CN188357

Overview
NameCN188357
Unique NameCN188357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEB9 (Chaperone protein dnaJ OS=Shewanella baltica (strain OS195) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 61/202 (30.20%), Postives = 89/202 (44.06%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETIND 707
            YYE+LGVS++ S  ++KKAYK+ A+K HPD+  GD      FKE+ +AYE+L+D +K+  YDQ+G    D  + G G G G  D  DI                        D+ + L++SLE+   G +K+L +                         +GT         G   +Q       +Q PC  C G G+ I D
Sbjct:    6 YYEVLGVSRDTSEREIKKAYKRLAMKFHPDRNPGDKTAEANFKEIKEAYEILTDADKKAAYDQFGHAGVDPNRGGGGYGGGQGDFGDIFGDVFGDIFGGGRRGGQRQAARGSDLRYNLELSLEEAVKGLTKELRI----------PTLATCDLCEGSGAKKGTSATTCGTCHGQGQVQMRQGFFAVQQPCPTCHGRGKIIKD 197          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEB8 (Chaperone protein dnaJ OS=Shewanella baltica (strain OS185) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 61/202 (30.20%), Postives = 89/202 (44.06%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETIND 707
            YYE+LGVS++ S  ++KKAYK+ A+K HPD+  GD      FKE+ +AYE+L+D +K+  YDQ+G    D  + G G G G  D  DI                        D+ + L++SLE+   G +K+L +                         +GT         G   +Q       +Q PC  C G G+ I D
Sbjct:    6 YYEVLGVSRDTSEREIKKAYKRLAMKFHPDRNPGDKTAEANFKEIKEAYEILTDADKKAAYDQFGHAGVDPNRGGGGYGGGQGDFGDIFGDVFGDIFGGGRRGGQRQAARGSDLRYNLELSLEEAVKGLTKELRI----------PTLATCDLCEGSGAKKGTSATTCGTCHGQGQVQMRQGFFAVQQPCPTCHGRGKIIKD 197          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEB5 (Chaperone protein dnaJ OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 61/202 (30.20%), Postives = 89/202 (44.06%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETIND 707
            YYE+LGVS++ S  ++KKAYK+ A+K HPD+  GD      FKE+ +AYE+L+D +K+  YDQ+G    D  + G G G G  D  DI                        D+ + L++SLE+   G +K+L +                         +GT         G   +Q       +Q PC  C G G+ I D
Sbjct:    6 YYEVLGVSRDTSEREIKKAYKRLAMKFHPDRNPGDKTAEANFKEIKEAYEILTDADKKAAYDQFGHAGVDPNRGGGGYGGGQGDFGDIFGDVFGDIFGGGRRGGQRQAARGSDLRYNLELSLEEAVKGLTKELRI----------PTLATCDLCEGSGAKKGTSATTCGTCHGQGQVQMRQGFFAVQQPCPTCHGRGKIIKD 197          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEB2 (Chaperone protein dnaJ OS=Shewanella baltica (strain OS223) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 61/202 (30.20%), Postives = 89/202 (44.06%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETIND 707
            YYE+LGVS++ S  ++KKAYK+ A+K HPD+  GD      FKE+ +AYE+L+D +K+  YDQ+G    D  + G G G G  D  DI                        D+ + L++SLE+   G +K+L +                         +GT         G   +Q       +Q PC  C G G+ I D
Sbjct:    6 YYEVLGVSRDTSEREIKKAYKRLAMKFHPDRNPGDKTAEANFKEIKEAYEILTDADKKAAYDQFGHAGVDPNRGGGGYGGGQGDFGDIFGDVFGDIFGGGRRGGQRQAARGSDLRYNLELSLEEAVKGLTKELRI----------PTLATCDLCEGSGAKKGTSATTCGTCHGQGQVQMRQGFFAVQQPCPTCHGRGKIIKD 197          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_RHIL3 (Chaperone protein dnaJ OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 41/79 (51.90%), Postives = 56/79 (70.89%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKE-GMGGGAG 362
            +YE LGV+K+A  ++LK A++K A+K HPDK  D +    KFKE+ +AYE+L DP+KR  YD+YG  A +  GMGGG G
Sbjct:    6 FYETLGVAKSADEKELKSAFRKLAMKYHPDKNPDDKDAERKFKEINEAYEMLKDPQKRAAYDRYGHAAFEHGGMGGGGG 84          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_RHIEC (Chaperone protein dnaJ OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 41/79 (51.90%), Postives = 56/79 (70.89%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKE-GMGGGAG 362
            +YE LGV+K+A  ++LK A++K A+K HPDK  D +    KFKE+ +AYE+L DP+KR  YD+YG  A +  GMGGG G
Sbjct:    6 FYETLGVAKSADEKELKSAFRKLAMKYHPDKNPDDKEAERKFKEINEAYEMLKDPQKRAAYDRYGHAAFEHGGMGGGGG 84          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_RHIE6 (Chaperone protein dnaJ OS=Rhizobium etli (strain CIAT 652) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 41/79 (51.90%), Postives = 56/79 (70.89%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKE-GMGGGAG 362
            +YE LGV+K+A  ++LK A++K A+K HPDK  D +    KFKE+ +AYE+L DP+KR  YD+YG  A +  GMGGG G
Sbjct:    6 FYETLGVAKSADEKELKSAFRKLAMKYHPDKNPDDKDAERKFKEINEAYEMLKDPQKRAAYDRYGHAAFEHGGMGGGGG 84          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEE4 (Chaperone protein dnaJ OS=Pseudomonas entomophila (strain L48) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 43/76 (56.58%), Postives = 52/76 (68.42%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGG 356
            +YE+LGV + AS  DLKKAY++ A+K HPD+  GD E   KFKE  +AYEVLSD  KR  YDQYG   +   MGGG
Sbjct:    6 FYEVLGVERGASEGDLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDTSKRAAYDQYGHAGVDPSMGGG 81          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_DICNV (Chaperone protein dnaJ OS=Dichelobacter nodosus (strain VCS1703A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 56/199 (28.14%), Postives = 93/199 (46.73%), Query Frame = 3
Query:  144 YEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF-DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQ----------MQHPCNECKGTG 692
            Y ILGV + A+ +++KKAY+K ++K HPD+  +      EKFKE+ +AYE+LSD +KR  YD++G DA  +G  GG  +   F DI                        D+ + +++SLE+   G  K++ ++  V                          +V ++    S+ Q           +++PCN+C+GTG
Sbjct:    7 YAILGVCRTANQDEIKKAYRKLSMKWHPDRNPNNKEEAEEKFKEINKAYEILSDSQKRASYDRFGFDAANQGAAGGGFSGGNFSDIFGDVFGDIFGNVRQTNGARQTRGHDLAYKIELSLEEAIHGVEKQIRIATQVRCGECHGSGMNAKSKKKTCPTCNGAGQVRMQQGFFSIAQPCPTCHGRGEIIENPCNKCQGTG 205          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_CHRSD (Chaperone protein dnaJ OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 49/145 (33.79%), Postives = 74/145 (51.03%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP----EKFKELAQAYEVLSDPEKREIYDQYGEDALK---------EGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNV 536
            YYE+LG+ + A  +++KKAY++ A K HPD+  D     EKF+E+++AYEVL+D EKR  YDQ+G   +           G GGGAG     DI                        D+ + L++ LED   GT+  + + R++
Sbjct:    6 YYEVLGIERGADQKEIKKAYRRLAQKYHPDRNPDDDTAAEKFREVSEAYEVLTDEEKRSAYDQFGHAGVDGQAGGGFGGGGFGGGAGGFS--DIFGDVFGDIFGGGGRRNPNAPQRGSDLRYNLELDLEDAVAGTTVDIRVPRHI 148          
The following BLAST results are available for this feature:
BLAST of CN188357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_SHEB99.046e-1630.20Chaperone protein dnaJ OS=Shewanella baltica (stra... [more]
DNAJ_SHEB89.046e-1630.20Chaperone protein dnaJ OS=Shewanella baltica (stra... [more]
DNAJ_SHEB59.046e-1630.20Chaperone protein dnaJ OS=Shewanella baltica (stra... [more]
DNAJ_SHEB29.046e-1630.20Chaperone protein dnaJ OS=Shewanella baltica (stra... [more]
DNAJ_RHIL39.046e-1651.90Chaperone protein dnaJ OS=Rhizobium leguminosarum ... [more]
DNAJ_RHIEC9.046e-1651.90Chaperone protein dnaJ OS=Rhizobium etli (strain C... [more]
DNAJ_RHIE69.046e-1651.90Chaperone protein dnaJ OS=Rhizobium etli (strain C... [more]
DNAJ_PSEE49.046e-1656.58Chaperone protein dnaJ OS=Pseudomonas entomophila ... [more]
DNAJ_DICNV9.046e-1628.14Chaperone protein dnaJ OS=Dichelobacter nodosus (s... [more]
DNAJ_CHRSD9.046e-1633.79Chaperone protein dnaJ OS=Chromohalobacter salexig... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188357 ID=CN188357; Name=CN188357; organism=Citrus sinensis; type=EST; length=720bp
GACGGGCTTTTGGGGGCTCTCCTGTAGCGTTCTCCGCGAGAAAAATAATT
TTCTGGGTCTGTTTCGTTTCTGTGGATTCCTGTTAAGAAACTCAAAACAA
GATGTTTGGAAGAGCACCGAAGAAGAGCAATAATACGAGGTACTATGAGA
TCCTGGGGGTGTCCAAGAACGCTTCCGCTGAGGACTTGAAGAAGGCTTAT
AAAAAAGCTGCCATCAAGAATCATCCCGACAAGGGCGGCGATCCTGAGAA
GTTTAAAGAGTTGGCTCAGGCTTACGAGGTTCTGAGTGATCCTGAGAAGC
GTGAGATATATGATCAGTACGGTGAGGATGCACTCAAGGAAGGAATGGGT
GGTGGCGCTGGCGCCCATGACCCGTTTGATATCTTTTCGTCTTTCTTTGG
CGGCAGCCCATTCGGAGGTGGTAGCAGCAGGGGACGGAGACAGAGGCGGG
GCGAGGACGTGGTTCATCCTTTGAAGGTGTCCTTGGAGGATCTTTATCTG
GGTACCTCGAAGAAGCTCTCACTTTCGCGGAATGTGATATGCTCGAAGTG
CAGTGGCAAAGGGTCAAAATCTGGCGCTTCGATGAAGTGTTCTGGTTGCC
AAGGTACTGGTATGAAGGTCTCGATAAGGCACCTAGGACCCTCTATGATT
CAGCAGATGCAGCATCCTTGCAATGAATGCAAGGGTACCGGTGAGACCAT
CAACGATAAAGATCGCTGCC
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