CN188357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBS (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain SDF) GN=dnaJ PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.543e-18 Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 3 Query: 141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377 YYE+LGVSK AS +++KKAY+K A+K HPD+ D EKFKE ++AYE+LSD EKR +YD+ G +A + G GG G F Sbjct: 6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGF 88
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBC (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ACICU) GN=dnaJ PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.543e-18 Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 3 Query: 141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377 YYE+LGVSK AS +++KKAY+K A+K HPD+ D EKFKE ++AYE+LSD EKR +YD+ G +A + G GG G F Sbjct: 6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGF 88
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB5 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB0057) GN=dnaJ PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.543e-18 Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 3 Query: 141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377 YYE+LGVSK AS +++KKAY+K A+K HPD+ D EKFKE ++AYE+LSD EKR +YD+ G +A + G GG G F Sbjct: 6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGF 88
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB3 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB307-0294) GN=dnaJ PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.543e-18 Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 3 Query: 141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377 YYE+LGVSK AS +++KKAY+K A+K HPD+ D EKFKE ++AYE+LSD EKR +YD+ G +A + G GG G F Sbjct: 6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGF 88
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_YERE8 (Chaperone protein dnaJ OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=dnaJ PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 62/195 (31.79%), Postives = 93/195 (47.69%), Query Frame = 3 Query: 141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP----EKFKELAQAYEVLSDPEKREIYDQYGEDALKE-GMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSL-SRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 707 YYE+LGV K+A ++KKAYK+ A+K HPD+ D E FKE+ +AYE+L+DP+KR YDQYG A ++ GMGGG D D+ + + ++LE+ G +K++ + + N +G G +V +R G +QQ C C G+G+ I D Sbjct: 6 YYEVLGVKKDADEREIKKAYKRLAVKYHPDRNQDENDTGENFKEVKEAYEILTDPQKRAAYDQYGHAAFEQGGMGGGGFGGGGADFTDIFGDVFGDIFGGGRRQRASRGSDLRYNMDLTLEEAVRGVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAG-QVHMRQ-GFFTVQQ---ACPTCHGSGQIIKD 195
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_THIDA (Chaperone protein dnaJ OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dnaJ PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 67/200 (33.50%), Postives = 93/200 (46.50%), Query Frame = 3 Query: 141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDAL--KEGMGGGAGAHDPF-DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQ----MQHPCNECKGTGETIND 707 YYE+LGV+KNAS E++KKAY+K A+K+HPD+ GD +KFKE QAYE+LSD +KR YDQ+G + + GMGGG F D D+ + L++ LE+ GT K+ + Q T H G +QQ +Q C C GTG+ ++D Sbjct: 6 YYEVLGVAKNASDEEIKKAYRKLAMKHHPDRNPGDHAAEDKFKEAKQAYEILSDSDKRAAYDQFGHAGVDPQSGMGGGGFGGGGFSDAFSDIFGDIFGGGGGNRRDRVYRGADLRYNLEIGLEEAARGTETKIRI-------PTLEECGTCHGSGAKPGTQPTTCSACGGH-GQVRVQQGFFSVQQTCPRCGGTGKMVSD 197
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_STAEQ (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=dnaJ PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 59/196 (30.10%), Postives = 94/196 (47.96%), Query Frame = 3 Query: 141 YYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG-GAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRH---LGPSMIQQMQHPCNECKGTGETIND 707 YYE+LGV+K+AS +++KKAY+K + K HPD + G EKFKE+++AYEVLSD KR YDQ+G D + G G G G D +D+ + + ++ E+ GT K++S+ ++V +VS+ LG +Q+ C +C+G+G+ + Sbjct: 6 YYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRVNYDQFGHDGPQGGFGSQGFGGSDFGGFEDIFSSFFGGGSRQRDPNAPRKGDDLQYTMTITFEEAVFGTKKEISIKKDVTCHTCNGDGAKPGTSKKTCSYCNGAGRVSVEQNTILGRVRTEQV---CPKCEGSGQEFEE 198
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_CUPTR (Chaperone protein dnaJ OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dnaJ PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP----EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAG 362 YYE+LGV KNAS +++KKAY+K A+K HPD+ D EKFKE +AYE+LSDPEK+ YDQYG + M GG G Sbjct: 6 YYEVLGVGKNASDDEIKKAYRKLAMKFHPDRNPDSKDAEEKFKEAKEAYEMLSDPEKKAAYDQYGHAGVDPNMAGGFG 83
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPE (Chaperone protein dnaJ OS=Bordetella pertussis GN=dnaJ PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = 3 Query: 141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEGMGGGAG 362 YYE+LGV+KNAS EDLKKAY+K A+K HPD+ D EKFKE +AYEVL D +KR YD+YG D GMGGG G Sbjct: 6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNAAGMGGGMG 86
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPA (Chaperone protein dnaJ OS=Bordetella parapertussis GN=dnaJ PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = 3 Query: 141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEGMGGGAG 362 YYE+LGV+KNAS EDLKKAY+K A+K HPD+ D EKFKE +AYEVL D +KR YD+YG D GMGGG G Sbjct: 6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNAAGMGGGMG 86 The following BLAST results are available for this feature:
BLAST of CN188357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188357 ID=CN188357; Name=CN188357; organism=Citrus sinensis; type=EST; length=720bpback to top |