CN188357

Overview
NameCN188357
Unique NameCN188357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.537e-26
Identity = 77/225 (34.22%), Postives = 105/225 (46.67%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP------EKFKELAQAYEVLSDPEKREIYDQYGEDALKE----------------GMGGGAGAH-------DPFD--IXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRN-VIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 719
            YYE LGV  + + ++LKKAY+K A+K HPDK   P       KFK++++AYEVLSDPEKR++YD YG + +KE                G GGG G         D F                           ED+ H +  SLE+LY G   K+S+SR+ V                      G+      + +GP MIQQ+Q  C+ C GTGE I ++D+C
Sbjct:    7 YYERLGVKPDCTEDELKKAYRKMAVKYHPDKNQGPGKDAAEAKFKDISEAYEVLSDPEKRKMYDSYGSEGMKESGFHASSAEDLFSHFFGAGGGGGGFSFGGGGGDDFGGFSFGNMGGMGGMGGMGGGHKKRRKGEDIEHEMNRSLEELYNGKLVKISISRDEVCKTCKGSGSNKPGVTTTCPTCNGSRYVFQKKQVGPGMIQQVQTACHTCHGTGEKIKEEDKC 231          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: SCJ1_YEAST (DnaJ-related protein SCJ1 OS=Saccharomyces cerevisiae GN=SCJ1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23
Identity = 68/202 (33.66%), Postives = 100/202 (49.50%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGG-------AGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVH-PLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK 710
            YY IL + K+A+ +++K AY++ + K HPDK    E    KF E+ +AY+VLSDPEK++IYDQ+G DA+K G GGG        G HDPFDI                         ++    K+SL+  Y G+S + +L+ N                      QG G+ + +  +G  M QQ+Q  C  C GTG+ I ++
Sbjct:   24 YYAILEIDKDATEKEIKSAYRQLSKKYHPDKNAGSEEAHQKFIEVGEAYDVLSDPEKKKIYDQFGADAVKNGGGGGGPGGPGAGGFHDPFDIFERMFQGGHGGPGGGFGQRQRQRGPMIKVQEKLSLKQFYSGSSIEFTLNLNDECDACHGSGSADGKLAQCPDCQGRGVIIQVLRMG-IMTQQIQQMCGRCGGTGQIIKNE 224          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: XDJ1_SCHPO (DnaJ protein homolog xdj1 OS=Schizosaccharomyces pombe GN=xdj1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22
Identity = 63/204 (30.88%), Postives = 94/204 (46.08%), Query Frame = 3
Query:  132 NTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPEK------FKELAQAYEVLSDPEKREIYDQYGEDA-LKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVI-XXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 719
            +T+ Y+IL V   ASAE++KK+YK+ A+ +HPDK    EK      F+ + +AY++L DPE RE+YD YG ++       GG    D                            DV+H  ++SLED++ G   KL  +RN +                      G G+K  ++H+GP  +   Q  C+ C G G +   KDRC
Sbjct:    4 DTKLYDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDPESREMYDMYGMNSDSNSQFDGGVNLDDVLAQMFGMNFEAGGPGKNVPRDRKRRGSDVIHDYEISLEDMFKGKEVKLRATRNTLCPRCQGRGGKRFAKEKPCLSCDGKGVKQHLKHVGPHHVTNSQVICDTCNGKGVSFRGKDRC 207          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22
Identity = 52/82 (63.41%), Postives = 61/82 (74.39%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377
            YY ILG+ K AS ED+KKAY+K A+K HPDK   P   EKFKE+A+AYEVLSDP+KREIYDQ+GE+ LK G GG  G    F
Sbjct:    5 YYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQGGTF 86          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22
Identity = 51/82 (62.20%), Postives = 61/82 (74.39%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377
            YY ILG+ K A+ ED+KKAY+K A+K HPDK   P   EKFKE+A+AYEVLSDP+KREIYDQ+GE+ LK G GG  G    F
Sbjct:    5 YYHILGIDKGATDEDVKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQGGTF 86          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22
Identity = 52/82 (63.41%), Postives = 61/82 (74.39%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377
            YY ILG+ K AS ED+KKAY+K A+K HPDK   P   EKFKE+A+AYEVLSDP+KREIYDQ+GE+ LK G GG  G    F
Sbjct:    5 YYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQGGTF 86          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_SACD2 (Chaperone protein dnaJ OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.103e-21
Identity = 70/195 (35.90%), Postives = 95/195 (48.72%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDAL--KEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 707
            YYE+LGVSK+ S ++LKKAY+K A+K HPD+  D     +KFKE ++AYEVLSD +KR  YDQYG   +    GMGGGAGA +  DI                        D+ + L +SLED   GT+ K+ +   V                      G   +V ++  G   +QQ    C  C+G G+ I D
Sbjct:    6 YYEVLGVSKDVSPQELKKAYRKVAMKYHPDRNSDDPNSEDKFKEASEAYEVLSDAQKRAAYDQYGHAGVDGNAGMGGGAGAGNFSDIFGDVFGDIFGGGGGRRRGGPSRGSDLRYTLDLSLEDAVKGTTVKIRVPTLVSCKPCGGSGAKPGTSPQTCTTCGGHGQVRMQQ-GFFSVQQ---TCPNCRGQGKMITD 196          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21
Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377
            YY ILG+ K AS ED+KKAY+K A++ HPDK   P   E+FKE+A+AYEVLSDP+KREIYDQ+GE+ LK G GG  G    F
Sbjct:    5 YYCILGIEKGASDEDIKKAYRKQALRFHPDKNKSPQAEERFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQGGTF 86          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB6_BOVIN (DnaJ homolog subfamily B member 6 OS=Bos taurus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20
Identity = 47/85 (55.29%), Postives = 65/85 (76.47%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE-----KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFD 380
            YYE+LGV ++ASAED+KKAY+K A+K HPDK  + +     KFK++A+AYEVLSD +KR+IYD+YG++ L  G GGG+    PF+
Sbjct:    4 YYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDRYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.717e-20
Identity = 45/82 (54.88%), Postives = 61/82 (74.39%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377
            YY+ILG+   A+ +++KKAY+K A+K HPDK  +P   EKFKE+A+AY+VLSDP+KR +YDQYGE+ LK G G   G+   F
Sbjct:    5 YYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRSLYDQYGEEGLKTGGGSSGGSGGSF 86          
The following BLAST results are available for this feature:
BLAST of CN188357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJA1_DICDI2.537e-2634.22DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
SCJ1_YEAST2.626e-2333.66DnaJ-related protein SCJ1 OS=Saccharomyces cerevis... [more]
XDJ1_SCHPO2.903e-2230.88DnaJ protein homolog xdj1 OS=Schizosaccharomyces p... [more]
DNJB4_PONAB8.447e-2263.41DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_MOUSE8.447e-2262.20DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNJB4_HUMAN8.447e-2263.41DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNAJ_SACD21.103e-2135.90Chaperone protein dnaJ OS=Saccharophagus degradans... [more]
DNJB4_BOVIN4.192e-2160.98DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNJB6_BOVIN2.081e-2055.29DnaJ homolog subfamily B member 6 OS=Bos taurus GN... [more]
DNJB5_MOUSE2.717e-2054.88DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188357 ID=CN188357; Name=CN188357; organism=Citrus sinensis; type=EST; length=720bp
GACGGGCTTTTGGGGGCTCTCCTGTAGCGTTCTCCGCGAGAAAAATAATT
TTCTGGGTCTGTTTCGTTTCTGTGGATTCCTGTTAAGAAACTCAAAACAA
GATGTTTGGAAGAGCACCGAAGAAGAGCAATAATACGAGGTACTATGAGA
TCCTGGGGGTGTCCAAGAACGCTTCCGCTGAGGACTTGAAGAAGGCTTAT
AAAAAAGCTGCCATCAAGAATCATCCCGACAAGGGCGGCGATCCTGAGAA
GTTTAAAGAGTTGGCTCAGGCTTACGAGGTTCTGAGTGATCCTGAGAAGC
GTGAGATATATGATCAGTACGGTGAGGATGCACTCAAGGAAGGAATGGGT
GGTGGCGCTGGCGCCCATGACCCGTTTGATATCTTTTCGTCTTTCTTTGG
CGGCAGCCCATTCGGAGGTGGTAGCAGCAGGGGACGGAGACAGAGGCGGG
GCGAGGACGTGGTTCATCCTTTGAAGGTGTCCTTGGAGGATCTTTATCTG
GGTACCTCGAAGAAGCTCTCACTTTCGCGGAATGTGATATGCTCGAAGTG
CAGTGGCAAAGGGTCAAAATCTGGCGCTTCGATGAAGTGTTCTGGTTGCC
AAGGTACTGGTATGAAGGTCTCGATAAGGCACCTAGGACCCTCTATGATT
CAGCAGATGCAGCATCCTTGCAATGAATGCAAGGGTACCGGTGAGACCAT
CAACGATAAAGATCGCTGCC
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