CN188357

Overview
NameCN188357
Unique NameCN188357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEBR (DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=dnj-20 PE=4 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19
Identity = 46/83 (55.42%), Postives = 62/83 (74.70%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377
            +Y+ILGVSKNA+A  +KKAY+K A + HPD+  D E    KF++L+ AYEVLSD EKR +YD++GE+ + +  GGG G HDPF
Sbjct:   25 FYKILGVSKNANANQIKKAYRKQAKELHPDRNPDDEMANEKFQDLSAAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGGHDPF 107          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_THEVO (Chaperone protein dnaJ OS=Thermoplasma volcanium GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19
Identity = 72/210 (34.29%), Postives = 94/210 (44.76%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPD-----KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF-----------DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK-DRC 719
            YY+ILGV +NAS ED+KKA+++ A K HPD     K    EKFKE+++AYEVLSDPEKR IYDQ G  ++  G GG     D F           +I                        D+   L +SLE+ Y GT K++   RN I                     GTG +  +R  G   +  +   CN C G G    +K  RC
Sbjct:    5 YYKILGVDRNASEEDIKKAFRELAKKWHPDLHPDNKAEAEEKFKEISEAYEVLSDPEKRRIYDQTG--SVDFGGGGSNFNWDNFTHFSDINDIFNEIFGGNFGSDFFSGFGNRQSTRNIDLDMYTNLDISLEEAYYGTEKRIKFRRNAICPDCKGTGAKNGKLITCPTCHGTGQQRVVRGQGFFRMVTVT-TCNTCGGKGRIPEEKCPRC 211          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_STRPY (Chaperone protein dnaJ OS=Streptococcus pyogenes GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19
Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = 3
Query:  129 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFD-----IXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRN-VIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 707
            NNT YY+ LGVSK+AS +D+KKAY+K + K HPD   + G  +K+K++ +AYE LSD +KR  YDQYG    + G GGGAG    FD                             +D+ + + +S E+   G  K++S +R                         G+G+ ++I    P  + + Q  C+ C G+G+ I +
Sbjct:    2 NNTEYYDRLGVSKDASQDDIKKAYRKMSKKYHPDINKEAGAEQKYKDVQEAYETLSDSQKRAAYDQYGAAGAQGGFGGGAGGFGGFDGGGFGGFEDIFSSFFGGGGSRNPNAPRQGDDLQYRVNLSFEEAVFGVEKEVSYNREATCGTCLGSGAKPGTAPVTCRKCHGSGV-MTIDTQTPLGMMRRQVTCDICHGSGKEIKE 202          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_STRP8 (Chaperone protein dnaJ OS=Streptococcus pyogenes serotype M18 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19
Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = 3
Query:  129 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFD-----IXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRN-VIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 707
            NNT YY+ LGVSK+AS +D+KKAY+K + K HPD   + G  +K+K++ +AYE LSD +KR  YDQYG    + G GGGAG    FD                             +D+ + + +S E+   G  K++S +R                         G+G+ ++I    P  + + Q  C+ C G+G+ I +
Sbjct:    2 NNTEYYDRLGVSKDASQDDIKKAYRKMSKKYHPDINKEAGAEQKYKDVQEAYETLSDSQKRAAYDQYGAAGAQGGFGGGAGGFGGFDGGGFGGFEDIFSSFFGGGGSRNPNAPRQGDDLQYRVNLSFEEAVFGVEKEVSYNREATCGTCLGSGAKPGTAPVTCRKCHGSGV-MTIDTQTPLGMMRRQVTCDICHGSGKEIKE 202          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_STRP6 (Chaperone protein dnaJ OS=Streptococcus pyogenes serotype M6 GN=dnaJ PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19
Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = 3
Query:  129 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFD-----IXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRN-VIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 707
            NNT YY+ LGVSK+AS +D+KKAY+K + K HPD   + G  +K+K++ +AYE LSD +KR  YDQYG    + G GGGAG    FD                             +D+ + + +S E+   G  K++S +R                         G+G+ ++I    P  + + Q  C+ C G+G+ I +
Sbjct:    2 NNTEYYDRLGVSKDASQDDIKKAYRKMSKKYHPDINKEAGAEQKYKDVQEAYETLSDSQKRAAYDQYGAAGAQGGFGGGAGGFGGFDGGGFGGFEDIFSSFFGGGGSRNPNAPRQGDDLQYRVNLSFEEAVFGVEKEVSYNREATCGTCLGSGAKPGTAPVTCRKCHGSGV-MTIDTQTPLGMMRRQVTCDICHGSGKEIKE 202          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_STRP3 (Chaperone protein dnaJ OS=Streptococcus pyogenes serotype M3 GN=dnaJ PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19
Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = 3
Query:  129 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFD-----IXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRN-VIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 707
            NNT YY+ LGVSK+AS +D+KKAY+K + K HPD   + G  +K+K++ +AYE LSD +KR  YDQYG    + G GGGAG    FD                             +D+ + + +S E+   G  K++S +R                         G+G+ ++I    P  + + Q  C+ C G+G+ I +
Sbjct:    2 NNTEYYDRLGVSKDASQDDIKKAYRKMSKKYHPDINKEAGAEQKYKDVQEAYETLSDSQKRAAYDQYGAAGAQGGFGGGAGGFGGFDGGGFGGFEDIFSSFFGGGGSRNPNAPRQGDDLQYRVNLSFEEAVFGVEKEVSYNREATCGTCLGSGAKPGTAPVTCRKCHGSGV-MTIDTQTPLGMMRRQVTCDICHGSGKEIKE 202          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_STRP1 (Chaperone protein dnaJ OS=Streptococcus pyogenes serotype M1 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19
Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = 3
Query:  129 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFD-----IXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRN-VIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 707
            NNT YY+ LGVSK+AS +D+KKAY+K + K HPD   + G  +K+K++ +AYE LSD +KR  YDQYG    + G GGGAG    FD                             +D+ + + +S E+   G  K++S +R                         G+G+ ++I    P  + + Q  C+ C G+G+ I +
Sbjct:    2 NNTEYYDRLGVSKDASQDDIKKAYRKMSKKYHPDINKEAGAEQKYKDVQEAYETLSDSQKRAAYDQYGAAGAQGGFGGGAGGFGGFDGGGFGGFEDIFSSFFGGGGSRNPNAPRQGDDLQYRVNLSFEEAVFGVEKEVSYNREATCGTCLGSGAKPGTAPVTCRKCHGSGV-MTIDTQTPLGMMRRQVTCDICHGSGKEIKE 202          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_PORG3 (Chaperone protein dnaJ OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19
Identity = 74/218 (33.94%), Postives = 99/218 (45.41%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGG--AGAHDPFDI--------XXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVI-XXXXXXXXXXXXXXXXXXXXQGTGM--KVSIRHLGPSMIQQ-----------MQHPCNECKGTGETINDK 710
            YYE+LGVSKNA+ ++LKKAY+K AI+ HPDK  GD    E FKE+A+AY+VLSDPEKR  YDQ+G   L    GGG   G     DI                                D+   +K+SL D+  G  KK+ + + V+                      GTG+  +VS   LG    Q            +  PC++CKG G  I ++
Sbjct:    7 YYEVLGVSKNATDDELKKAYRKKAIQYHPDKNPGDKEAEEHFKEVAEAYDVLSDPEKRSRYDQFGHAGLGGAAGGGFSGGGMSMEDIFSRFGDLFGGFGGFGGFSDMGGSSRRRVRRGSDLRVRVKLSLADISKGVEKKVKVKKQVVCSKCRGDGTEEANGKTTCQTCHGTGVVTRVSNTFLGAMQTQSTCPTCHGEGEIITKPCSKCKGEGVEIGEE 224          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBL (Chaperone protein dnaJ OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19
Identity = 58/143 (40.56%), Postives = 77/143 (53.85%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG----GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG-GAGAHDPF--------DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSR 530
            YY+ILGVSK+A+ E++K AY+K AIK HPDK        EKFKE  +AYE+L DP+KR+ YDQ+G+  +  G GG G GA+  F        DI                        D+ + L+VSLED  LG   K+ + R
Sbjct:    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVGAGAGGFGQGAYTDFSDIFGDFGDIFGDFFGGGRGGFGGGRRSGSQRGSDLRYNLEVSLEDAALGREYKIEIPR 148          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBJ (Chaperone protein dnaJ OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19
Identity = 58/143 (40.56%), Postives = 77/143 (53.85%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG----GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG-GAGAHDPF--------DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSR 530
            YY+ILGVSK+A+ E++K AY+K AIK HPDK        EKFKE  +AYE+L DP+KR+ YDQ+G+  +  G GG G GA+  F        DI                        D+ + L+VSLED  LG   K+ + R
Sbjct:    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVGAGAGGFGQGAYTDFSDIFGDFGDIFGDFFGGGRGGFGGGRRSGSQRGSDLRYNLEVSLEDAALGREYKIEIPR 148          
The following BLAST results are available for this feature:
BLAST of CN188357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJ20_CAEBR1.761e-1955.42DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=... [more]
DNAJ_THEVO1.761e-1934.29Chaperone protein dnaJ OS=Thermoplasma volcanium G... [more]
DNAJ_STRPY1.761e-1931.19Chaperone protein dnaJ OS=Streptococcus pyogenes G... [more]
DNAJ_STRP81.761e-1931.19Chaperone protein dnaJ OS=Streptococcus pyogenes s... [more]
DNAJ_STRP61.761e-1931.19Chaperone protein dnaJ OS=Streptococcus pyogenes s... [more]
DNAJ_STRP31.761e-1931.19Chaperone protein dnaJ OS=Streptococcus pyogenes s... [more]
DNAJ_STRP11.761e-1931.19Chaperone protein dnaJ OS=Streptococcus pyogenes s... [more]
DNAJ_PORG31.761e-1933.94Chaperone protein dnaJ OS=Porphyromonas gingivalis... [more]
DNAJ_LEPBL1.761e-1940.56Chaperone protein dnaJ OS=Leptospira borgpeterseni... [more]
DNAJ_LEPBJ1.761e-1940.56Chaperone protein dnaJ OS=Leptospira borgpeterseni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188357 ID=CN188357; Name=CN188357; organism=Citrus sinensis; type=EST; length=720bp
GACGGGCTTTTGGGGGCTCTCCTGTAGCGTTCTCCGCGAGAAAAATAATT
TTCTGGGTCTGTTTCGTTTCTGTGGATTCCTGTTAAGAAACTCAAAACAA
GATGTTTGGAAGAGCACCGAAGAAGAGCAATAATACGAGGTACTATGAGA
TCCTGGGGGTGTCCAAGAACGCTTCCGCTGAGGACTTGAAGAAGGCTTAT
AAAAAAGCTGCCATCAAGAATCATCCCGACAAGGGCGGCGATCCTGAGAA
GTTTAAAGAGTTGGCTCAGGCTTACGAGGTTCTGAGTGATCCTGAGAAGC
GTGAGATATATGATCAGTACGGTGAGGATGCACTCAAGGAAGGAATGGGT
GGTGGCGCTGGCGCCCATGACCCGTTTGATATCTTTTCGTCTTTCTTTGG
CGGCAGCCCATTCGGAGGTGGTAGCAGCAGGGGACGGAGACAGAGGCGGG
GCGAGGACGTGGTTCATCCTTTGAAGGTGTCCTTGGAGGATCTTTATCTG
GGTACCTCGAAGAAGCTCTCACTTTCGCGGAATGTGATATGCTCGAAGTG
CAGTGGCAAAGGGTCAAAATCTGGCGCTTCGATGAAGTGTTCTGGTTGCC
AAGGTACTGGTATGAAGGTCTCGATAAGGCACCTAGGACCCTCTATGATT
CAGCAGATGCAGCATCCTTGCAATGAATGCAAGGGTACCGGTGAGACCAT
CAACGATAAAGATCGCTGCC
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