CN188357

Overview
NameCN188357
Unique NameCN188357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEP1 (Chaperone protein dnaJ OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 51/130 (39.23%), Postives = 69/130 (53.08%), Query Frame = 3 
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGA---GAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTS 509
            YYE+LGV + A+  DLKKAY++ A+K HPD+  GD E   KFKE  +AYEVLSD  KR  +DQYG   +   MGGG    G  +  DI                        D+ + L+++LE+   GT+
Sbjct:    6 YYEVLGVERGATEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYGHAGVDPSMGGGGAGFGGANFSDIFGDVFSDFFGGGRGGGRGGAQRGSDLRYTLELNLEEAVRGTT 135
[Close]
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMF (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 61/202 (30.20%), Postives = 92/202 (45.54%), Query Frame = 3 
Query:  129 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF----DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSL-SRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 707
            +N  +Y  LGV++ A+ +++KKAY+K A+K HPD+  D     EKFKE+ +AYE LSD EKR +YDQYG  A + G  GG G    F                             EDV   ++++LE+   G  K++++ +                        +G+G  V I+      I +MQ  C  C G G+ I +
Sbjct:    2 SNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTSPETCPTCKGSG-TVHIQ----QAIFRMQQTCPTCHGAGKHIKE 198
[Close]
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMB (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup B GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 61/202 (30.20%), Postives = 92/202 (45.54%), Query Frame = 3 
Query:  129 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF----DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSL-SRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 707
            +N  +Y  LGV++ A+ +++KKAY+K A+K HPD+  D     EKFKE+ +AYE LSD EKR +YDQYG  A + G  GG G    F                             EDV   ++++LE+   G  K++++ +                        +G+G  V I+      I +MQ  C  C G G+ I +
Sbjct:    2 SNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTSPETCPTCKGSG-TVHIQ----QAIFRMQQTCPTCHGAGKHIKE 198
[Close]
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMA (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup A GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 61/202 (30.20%), Postives = 92/202 (45.54%), Query Frame = 3 
Query:  129 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF----DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSL-SRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 707
            +N  +Y  LGV++ A+ +++KKAY+K A+K HPD+  D     EKFKE+ +AYE LSD EKR +YDQYG  A + G  GG G    F                             EDV   ++++LE+   G  K++++ +                        +G+G  V I+      I +MQ  C  C G G+ I +
Sbjct:    2 SNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTSPETCPTCKGSG-TVHIQ----QAIFRMQQTCPTCHGAGKHIKE 198
[Close]
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIM0 (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup C (strain 053442) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 61/202 (30.20%), Postives = 92/202 (45.54%), Query Frame = 3 
Query:  129 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF----DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSL-SRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 707
            +N  +Y  LGV++ A+ +++KKAY+K A+K HPD+  D     EKFKE+ +AYE LSD EKR +YDQYG  A + G  GG G    F                             EDV   ++++LE+   G  K++++ +                        +G+G  V I+      I +MQ  C  C G G+ I +
Sbjct:    2 SNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTSPETCPTCKGSG-TVHIQ----QAIFRMQQTCPTCHGAGKHIKE 198
[Close]
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPN (Chaperone protein dnaJ OS=Legionella pneumophila GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 3 
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377
            YYE+L VS+NAS  ++KKAY++ A+K HPD+  GD    EKFKE+ +AY +LSD +KR  YDQ+G   +   MGGG G    F
Sbjct:    6 YYELLEVSRNASDAEIKKAYRRLAMKYHPDRNPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGF 88
[Close]
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPL (Chaperone protein dnaJ OS=Legionella pneumophila (strain Lens) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 3 
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377
            YYE+L VS+NAS  ++KKAY++ A+K HPD+  GD    EKFKE+ +AY +LSD +KR  YDQ+G   +   MGGG G    F
Sbjct:    6 YYELLEVSRNASDAEIKKAYRRLAMKYHPDRNPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGF 88
[Close]
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPH (Chaperone protein dnaJ OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 3 
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377
            YYE+L VS+NAS  ++KKAY++ A+K HPD+  GD    EKFKE+ +AY +LSD +KR  YDQ+G   +   MGGG G    F
Sbjct:    6 YYELLEVSRNASDAEIKKAYRRLAMKYHPDRNPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGF 88
[Close]
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPC (Chaperone protein dnaJ OS=Legionella pneumophila (strain Corby) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 3 
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377
            YYE+L VS+NAS  ++KKAY++ A+K HPD+  GD    EKFKE+ +AY +LSD +KR  YDQ+G   +   MGGG G    F
Sbjct:    6 YYELLEVSRNASDAEIKKAYRRLAMKYHPDRNPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGF 88
[Close]
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPA (Chaperone protein dnaJ OS=Legionella pneumophila (strain Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 3 
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF 377
            YYE+L VS+NAS  ++KKAY++ A+K HPD+  GD    EKFKE+ +AY +LSD +KR  YDQ+G   +   MGGG G    F
Sbjct:    6 YYELLEVSRNASDAEIKKAYRRLAMKYHPDRNPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGF 88
The following BLAST results are available for this feature:
BLAST of CN188357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PSEP16.926e-1639.23Chaperone protein dnaJ OS=Pseudomonas putida (stra... [more]
DNAJ_NEIMF6.926e-1630.20Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIMB6.926e-1630.20Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIMA6.926e-1630.20Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIM06.926e-1630.20Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_LEGPN6.926e-1650.60Chaperone protein dnaJ OS=Legionella pneumophila G... [more]
DNAJ_LEGPL6.926e-1650.60Chaperone protein dnaJ OS=Legionella pneumophila (... [more]
DNAJ_LEGPH6.926e-1650.60Chaperone protein dnaJ OS=Legionella pneumophila s... [more]
DNAJ_LEGPC6.926e-1650.60Chaperone protein dnaJ OS=Legionella pneumophila (... [more]
DNAJ_LEGPA6.926e-1650.60Chaperone protein dnaJ OS=Legionella pneumophila (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188357 ID=CN188357; Name=CN188357; organism=Citrus sinensis; type=EST; length=720bp
GACGGGCTTTTGGGGGCTCTCCTGTAGCGTTCTCCGCGAGAAAAATAATT
TTCTGGGTCTGTTTCGTTTCTGTGGATTCCTGTTAAGAAACTCAAAACAA
GATGTTTGGAAGAGCACCGAAGAAGAGCAATAATACGAGGTACTATGAGA
TCCTGGGGGTGTCCAAGAACGCTTCCGCTGAGGACTTGAAGAAGGCTTAT
AAAAAAGCTGCCATCAAGAATCATCCCGACAAGGGCGGCGATCCTGAGAA
GTTTAAAGAGTTGGCTCAGGCTTACGAGGTTCTGAGTGATCCTGAGAAGC
GTGAGATATATGATCAGTACGGTGAGGATGCACTCAAGGAAGGAATGGGT
GGTGGCGCTGGCGCCCATGACCCGTTTGATATCTTTTCGTCTTTCTTTGG
CGGCAGCCCATTCGGAGGTGGTAGCAGCAGGGGACGGAGACAGAGGCGGG
GCGAGGACGTGGTTCATCCTTTGAAGGTGTCCTTGGAGGATCTTTATCTG
GGTACCTCGAAGAAGCTCTCACTTTCGCGGAATGTGATATGCTCGAAGTG
CAGTGGCAAAGGGTCAAAATCTGGCGCTTCGATGAAGTGTTCTGGTTGCC
AAGGTACTGGTATGAAGGTCTCGATAAGGCACCTAGGACCCTCTATGATT
CAGCAGATGCAGCATCCTTGCAATGAATGCAAGGGTACCGGTGAGACCAT
CAACGATAAAGATCGCTGCC
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