CN188357

Overview
NameCN188357
Unique NameCN188357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJH_SYNY3 (DnAJ-like protein slr0093 OS=Synechocystis sp. (strain PCC 6803) GN=slr0093 PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 44/83 (53.01%), Postives = 60/83 (72.29%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG-GAGAHDP 374
            YY+ILGV+K AS  ++KK ++K A+K HPDK  GD    EKFKE+++AYEVLSDPEKR+ YDQ+G    + G  G  +G++ P
Sbjct:    9 YYQILGVTKTASEAEIKKQFRKLALKYHPDKNPGDKAAEEKFKEISEAYEVLSDPEKRQKYDQFGRYWQQAGTAGQPSGSYGP 91          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNPX (Chaperone protein dnaJ OS=Synechococcus sp. (strain WH8102) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 42/84 (50.00%), Postives = 58/84 (69.05%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDI 383
            YY++LGV ++A A+ LK+AY+  A K HPD   +P   ++FKE+ +AYEVLSDP+ R  YDQ+GE     G+GG AGA D  D+
Sbjct:    4 YYDLLGVGRDADADTLKRAYRSKARKYHPDINKEPGAEDRFKEIGRAYEVLSDPQTRARYDQFGE----AGLGGAAGASDMGDM 83          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAU (Chaperone protein dnaJ OS=Staphylococcus aureus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 51/150 (34.00%), Postives = 78/150 (52.00%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMG---------------GGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNV 536
            YYE+LG+SK+AS +++KKAY+K + K HPD   + G  EKFKE+++AYEVLSD  KR   DQ+G D   +G G               GG G  D F                         +D+ + + ++ E+   GT+K++S+ ++V
Sbjct:    6 YYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRATIDQFGHDG-PQGFGGQGFNGSDFGGFSGFGGGGFEDIFS-------SFFGGGSQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDV 147          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_SHESA (Chaperone protein dnaJ OS=Shewanella sp. (strain ANA-3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 65/199 (32.66%), Postives = 94/199 (47.24%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKL---SLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 707
            YYE+LGV ++AS  ++KKAYK+ A+K HPD+  GD      FKE+ +AYE+L+D  K+  YDQ+G    D  + G GG  GA D  DI                        D+ + L++SLE+   G +K+L   +L+   +                    QG   +V +R  G   +QQ   PC  C G G+ I D
Sbjct:    6 YYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEVKEAYEILTDANKKAAYDQFGHAGVDPNRGGGGGYGGAGDFGDIFGDVFGDIFGGGRRGGQRQAARGSDLRYNLELSLEEAVKGLTKELRIPTLASCDVCDGSGAKKGSSATTCGTCHGQG---QVQMRQ-GFFTVQQ---PCPTCHGRGKIIKD 197          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOS7 (Chaperone protein dnaJ OS=Rhodopseudomonas sp. (strain No.7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 63/208 (30.29%), Postives = 92/208 (44.23%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEG-MGGGAGAHDPF--DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHL------GPSMIQQMQ------HPCNECKGTGETIND 707
            YYE L V +NA    LK A++K A+K HPD+  GDP+   KFKE+ +AYEVL D +KR  YD+YG  A ++G  GGGAG    F                            D+ + ++++LED + G + ++ +  +V                      GTG K   +        G   ++Q Q        C  C+G G+TI D
Sbjct:    8 YYETLEVERNADDSTLKSAFRKLAMKWHPDRNPGDPQCEIKFKEINEAYEVLKDGDKRAAYDRYGHAAFEQGGFGGGAGFGAGFASSFSDIFEDLFGMAAQRGRGTGRERGADLRYNMEITLEDAFKGKTAQIEIPVSVTCEAC----------------SGTGAKAGTKPKTCSTCGGAGRVRQAQGFFTLERTCPSCQGRGQTIED 199          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOPT (Chaperone protein dnaJ OS=Rhodopseudomonas palustris (strain TIE-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 63/208 (30.29%), Postives = 92/208 (44.23%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEG-MGGGAGAHDPF--DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHL------GPSMIQQMQ------HPCNECKGTGETIND 707
            YYE L V +NA    LK A++K A+K HPD+  GDP+   KFKE+ +AYEVL D +KR  YD+YG  A ++G  GGGAG    F                            D+ + ++++LED + G + ++ +  +V                      GTG K   +        G   ++Q Q        C  C+G G+TI D
Sbjct:    8 YYETLEVERNADDSTLKSAFRKLAMKWHPDRNPGDPQCEIKFKEINEAYEVLKDGDKRAAYDRYGHAAFEQGGFGGGAGFGAGFASSFSDIFEDLFGMAAQRGRGTGRERGADLRYNMEITLEDAFKGKTAQIEIPVSVTCEAC----------------SGTGAKAGTKPKTCSTCGGAGRVRQAQGFFTLERTCPSCQGRGQTIED 199          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOPA (Chaperone protein dnaJ OS=Rhodopseudomonas palustris GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 63/208 (30.29%), Postives = 92/208 (44.23%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEG-MGGGAGAHDPF--DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHL------GPSMIQQMQ------HPCNECKGTGETIND 707
            YYE L V +NA    LK A++K A+K HPD+  GDP+   KFKE+ +AYEVL D +KR  YD+YG  A ++G  GGGAG    F                            D+ + ++++LED + G + ++ +  +V                      GTG K   +        G   ++Q Q        C  C+G G+TI D
Sbjct:    8 YYETLEVERNADDSTLKSAFRKLAMKWHPDRNPGDPQCEIKFKEINEAYEVLKDGDKRAAYDRYGHAAFEQGGFGGGAGFGAGFASSFSDIFEDLFGMAAQRGRGTGRERGADLRYNMEITLEDAFKGKTAQIEIPVSVTCEAC----------------SGTGAKAGTKPKTCSTCGGAGRVRQAQGFFTLERTCPSCQGRGQTIED 199          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_RHILE (Chaperone protein dnaJ (Fragment) OS=Rhizobium leguminosarum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 41/79 (51.90%), Postives = 56/79 (70.89%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKE-GMGGGAG 362
            +YE LGV+K+A  ++LK A++K A+K HPDK  D +    KFKE+ +AYE+L DP+KR  YD+YG  A +  GMGGG G
Sbjct:    6 FYETLGVAKSADEKELKSAFRKLAMKFHPDKNPDDKDAERKFKEINEAYEMLKDPQKRAAYDRYGHAAFEHGGMGGGGG 84          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_PSYIN (Chaperone protein dnaJ OS=Psychromonas ingrahamii (strain 37) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 58/201 (28.86%), Postives = 95/201 (47.26%), Query Frame = 3
Query:  144 YEILGVSKNASAEDLKKAYKKAAIKNHPDK-GGDPE---KFKELAQAYEVLSDPEKREIYDQYGEDAL-KEGMGG--GAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQ------HPCNECKGTGETIND 707
            YE+LG+S++A+ +++KKAYK+ A+K HPD+  G+ E   KFKE+ +AYE+L+D +K+  YDQYG D + ++G GG   +   D F                          D+ + ++++LE+   G SK++ +   V                     +GT  K      G   +Q  Q        C  C+G G+ I+D
Sbjct:    7 YEVLGISRDATEKEVKKAYKRLAMKYHPDRTSGNDELEVKFKEVKEAYEILNDSQKKAAYDQYGHDGVNQQGRGGFDNSDFGDQFGDIFGDIFGGGRRGGGGGGQRPQQGSDLRYNMELTLEEAVRGISKEIQIPTQV----------HCEQCNGSGAKKGTEAKTCGTCYGQGQVQMRQGFFAVNQACPTCRGQGKIISD 197          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_PROVI (Chaperone protein dnaJ OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 68/222 (30.63%), Postives = 93/222 (41.89%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDAL--KEGMGGGAGAH-----DPFDI----------------XXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQH--PCNECKGTGETINDKDRC 719
            YYEILGV ++A  +++KKAY+K A+K HPDK  D     + FKE+ +AYEVLS+ +KR  YDQ+G   +      GGGAGA+     D  DI                                        D+   LK+SLE++  G  K L + + V                      GTG    +R    +M  Q  +   C  C G G  +  KDRC
Sbjct:    5 YYEILGVGRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGAGAYGAGGADFSDIFSAFNDMFGGGGGGRGRGGFEDAFGGGQRRSRASAGIQGTDLKIRLKLSLEEIAKGVEKTLKIKKQVPCKECNGSGSKTGATETCPTCHGTG---EVRQASKTMFGQFVNIAACPTCGGEGRIV--KDRC 221          
The following BLAST results are available for this feature:
BLAST of CN188357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJH_SYNY39.046e-1653.01DnAJ-like protein slr0093 OS=Synechocystis sp. (st... [more]
DNAJ_SYNPX1.181e-1550.00Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_STAAU1.181e-1534.00Chaperone protein dnaJ OS=Staphylococcus aureus GN... [more]
DNAJ_SHESA1.181e-1532.66Chaperone protein dnaJ OS=Shewanella sp. (strain A... [more]
DNAJ_RHOS71.181e-1530.29Chaperone protein dnaJ OS=Rhodopseudomonas sp. (st... [more]
DNAJ_RHOPT1.181e-1530.29Chaperone protein dnaJ OS=Rhodopseudomonas palustr... [more]
DNAJ_RHOPA1.181e-1530.29Chaperone protein dnaJ OS=Rhodopseudomonas palustr... [more]
DNAJ_RHILE1.181e-1551.90Chaperone protein dnaJ (Fragment) OS=Rhizobium leg... [more]
DNAJ_PSYIN1.181e-1528.86Chaperone protein dnaJ OS=Psychromonas ingrahamii ... [more]
DNAJ_PROVI1.181e-1530.63Chaperone protein dnaJ OS=Prosthecochloris vibriof... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188357 ID=CN188357; Name=CN188357; organism=Citrus sinensis; type=EST; length=720bp
GACGGGCTTTTGGGGGCTCTCCTGTAGCGTTCTCCGCGAGAAAAATAATT
TTCTGGGTCTGTTTCGTTTCTGTGGATTCCTGTTAAGAAACTCAAAACAA
GATGTTTGGAAGAGCACCGAAGAAGAGCAATAATACGAGGTACTATGAGA
TCCTGGGGGTGTCCAAGAACGCTTCCGCTGAGGACTTGAAGAAGGCTTAT
AAAAAAGCTGCCATCAAGAATCATCCCGACAAGGGCGGCGATCCTGAGAA
GTTTAAAGAGTTGGCTCAGGCTTACGAGGTTCTGAGTGATCCTGAGAAGC
GTGAGATATATGATCAGTACGGTGAGGATGCACTCAAGGAAGGAATGGGT
GGTGGCGCTGGCGCCCATGACCCGTTTGATATCTTTTCGTCTTTCTTTGG
CGGCAGCCCATTCGGAGGTGGTAGCAGCAGGGGACGGAGACAGAGGCGGG
GCGAGGACGTGGTTCATCCTTTGAAGGTGTCCTTGGAGGATCTTTATCTG
GGTACCTCGAAGAAGCTCTCACTTTCGCGGAATGTGATATGCTCGAAGTG
CAGTGGCAAAGGGTCAAAATCTGGCGCTTCGATGAAGTGTTCTGGTTGCC
AAGGTACTGGTATGAAGGTCTCGATAAGGCACCTAGGACCCTCTATGATT
CAGCAGATGCAGCATCCTTGCAATGAATGCAAGGGTACCGGTGAGACCAT
CAACGATAAAGATCGCTGCC
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