CN188357

Overview
NameCN188357
Unique NameCN188357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2658 contig Csv1_Contig2658:1..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEHT (Chaperone protein dnaJ OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19
Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDK-GGDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGG-----AGAHDPF 377
            YYE+LGVSK+AS  D+KKAYK+ A+K HPD+  GD E   KFKE+ +AYE+L+D +KR+ YDQYG  A ++G GGG      G H  F
Sbjct:    6 YYEVLGVSKDASERDIKKAYKRLAMKYHPDRTSGDKELETKFKEVKEAYEILTDAQKRQTYDQYGHAAFEQGGGGGGHGGFGGGHGDF 93          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMH (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19
Identity = 44/77 (57.14%), Postives = 59/77 (76.62%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAG 362
            YYE+LG+SK+ASA+++KKAY+K + + HPD   + G  EKFKE+++AYE LSDP+KR  YDQYG     +G GGGAG
Sbjct:    6 YYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAG 82          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LISIN (Chaperone protein dnaJ OS=Listeria innocua GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19
Identity = 44/77 (57.14%), Postives = 59/77 (76.62%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAG 362
            YYE+LG+SK+ASA+++KKAY+K + + HPD   + G  EKFKE+++AYE LSDP+KR  YDQYG     +G GGGAG
Sbjct:    6 YYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAG 82          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_HERAR (Chaperone protein dnaJ OS=Herminiimonas arsenicoxydans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP----EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAG 362
            +YEILG+ KNAS E++KKAY+K A+K+HPD+  D     +KFKE  +AYE+LSDP+KR+ YD+YG   +   MGGG G
Sbjct:    6 FYEILGLGKNASDEEIKKAYRKLAMKHHPDRNPDSKGAEDKFKEAKEAYEMLSDPQKRDAYDRYGHAGVDPNMGGGGG 83          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLPN (Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 46/79 (58.23%), Postives = 61/79 (77.22%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGA 365
            YY ILG+SK ASAE++KKAY+K A+K HPDK  GD    ++FKE+++AYEVLSDP+KR+ YD++G+D    G GG  GA
Sbjct:    3 YYSILGISKTASAEEIKKAYRKLAVKYHPDKNPGDAAAEKRFKEVSEAYEVLSDPQKRDSYDRFGKDGPFAGAGGFGGA 81          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 43/78 (55.13%), Postives = 62/78 (79.49%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK-EGMGGGAG 362
            YY+ LG+++ AS E++K+AY++ A++ HPDK  +P   EKFKE+A+AY+VLSDP KREI+D+YGE+ LK  G  GG+G
Sbjct:    5 YYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGSG 82          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBCM (Chaperone protein dnaJ OS=Vibrio cholerae serotype O1 (strain M66-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 63/205 (30.73%), Postives = 93/205 (45.37%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG----GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG------GAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETIND 707
            +YE+LGV ++AS  D+KKAYK+ A+K HPD+     G  EKFKE+ +AYE+L+D +K+  YDQYG  A ++G GG      G G  D  DI                        D+ + +++SLE+   G SK++ +   V                     +GT  +      G   +Q       +Q  C  C G G+ I D
Sbjct:    6 FYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKKAAYDQYGHAAFEQGAGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLV----------HCDACDGSGAKKGTSAQTCGTCHGHGQVQMRQGFFAVQQTCPTCHGKGKIIKD 200          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBCH (Chaperone protein dnaJ OS=Vibrio cholerae GN=dnaJ PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 63/205 (30.73%), Postives = 93/205 (45.37%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG----GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG------GAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETIND 707
            +YE+LGV ++AS  D+KKAYK+ A+K HPD+     G  EKFKE+ +AYE+L+D +K+  YDQYG  A ++G GG      G G  D  DI                        D+ + +++SLE+   G SK++ +   V                     +GT  +      G   +Q       +Q  C  C G G+ I D
Sbjct:    6 FYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKKAAYDQYGHAAFEQGAGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLV----------HCDACDGSGAKKGTSAQTCGTCHGHGQVQMRQGFFAVQQTCPTCHGKGKIIKD 200          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBC3 (Chaperone protein dnaJ OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 63/205 (30.73%), Postives = 93/205 (45.37%), Query Frame = 3
Query:  141 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG----GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG------GAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETIND 707
            +YE+LGV ++AS  D+KKAYK+ A+K HPD+     G  EKFKE+ +AYE+L+D +K+  YDQYG  A ++G GG      G G  D  DI                        D+ + +++SLE+   G SK++ +   V                     +GT  +      G   +Q       +Q  C  C G G+ I D
Sbjct:    6 FYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKKAAYDQYGHAAFEQGAGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLV----------HCDACDGSGAKKGTSAQTCGTCHGHGQVQMRQGFFAVQQTCPTCHGKGKIIKD 200          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ_LACLC (Chaperone protein dnaJ OS=Lactococcus lactis subsp. cremoris GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 62/209 (29.67%), Postives = 90/209 (43.06%), Query Frame = 3
Query:  129 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGA-GAHDPFD-----------IXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK 710
            NNT YYE LGV KNAS +++KKAY+K + K HPD   + G  +K+KE+ +AYE LSD +KR  YDQYGE     G GGG  G    F                                    +D+ + + +  E+   G  K++  +R  +                     G   ++++    P    Q Q  C+ C GTG+ I +K
Sbjct:    2 NNTEYYERLGVDKNASQDEIKKAYRKMSKKYHPDLNKEEGAEDKYKEVQEAYETLSDEQKRAAYDQYGEAGRNGGFGGGGFGGASGFSGFGGRSGGFGGFEDIFSSFFGGGGAQVNPNAPRQGDDLQYRINLKFEEAIFGVEKQVKYNREELCHTCGGSGAKAGTHPETCHKCGGRGQINVVRDTPLGRMQTQTTCDVCHGTGKEIKEK 210          
The following BLAST results are available for this feature:
BLAST of CN188357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PSEHT6.693e-1954.55Chaperone protein dnaJ OS=Pseudoalteromonas halopl... [more]
DNAJ_LISMH6.693e-1957.14Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISIN6.693e-1957.14Chaperone protein dnaJ OS=Listeria innocua GN=dnaJ... [more]
DNAJ_HERAR8.741e-1955.13Chaperone protein dnaJ OS=Herminiimonas arsenicoxy... [more]
DNAJ_CHLPN8.741e-1958.23Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=... [more]
DNJB1_HUMAN1.142e-1855.13DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNAJ_VIBCM1.142e-1830.73Chaperone protein dnaJ OS=Vibrio cholerae serotype... [more]
DNAJ_VIBCH1.142e-1830.73Chaperone protein dnaJ OS=Vibrio cholerae GN=dnaJ ... [more]
DNAJ_VIBC31.142e-1830.73Chaperone protein dnaJ OS=Vibrio cholerae serotype... [more]
DNAJ_LACLC1.142e-1829.67Chaperone protein dnaJ OS=Lactococcus lactis subsp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188357 ID=CN188357; Name=CN188357; organism=Citrus sinensis; type=EST; length=720bp
GACGGGCTTTTGGGGGCTCTCCTGTAGCGTTCTCCGCGAGAAAAATAATT
TTCTGGGTCTGTTTCGTTTCTGTGGATTCCTGTTAAGAAACTCAAAACAA
GATGTTTGGAAGAGCACCGAAGAAGAGCAATAATACGAGGTACTATGAGA
TCCTGGGGGTGTCCAAGAACGCTTCCGCTGAGGACTTGAAGAAGGCTTAT
AAAAAAGCTGCCATCAAGAATCATCCCGACAAGGGCGGCGATCCTGAGAA
GTTTAAAGAGTTGGCTCAGGCTTACGAGGTTCTGAGTGATCCTGAGAAGC
GTGAGATATATGATCAGTACGGTGAGGATGCACTCAAGGAAGGAATGGGT
GGTGGCGCTGGCGCCCATGACCCGTTTGATATCTTTTCGTCTTTCTTTGG
CGGCAGCCCATTCGGAGGTGGTAGCAGCAGGGGACGGAGACAGAGGCGGG
GCGAGGACGTGGTTCATCCTTTGAAGGTGTCCTTGGAGGATCTTTATCTG
GGTACCTCGAAGAAGCTCTCACTTTCGCGGAATGTGATATGCTCGAAGTG
CAGTGGCAAAGGGTCAAAATCTGGCGCTTCGATGAAGTGTTCTGGTTGCC
AAGGTACTGGTATGAAGGTCTCGATAAGGCACCTAGGACCCTCTATGATT
CAGCAGATGCAGCATCCTTGCAATGAATGCAAGGGTACCGGTGAGACCAT
CAACGATAAAGATCGCTGCC
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