNNRDKADVDAFKKKIQAWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAILEEKC 181          
BLAST of CN188367 vs. ExPASy Swiss-Prot
Match: TCTP_BRUMA (Translationally-controlled tumor protein homolog OS=Brugia malayi PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.500e-12
Identity = 58/178 (32.58%), Postives = 86/178 (48.31%), Query Frame = -3
Query:  220 YQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFFVGESMHD---DGCLVFAYYK--EGATDPTFLYMADALKEVK 711
            ++D  T DEL SDSFP K ++ G++WE +G+ VV+   ++ + GANPS               + +D V   RLQE   + D   F +Y K F+K +   +     SE     FK+ I      LLSK     LQFF+GE M +   +G +    Y+  E    P  + + +AL E K
Sbjct:    4 FKDAFTDDELASDSFPMKLVD-GLIWEFKGRQVVRREGEIQLAGANPSAEGEDGDEGSEECVERGIDFVLNHRLQEMNCYEDLVTFKSYCKSFMKKVVELMQKNGKSEAEISEFKRKIPAWVVSLLSKDRFKQLQFFIGERMAEGQGEGQVAVVEYRDEEDGEVPYLMLVKEALIEEK 180          
BLAST of CN188367 vs. ExPASy Swiss-Prot
Match: TCTP_IXOSC (Translationally-controlled tumor protein homolog OS=Ixodes scapularis GN=Tctp PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11
Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = -3
Query:  220 YQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKN-----IEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYY---KEGATDPTFLYMADALKEVK 711
            ++D+LTGDE+ +DS  YK +++ I +E+E + V +   +V + GANPS                 +D+V   RL E   F K  +  Y+K + K L  K  E+ +   + N     +  A K +L ++ D+QFF+GES + DG +    Y   K G   P  ++    L E K
Sbjct:    4 FKDILTGDEMFTDSVKYKLVDDCI-FEIECEHVTRKVGEVALDGANPSAEEVEEGTEEGTESG--LDLVLNMRLVET-GFSKTDYKNYLKTYTKALMDKWKEDGKSEAEVNEAKSKLTEAVKKVLPRIGDMQFFLGESSNPDGIVALLEYRPNKSGGETPVVMFFKHGLLEEK 172          
BLAST of CN188367 vs. ExPASy Swiss-Prot
Match: TCTP_ASPFU (Translationally-controlled tumor protein homolog OS=Aspergillus fumigatus GN=AFUA_1G16840 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.330e-11
Identity = 53/176 (30.11%), Postives = 86/176 (48.86%), Query Frame = -3
Query:  220 YQDLLTGDELLSDSFPYKEIENGILWEVE-GKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRL-----QEQPAFDKKPFVTYMKRFIKLLTPKLSEE-----RQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 711
            Y+D+++GDE+LSD+F  KE++ G+L+E +  K++ +   D+ + GANPS              V V DI D FRL     +E     K  F +++K ++K +  KL E+       + FKK    A K +L+   +    +G SM  D   V   ++E    P        L+E+K
Sbjct:    4 YKDIISGDEVLSDNFKIKEVD-GVLYECDCRKYLKRKNEDIQLEGANPSAEEGDDDAGGDGEEVMVHDIEDQFRLVWLKTEEGMKPSKDAFKSHLKTYMKKVLAKLQEKGVPEAEIDAFKKGAPAAVKKILANYDNYDVLMGHSMDGDAMHVLIDFREDGVTPYATLWKHGLEEMK 178          
BLAST of CN188367 vs. ExPASy Swiss-Prot
Match: TCTP_TRIPS (Translationally-controlled tumor protein homolog OS=Trichinella pseudospiralis PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11
Identity = 59/177 (33.33%), Postives = 86/177 (48.59%), Query Frame = -3
Query:  217 YQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFFVGESMH-DDGCLVFAYYKE--GATDPTFLYMADALKEVKC 711
            Y+DL +GDEL SD+FP K + N +++E  GK VV+   +V + GANPS                 +DIV   +L E P + D K F  ++K ++K L  K+     SEE    FKKN++     LL K    +LQFF G   +  +G L    Y++      P  + +   L   KC
Sbjct:    4 YRDLFSGDELCSDTFPMK-LVNDVVFEFTGKHVVRKLGEVTLEGANPSAEEFDEGTEEQMESG--IDIVLNHQLMEMPMYQDIKIFKDWIKEYMKKLVEKMKSDGESEESISKFKKNMQEYVTSLLKKDRFKELQFFSGPGENAAEGQLAIVEYRQVSDTEQPIVMLIKQGLVVEKC 177          
The following BLAST results are available for this feature:
BLAST of CN188367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
TCTP_SCHJA3.166e-1328.99Translationally-controlled tumor protein homolog O... [more]
TCTP_XENLA5.400e-1330.00Translationally-controlled tumor protein homolog O... [more]
FKSG2_HUMAN5.400e-1330.81Putative apoptosis inhibitor FKSG2 OS=Homo sapiens... [more]
TCTP_WUCBA1.203e-1232.58Translationally-controlled tumor protein homolog O... [more]
TCTP_CAEEL1.571e-1230.17Translationally-controlled tumor protein homolog O... [more]
TCTP_CAEBR2.680e-1229.61Translationally-controlled tumor protein homolog O... [more]
TCTP_BRUMA3.500e-1232.58Translationally-controlled tumor protein homolog O... [more]
TCTP_IXOSC1.018e-1130.64Translationally-controlled tumor protein homolog O... [more]
TCTP_ASPFU1.330e-1130.11Translationally-controlled tumor protein homolog O... [more]
TCTP_TRIPS2.963e-1133.33Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188367 ID=CN188367; Name=CN188367; organism=Citrus sinensis; type=EST; length=713bp
GACGAGCGGCCCCTTTTTTTTTTTTTTGGTATTCAATCTCAACCATAAAA
CCCAATAATTAACATCAGAAAAACATATTGTTTATGTCAAAATAAAAACT
AAAAAACAGCAAGCACAAGTCCCGAGTAAACCAGCACAAAAGATACATAA
AAATAACCGCGGGCAATAATTAAAATTAGAACTACAGCAGGCACTTCCTC
TTCGAAGCCCAGCTTAGCACTTCACCTCCTTCAATGCATCAGCCATATAC
AAAAATGTTGGGTCGGTCGCACCTTCCTTGTAGTAAGCAAAGACAAGACA
GCCATCATCATGCATGCTCTCCCCAACAAAGAATTGAAGGTCACTGAGCT
TCGAGAGCAAGAACTTGGTCGCTCCCTCAATATTCTTCTTAAATATCTCC
TGCCTCTCCTCACTCAGCTTGGGCGTCAGCAACTTGATGAATCTCTTCAT
GTATGTTACAAACGGCTTCTTGTCAAAAGCGGGTTGCTCCTGTAGCCTGA
ATGTGTCGACAATGTCAACCACCTTCACGGCTTGGTCATCAACACCCTCA
TCCTCATCAGCTCCTTCGGCAGAAGGATTTGCACCAATGTCAACATCAAC
GGCTCCTTGTACAACCCACTTTCCCTCAACTTCCCACAGAATCCCATTCT
CAATTTCCTTGTAGGGAAAAGAATCGGAGAGAAGCTCATCACCGGTGAGG
AGATCTTGATAGA
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