CN188357

Overview
NameCN188357
Unique NameCN188357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2658 contig Csv1_Contig2658:1..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_TERTT (Chaperone protein dnaJ OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.924e-19
Identity = 68/197 (34.52%), Postives = 94/197 (47.72%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP----EKFKELAQAYEVLSDPEKREIYDQYGEDAL--KEGMGGGAGAHDPFD--IXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 707
            YYE+LGV+++ S +DLKKAY+K A+K HPD+  D     EKFKE ++AYEVLSD +KR  YDQ+G   +  + GMGGGA     F                            D+ + L +SLED   GTS K+ +   V                      G   +V ++  G   +QQ    C  C+G G+TI+D
Sbjct:    6 YYEVLGVARDVSEQDLKKAYRKVAMKFHPDRNPDDASAEEKFKEASEAYEVLSDKQKRAAYDQFGHAGVEGQGGMGGGAEGFGSFSDIFGDVFGDIFGGAGGGRGRGGPSRGADLRYTLDLSLEDAVRGTSVKIKVPTLVSCTNCGGSGAKPGTTATTCNTCGGHGQVRMQQ-GFFSVQQ---TCPTCRGQGKTISD 198          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_PORGI (Chaperone protein dnaJ OS=Porphyromonas gingivalis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.924e-19
Identity = 73/218 (33.49%), Postives = 99/218 (45.41%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGG--AGAHDPFDI--------XXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVI-XXXXXXXXXXXXXXXXXXXXQGTGM--KVSIRHLGPSMIQQ-----------MQHPCNECKGTGETINDK 710
            YYE+LGVSKNA+ ++LKKAY+K AI+ HPDK  GD    E FKE+A+AY+VLSDP+KR  YDQ+G   L    GGG   G     DI                                D+   +K+SL D+  G  KK+ + + V+                      GTG+  +VS   LG    Q            +  PC++CKG G  I ++
Sbjct:    7 YYEVLGVSKNATDDELKKAYRKKAIQYHPDKNPGDKEAEEHFKEVAEAYDVLSDPQKRSQYDQFGHAGLGGAAGGGFSGGGMSMEDIFSRFGDLFGGFGGFGGFSDMGGGSRRRVRRGSDLRVRVKLSLADISKGVEKKVKVKKQVVCSKCRGDGTEEANGKTTCQTCHGTGVVTRVSNTFLGAMQTQSTCPTCHGEGEIITKPCSKCKGEGVEIGEE 224          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LACLS (Chaperone protein dnaJ OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.924e-19
Identity = 63/209 (30.14%), Postives = 91/209 (43.54%), Query Frame = 3
Query:  129 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGA-----------GAHDPFD-IXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK 710
            NNT YYE LGV KNAS +++KKAY+K + K HPD   + G  +K+KE+ +AYE LSD +KR  YDQYGE     G GGG            GA   F                          +D+ + + +  E+   G  K++  +R  +                     G   ++++    P    Q Q  C+ C GTG+ I +K
Sbjct:    2 NNTEYYERLGVDKNASQDEIKKAYRKMSKKYHPDLNKEEGAEDKYKEVQEAYETLSDEQKRAAYDQYGEAGANGGFGGGGFGGASGFSGFGGASGGFGGFEDIFSSFFGGGGAQVNPNAPRQGDDLQYRINLKFEEAIFGVEKQVKYNREELCHTCDGSGAKAGTHPETCHKCGGRGQINVVRDTPLGRMQTQTTCDVCHGTGKEIKEK 210          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LACLM (Chaperone protein dnaJ OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.924e-19
Identity = 63/209 (30.14%), Postives = 91/209 (43.54%), Query Frame = 3
Query:  129 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGA-----------GAHDPFD-IXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK 710
            NNT YYE LGV KNAS +++KKAY+K + K HPD   + G  +K+KE+ +AYE LSD +KR  YDQYGE     G GGG            GA   F                          +D+ + + +  E+   G  K++  +R  +                     G   ++++    P    Q Q  C+ C GTG+ I +K
Sbjct:    2 NNTEYYERLGVDKNASQDEIKKAYRKMSKKYHPDLNKEEGAEDKYKEVQEAYETLSDEQKRAAYDQYGEAGANGGFGGGGFGGASGFSGFGGASGGFGGFEDIFSSFFGGGGAQVNPNAPRQGDDLQYRINLKFEEAIFGVEKQVKYNREELCHTCGGSGAKAGTHPETCHKCGGRGQINVVRDTPLGRMQTQTTCDVCHGTGKEIKEK 210          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLFF (Chaperone protein dnaJ OS=Chlamydophila felis (strain Fe/C-56) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.583e-19
Identity = 47/79 (59.49%), Postives = 60/79 (75.95%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGA 365
            YY++LGVSK AS E++KKAY+K A+K HPDK  GD E   +FKE+++AYEVLSD +KRE YD+YG+D    G GG  GA
Sbjct:    3 YYDVLGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGGA 81          

HSP 2 Score: 20.7866 bits (42), Expect = 4.583e-19
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 2
Query:  455 GRGSSFEGVLGG 490
            G GS FEG+ GG
Sbjct:  103 GGGSFFEGLFGG 114          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: XDJ1_YEAST (DnaJ protein homolog XDJ1 OS=Saccharomyces cerevisiae GN=XDJ1 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19
Identity = 60/208 (28.85%), Postives = 91/208 (43.75%), Query Frame = 3
Query:  138 RYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE-------KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDP---------FDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVI------XXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGE 695
            R Y++LGV+++A+ +++K AY+K A+K+HPDK  D +       KFKE+  AYE+LSDPEK+  YD YG+D      GG  G  D          F+                        +D+   + ++L+DLY+G   K  L R VI                           G G K  ++  GP ++      C +C G G+
Sbjct:    9 RLYDVLGVTRDATVQEIKTAYRKLALKHHPDKYVDQDSKEVNEIKFKEITAAYEILSDPEKKSHYDLYGDDNGAASSGGANGFGDEDFMNFFNNFFNNGSHDGNNFPGEYDAYEEGNSTSSKDIDIDISLTLKDLYMGKKLKFDLKRQVICIKCHGSGWKPKRKIHVTHDVECESCAGKGSKERLKRFGPGLVASQWVVCEKCNGKGK 216          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMF (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19
Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAG 362
            YYE+LGVSK+ASA+++KKAY+K + + HPD   + G  EKFKE+++AYE LSDP+KR  YDQYG     +G GGGAG
Sbjct:    6 YYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAG 82          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMC (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19
Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAG 362
            YYE+LGVSK+ASA+++KKAY+K + + HPD   + G  EKFKE+++AYE LSDP+KR  YDQYG     +G GGGAG
Sbjct:    6 YYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAG 82          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJ6B_XENLA (DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-B PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19
Identity = 45/85 (52.94%), Postives = 64/85 (75.29%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE-----KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHD-PF 377
            YY++LGV +N+S +D+KKAY++ A+K HPDK  D +     +FKE+A+AYEVLSD +KR+IYD+YG++ L  G GGG   +D PF
Sbjct:    4 YYDVLGVQRNSSPDDIKKAYRRLALKWHPDKNPDNKEEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLAGGGGGGGSHYDVPF 88          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_RALME (Chaperone protein dnaJ OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAG 362
            YYE+LGV KNAS +++KKAY+K A+K+HPD+  D     EKFKE+ +AYE+LSDPEK+  YDQYG   +   M GG G
Sbjct:    6 YYEVLGVGKNASDDEIKKAYRKLAMKHHPDRNPDNKEAEEKFKEVKEAYEMLSDPEKKAAYDQYGHAGVDPNMAGGFG 83          
The following BLAST results are available for this feature:
BLAST of CN188357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_TERTT3.924e-1934.52Chaperone protein dnaJ OS=Teredinibacter turnerae ... [more]
DNAJ_PORGI3.924e-1933.49Chaperone protein dnaJ OS=Porphyromonas gingivalis... [more]
DNAJ_LACLS3.924e-1930.14Chaperone protein dnaJ OS=Lactococcus lactis subsp... [more]
DNAJ_LACLM3.924e-1930.14Chaperone protein dnaJ OS=Lactococcus lactis subsp... [more]
DNAJ_CHLFF4.583e-1959.49Chaperone protein dnaJ OS=Chlamydophila felis (str... [more]
XDJ1_YEAST5.125e-1928.85DnaJ protein homolog XDJ1 OS=Saccharomyces cerevis... [more]
DNAJ_LISMF5.125e-1958.44Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISMC5.125e-1958.44Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNJ6B_XENLA6.693e-1952.94DnaJ homolog subfamily B member 6-B OS=Xenopus lae... [more]
DNAJ_RALME6.693e-1956.41Chaperone protein dnaJ OS=Ralstonia metallidurans ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188357 ID=CN188357; Name=CN188357; organism=Citrus sinensis; type=EST; length=720bp
GACGGGCTTTTGGGGGCTCTCCTGTAGCGTTCTCCGCGAGAAAAATAATT
TTCTGGGTCTGTTTCGTTTCTGTGGATTCCTGTTAAGAAACTCAAAACAA
GATGTTTGGAAGAGCACCGAAGAAGAGCAATAATACGAGGTACTATGAGA
TCCTGGGGGTGTCCAAGAACGCTTCCGCTGAGGACTTGAAGAAGGCTTAT
AAAAAAGCTGCCATCAAGAATCATCCCGACAAGGGCGGCGATCCTGAGAA
GTTTAAAGAGTTGGCTCAGGCTTACGAGGTTCTGAGTGATCCTGAGAAGC
GTGAGATATATGATCAGTACGGTGAGGATGCACTCAAGGAAGGAATGGGT
GGTGGCGCTGGCGCCCATGACCCGTTTGATATCTTTTCGTCTTTCTTTGG
CGGCAGCCCATTCGGAGGTGGTAGCAGCAGGGGACGGAGACAGAGGCGGG
GCGAGGACGTGGTTCATCCTTTGAAGGTGTCCTTGGAGGATCTTTATCTG
GGTACCTCGAAGAAGCTCTCACTTTCGCGGAATGTGATATGCTCGAAGTG
CAGTGGCAAAGGGTCAAAATCTGGCGCTTCGATGAAGTGTTCTGGTTGCC
AAGGTACTGGTATGAAGGTCTCGATAAGGCACCTAGGACCCTCTATGATT
CAGCAGATGCAGCATCCTTGCAATGAATGCAAGGGTACCGGTGAGACCAT
CAACGATAAAGATCGCTGCC
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