CN188357

Overview
NameCN188357
Unique NameCN188357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20
Identity = 45/82 (54.88%), Postives = 61/82 (74.39%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377
            YY+ILG+   A+ +++KKAY+K A+K HPDK  +P   EKFKE+A+AY+VLSDP+KR +YDQYGE+ LK G G   G+   F
Sbjct:    5 YYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGSSGGSSGSF 86          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB6_CHICK (DnaJ homolog subfamily B member 6 OS=Gallus gallus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 46/85 (54.12%), Postives = 66/85 (77.65%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFD 380
            YYE+LGV K+ASAED+KKAY+K A+K HPDK  +      ++FK++A+AYEVLSD +KR+IYD++G++ L  G GGG+   +PF+
Sbjct:    4 YYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPENKEEAEQQFKQVAEAYEVLSDAKKRDIYDRFGKEGLINGGGGGSHHDNPFE 88          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20
Identity = 45/82 (54.88%), Postives = 61/82 (74.39%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377
            YY+ILG+   A+ +++KKAY+K A+K HPDK  +P   EKFKE+A+AY+VLSDP+KR +YDQYGE+ LK G G   G+   F
Sbjct:    5 YYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGTSGGSSGSF 86          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCPE (Chaperone protein dnaJ OS=Mycoplasma penetrans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 7.284e-20
Identity = 47/89 (52.81%), Postives = 65/89 (73.03%), Query Frame = 3
Query:  126 SNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDI 383
            S+   YYE+LGVSK+A+ + +K A++K A++ HPD+  +P   EKFKE+ QAYEVLSDP+KR  YD++G + +    GGGAG  DPFDI
Sbjct:    2 SSKRDYYEVLGVSKDATDDQIKSAFRKKAMQYHPDRNKEPDAEEKFKEVNQAYEVLSDPDKRANYDRFGHEGVDGQFGGGAG-FDPFDI 89          

HSP 2 Score: 21.557 bits (44), Expect = 7.284e-20
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  449 GRGRGSSFEGVLGGS 493
            GRG G+ FE   GGS
Sbjct:   97 GRGGGAHFEQSFGGS 111          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB6_PONAB (DnaJ homolog subfamily B member 6 OS=Pongo abelii GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20
Identity = 46/85 (54.12%), Postives = 64/85 (75.29%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE-----KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFD 380
            YYE+LGV ++AS ED+KKAY+K A+K HPDK  + +     KFK++A+AYEVLSD +KR+IYD+YG++ L  G GGG+    PF+
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB6_MACFA (DnaJ homolog subfamily B member 6 OS=Macaca fascicularis GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20
Identity = 46/85 (54.12%), Postives = 64/85 (75.29%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE-----KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFD 380
            YYE+LGV ++AS ED+KKAY+K A+K HPDK  + +     KFK++A+AYEVLSD +KR+IYD+YG++ L  G GGG+    PF+
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB6_HUMAN (DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20
Identity = 46/85 (54.12%), Postives = 64/85 (75.29%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE-----KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFD 380
            YYE+LGV ++AS ED+KKAY+K A+K HPDK  + +     KFK++A+AYEVLSD +KR+IYD+YG++ L  G GGG+    PF+
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLAB (Chaperone protein dnaJ OS=Chlamydophila abortus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 9.472e-20
Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGA 365
            YY++LGVSK AS E++KK+Y+K A+K HPDK  GD E   +FKE+++AYEVLSDP+KRE YD+YG+D    G GG  GA
Sbjct:    3 YYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYGKDGPFAGAGGFGGA 81          

HSP 2 Score: 21.1718 bits (43), Expect = 9.472e-20
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 2
Query:  455 GRGSSFEGVLGG 490
            G GS FEG+ GG
Sbjct:  103 GSGSFFEGLFGG 114          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_SALRD (Chaperone protein dnaJ OS=Salinibacter ruber (strain DSM 13855) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19
Identity = 71/210 (33.81%), Postives = 100/210 (47.62%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG-----GAGAHDPFDI------XXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNV----IXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQH--PCNECKGTGETIND 707
            YY+ILGV ++AS +++KKAY+K A++ HPD+   DPE   KFKE ++AYEVLSDPEKR+ YDQ+G D +  G GG     G G HD  DI                              D+   L ++LE++  GT K L L + +                          GTG    IR +  S+  Q+ +  PC  C+G G  I++
Sbjct:    5 YYDILGVDEDASDKEIKKAYRKKAMEYHPDRNPDDPEAEQKFKEASEAYEVLSDPEKRQRYDQFGHDGVDSGAGGGRRGRGRGFHDIEDIFDAFSDIFGGAPGGGRGRGRSERGRGRPGSDLRVSLSLTLEEIAEGTEKNLRLQKYLECESCDGTGAEGGMGGQNFSMCPKCDGTG---EIRQVSRSVFGQVVNVQPCPRCEGEGRIIDN 211          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB6_RAT (DnaJ homolog subfamily B member 6 OS=Rattus norvegicus GN=Dnajb6 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19
Identity = 48/87 (55.17%), Postives = 66/87 (75.86%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE-----KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAH--DPFD 380
            YYE+LGV ++AS ED+KKAY+K A+K HPDK  + +     KFK++A+AYEVLSD +KR+IYD+YG++ L  G GGG G+H   PF+
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKQALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGG-GGGGGSHFDSPFE 89          
The following BLAST results are available for this feature:
BLAST of CN188357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJB5_BOVIN3.549e-2054.88DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJB6_CHICK4.635e-2054.12DnaJ homolog subfamily B member 6 OS=Gallus gallus... [more]
DNJB5_HUMAN6.053e-2054.88DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNAJ_MYCPE7.284e-2052.81Chaperone protein dnaJ OS=Mycoplasma penetrans GN=... [more]
DNJB6_PONAB7.906e-2054.12DnaJ homolog subfamily B member 6 OS=Pongo abelii ... [more]
DNJB6_MACFA7.906e-2054.12DnaJ homolog subfamily B member 6 OS=Macaca fascic... [more]
DNJB6_HUMAN7.906e-2054.12DnaJ homolog subfamily B member 6 OS=Homo sapiens ... [more]
DNAJ_CHLAB9.472e-2059.49Chaperone protein dnaJ OS=Chlamydophila abortus GN... [more]
DNAJ_SALRD1.349e-1933.81Chaperone protein dnaJ OS=Salinibacter ruber (stra... [more]
DNJB6_RAT1.761e-1955.17DnaJ homolog subfamily B member 6 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188357 ID=CN188357; Name=CN188357; organism=Citrus sinensis; type=EST; length=720bp
GACGGGCTTTTGGGGGCTCTCCTGTAGCGTTCTCCGCGAGAAAAATAATT
TTCTGGGTCTGTTTCGTTTCTGTGGATTCCTGTTAAGAAACTCAAAACAA
GATGTTTGGAAGAGCACCGAAGAAGAGCAATAATACGAGGTACTATGAGA
TCCTGGGGGTGTCCAAGAACGCTTCCGCTGAGGACTTGAAGAAGGCTTAT
AAAAAAGCTGCCATCAAGAATCATCCCGACAAGGGCGGCGATCCTGAGAA
GTTTAAAGAGTTGGCTCAGGCTTACGAGGTTCTGAGTGATCCTGAGAAGC
GTGAGATATATGATCAGTACGGTGAGGATGCACTCAAGGAAGGAATGGGT
GGTGGCGCTGGCGCCCATGACCCGTTTGATATCTTTTCGTCTTTCTTTGG
CGGCAGCCCATTCGGAGGTGGTAGCAGCAGGGGACGGAGACAGAGGCGGG
GCGAGGACGTGGTTCATCCTTTGAAGGTGTCCTTGGAGGATCTTTATCTG
GGTACCTCGAAGAAGCTCTCACTTTCGCGGAATGTGATATGCTCGAAGTG
CAGTGGCAAAGGGTCAAAATCTGGCGCTTCGATGAAGTGTTCTGGTTGCC
AAGGTACTGGTATGAAGGTCTCGATAAGGCACCTAGGACCCTCTATGATT
CAGCAGATGCAGCATCCTTGCAATGAATGCAAGGGTACCGGTGAGACCAT
CAACGATAAAGATCGCTGCC
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